RNA–Protein interactions for RNA: ENST00000467286.1

CRAMP1-205, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 664 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-205ENST00000467286 MED1Q15648 1581 aaPredicted RBP21.23■□□□□ 0.99
CRAMP1-205ENST00000467286 NUP155O75694 1391 aa21.23■□□□□ 0.99
CRAMP1-205ENST00000467286 RIMS2Q9UQ26 1411 aa21.22■□□□□ 0.99
CRAMP1-205ENST00000467286 SPHKAPQ2M3C7 1700 aa21.22■□□□□ 0.99
CRAMP1-205ENST00000467286 PPP1R15AO75807 674 aaPredicted RBP21.21■□□□□ 0.99
CRAMP1-205ENST00000467286 HDGFP51858 240 aaKnown RBP21.21■□□□□ 0.99
CRAMP1-205ENST00000467286 ILDR2Q71H61 639 aa21.21■□□□□ 0.99
CRAMP1-205ENST00000467286 BCANQ96GW7 911 aa21.21■□□□□ 0.99
CRAMP1-205ENST00000467286 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
CRAMP1-205ENST00000467286 RRBP1Q9P2E9 1410 aaKnown RBP21.21■□□□□ 0.99
CRAMP1-205ENST00000467286 SLC26A8Q96RN1 970 aa21.2■□□□□ 0.98
CRAMP1-205ENST00000467286 CHD2O14647 1828 aaKnown RBP21.2■□□□□ 0.98
CRAMP1-205ENST00000467286 KCNA6P17658 529 aa21.19■□□□□ 0.98
CRAMP1-205ENST00000467286 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
CRAMP1-205ENST00000467286 TMEM94Q12767 1356 aa21.17■□□□□ 0.98
CRAMP1-205ENST00000467286 DIP2AQ14689 1571 aa21.17■□□□□ 0.98
CRAMP1-205ENST00000467286 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.16■□□□□ 0.98
CRAMP1-205ENST00000467286 PROSER2Q86WR7 435 aaPredicted RBP21.13■□□□□ 0.97
CRAMP1-205ENST00000467286 SOCS7O14512 581 aa21.12■□□□□ 0.97
CRAMP1-205ENST00000467286 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
CRAMP1-205ENST00000467286 ROBO1Q9Y6N7 1651 aa21.11■□□□□ 0.97
CRAMP1-205ENST00000467286 MSH6P52701 1360 aa21.1■□□□□ 0.97
CRAMP1-205ENST00000467286 NAIPQ13075 1403 aa21.09■□□□□ 0.97
CRAMP1-205ENST00000467286 FAM135BQ49AJ0 1406 aa21.09■□□□□ 0.97
CRAMP1-205ENST00000467286 TRPM2O94759 1503 aa21.09■□□□□ 0.97
CRAMP1-205ENST00000467286 KIF1BO60333 1816 aa21.08■□□□□ 0.96
CRAMP1-205ENST00000467286 ADAMTS13Q76LX8 1427 aa21.07■□□□□ 0.96
CRAMP1-205ENST00000467286 TBX22Q9Y458 520 aa21.07■□□□□ 0.96
CRAMP1-205ENST00000467286 CLTCL1P53675 1640 aa21.06■□□□□ 0.96
CRAMP1-205ENST00000467286 PIK3R4Q99570 1358 aa21.06■□□□□ 0.96
CRAMP1-205ENST00000467286 NUTM2DQ5VT03 806 aaPredicted RBP21.05■□□□□ 0.96
CRAMP1-205ENST00000467286 RBM33Q96EV2 1170 aaKnown RBP21.05■□□□□ 0.96
CRAMP1-205ENST00000467286 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
CRAMP1-205ENST00000467286 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
CRAMP1-205ENST00000467286 NCOA3Q9Y6Q9 1424 aa21.04■□□□□ 0.96
CRAMP1-205ENST00000467286 SETBP1Q9Y6X0 1596 aa21.03■□□□□ 0.96
CRAMP1-205ENST00000467286 NRXN3Q9Y4C0 1643 aa21.03■□□□□ 0.96
CRAMP1-205ENST00000467286 PHLPP1O60346 1717 aa21.01■□□□□ 0.95
CRAMP1-205ENST00000467286 ZNF326Q5BKZ1 582 aaKnown RBP21■□□□□ 0.95
CRAMP1-205ENST00000467286 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.99■□□□□ 0.95
CRAMP1-205ENST00000467286 NEXMIFQ5QGS0 1516 aa20.99■□□□□ 0.95
CRAMP1-205ENST00000467286 XRN1Q8IZH2 1706 aaKnown RBP20.98■□□□□ 0.95
CRAMP1-205ENST00000467286 C14orf37Q86TY3 774 aa20.98■□□□□ 0.95
CRAMP1-205ENST00000467286 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
CRAMP1-205ENST00000467286 SLAIN2Q9P270 581 aa20.96■□□□□ 0.95
CRAMP1-205ENST00000467286 PTPRUQ92729 1446 aa20.94■□□□□ 0.94
CRAMP1-205ENST00000467286 AMOTL2Q9Y2J4 779 aa20.93■□□□□ 0.94
CRAMP1-205ENST00000467286 CADPS2Q86UW7 1296 aa20.91■□□□□ 0.94
