RNA–Protein interactions for RNA: ENST00000467019.5

ACSS2-205, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 4

Gene ACSS2, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-205	ENST00000467019	GCC2	Q8IWJ2	1684 aa		32.82	■■■□□ 2.84
ACSS2-205	ENST00000467019	RIMS2	Q9UQ26	1411 aa		32.81	■■■□□ 2.84
ACSS2-205	ENST00000467019	XIRP1	Q702N8	1843 aa	Known RBP	32.81	■■■□□ 2.84
ACSS2-205	ENST00000467019	NUP155	O75694	1391 aa		32.81	■■■□□ 2.84
ACSS2-205	ENST00000467019	PROSER2	Q86WR7	435 aa	Predicted RBP	32.8	■■■□□ 2.84
ACSS2-205	ENST00000467019	RBM33	Q96EV2	1170 aa	Known RBP	32.79	■■■□□ 2.84
ACSS2-205	ENST00000467019	TMEM131L	A2VDJ0	1609 aa		32.78	■■■□□ 2.84
ACSS2-205	ENST00000467019	CHGA	P10645	457 aa	Known RBP	32.78	■■■□□ 2.84
ACSS2-205	ENST00000467019	PLEKHG1	Q9ULL1	1385 aa		32.78	■■■□□ 2.84
ACSS2-205	ENST00000467019		E9PCH4	1651 aa		32.78	■■■□□ 2.84
ACSS2-205	ENST00000467019	IQGAP3	Q86VI3	1631 aa		32.77	■■■□□ 2.84
ACSS2-205	ENST00000467019	PPP1R15A	O75807	674 aa	Predicted RBP	32.77	■■■□□ 2.84
ACSS2-205	ENST00000467019	HDGF	P51858	240 aa	Known RBP	32.77	■■■□□ 2.84
ACSS2-205	ENST00000467019	MYO5B	Q9ULV0	1848 aa		32.72	■■■□□ 2.83
ACSS2-205	ENST00000467019	NWD1	Q149M9	1564 aa		32.72	■■■□□ 2.83
ACSS2-205	ENST00000467019	NKTR	P30414	1462 aa	Known RBP	32.72	■■■□□ 2.83
ACSS2-205	ENST00000467019	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
ACSS2-205	ENST00000467019	FAM135B	Q49AJ0	1406 aa		32.7	■■■□□ 2.83
ACSS2-205	ENST00000467019	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.69	■■■□□ 2.82
ACSS2-205	ENST00000467019	TBX22	Q9Y458	520 aa		32.68	■■■□□ 2.82
ACSS2-205	ENST00000467019	PHF23	Q9BUL5	403 aa	Predicted RBP	32.64	■■■□□ 2.82
ACSS2-205	ENST00000467019	RRBP1	Q9P2E9	1410 aa	Known RBP	32.63	■■■□□ 2.81
ACSS2-205	ENST00000467019	ADAMTS13	Q76LX8	1427 aa		32.62	■■■□□ 2.81
ACSS2-205	ENST00000467019	MSH6	P52701	1360 aa		32.61	■■■□□ 2.81
ACSS2-205	ENST00000467019	CHD2	O14647	1828 aa	Known RBP	32.57	■■■□□ 2.8
ACSS2-205	