CRAMP1-205ENST00000467286 COL16A1Q07092 1604 aaPredicted RBP20.9■□□□□ 0.94
CRAMP1-205ENST00000467286 DCCP43146 1447 aa20.9■□□□□ 0.94
CRAMP1-205ENST00000467286 ATF3P18847 181 aa20.9■□□□□ 0.94
CRAMP1-205ENST00000467286 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
CRAMP1-205ENST00000467286 C19orf44Q9H6X5 657 aa20.9■□□□□ 0.94
CRAMP1-205ENST00000467286 PPLO60437 1756 aa20.9■□□□□ 0.94
CRAMP1-205ENST00000467286 AHDC1Q5TGY3 1603 aaPredicted RBP20.88■□□□□ 0.93
CRAMP1-205ENST00000467286 SETD1AO15047 1707 aaKnown RBP20.87■□□□□ 0.93
CRAMP1-205ENST00000467286 METP08581 1390 aa20.86■□□□□ 0.93
CRAMP1-205ENST00000467286 JCADQ9P266 1359 aa20.85■□□□□ 0.93
CRAMP1-205ENST00000467286 NALCNQ8IZF0 1738 aa20.85■□□□□ 0.93
CRAMP1-205ENST00000467286 SHPRHQ149N8 1683 aa20.83■□□□□ 0.93
CRAMP1-205ENST00000467286 VGFO15240 615 aaPredicted RBP20.83■□□□□ 0.93
CRAMP1-205ENST00000467286 RPGRIP1LQ68CZ1 1315 aa20.82■□□□□ 0.92
CRAMP1-205ENST00000467286 ADGRL3Q9HAR2 1447 aa20.82■□□□□ 0.92
CRAMP1-205ENST00000467286 CCDC144AA2RUR9 1427 aa20.8■□□□□ 0.92
CRAMP1-205ENST00000467286 PTCH1Q13635 1447 aa20.8■□□□□ 0.92
CRAMP1-205ENST00000467286 ASXL1Q8IXJ9 1541 aa20.8■□□□□ 0.92
CRAMP1-205ENST00000467286 NHSL1Q5SYE7 1610 aa20.79■□□□□ 0.92
CRAMP1-205ENST00000467286 MST1RQ04912 1400 aa20.78■□□□□ 0.92
CRAMP1-205ENST00000467286 IFT172Q9UG01 1749 aa20.78■□□□□ 0.92
CRAMP1-205ENST00000467286 RGS17Q9UGC6 210 aaPredicted RBP20.78■□□□□ 0.92
CRAMP1-205ENST00000467286 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.91
CRAMP1-205ENST00000467286 BRINP3Q76B58 766 aa20.76■□□□□ 0.91
CRAMP1-205ENST00000467286 PRAG1Q86YV5 1406 aa20.76■□□□□ 0.91
CRAMP1-205ENST00000467286 SPATA31A6Q5VVP1 1343 aa20.76■□□□□ 0.91
CRAMP1-205ENST00000467286 FOXD1Q16676 465 aa20.75■□□□□ 0.91
CRAMP1-205ENST00000467286 MPHOSPH9Q99550 1183 aa20.73■□□□□ 0.91
CRAMP1-205ENST00000467286 LRP6O75581 1613 aa20.72■□□□□ 0.91
CRAMP1-205ENST00000467286 ROBO2Q9HCK4 1378 aa20.71■□□□□ 0.91
CRAMP1-205ENST00000467286 SPATA31E1Q6ZUB1 1445 aa20.7■□□□□ 0.9
CRAMP1-205ENST00000467286 SETD5Q9C0A6 1442 aa20.7■□□□□ 0.9
CRAMP1-205ENST00000467286 MEX3CQ5U5Q3 659 aaKnown RBP20.7■□□□□ 0.9
CRAMP1-205ENST00000467286 ANKRD30BQ9BXX2 1392 aa20.7■□□□□ 0.9
CRAMP1-205ENST00000467286 POTEAQ6S8J7 498 aa20.69■□□□□ 0.9
CRAMP1-205ENST00000467286 KNDC1Q76NI1 1749 aa20.68■□□□□ 0.9
CRAMP1-205ENST00000467286 C1orf167Q5SNV9 1468 aa20.68■□□□□ 0.9
CRAMP1-205ENST00000467286 LAMC1P11047 1609 aa20.67■□□□□ 0.9
CRAMP1-205ENST00000467286 CDC42BPGQ6DT37 1551 aa20.67■□□□□ 0.9
CRAMP1-205ENST00000467286 RGL3Q3MIN7 710 aa20.66■□□□□ 0.9
CRAMP1-205ENST00000467286 ADGRF5Q8IZF2 1346 aa20.64■□□□□ 0.89
CRAMP1-205ENST00000467286 PIK3C2GO75747 1445 aa20.63■□□□□ 0.89
CRAMP1-205ENST00000467286 LRRC59Q96AG4 307 aaKnown RBP20.63■□□□□ 0.89
CRAMP1-205ENST00000467286 TECPR2O15040 1411 aa20.62■□□□□ 0.89
CRAMP1-205ENST00000467286 RAB3GAP2Q9H2M9 1393 aa20.61■□□□□ 0.89
CRAMP1-205ENST00000467286 ZNF772Q68DY9 489 aaPredicted RBP20.61■□□□□ 0.89
CRAMP1-205ENST00000467286 NUTM2BA6NNL0 878 aaPredicted RBP20.6■□□□□ 0.89
CRAMP1-205ENST00000467286 NUTM2EB1AL46 878 aaPredicted RBP20.6■□□□□ 0.89
CRAMP1-205ENST00000467286 NUTM2AQ8IVF1 878 aaPredicted RBP20.6■□□□□ 0.89
CRAMP1-205ENST00000467286 MYOM2P54296 1465 aa20.59■□□□□ 0.89
CRAMP1-205ENST00000467286 LRPPRCP42704 1394 aaKnown RBP20.59■□□□□ 0.89
CRAMP1-205ENST00000467286 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms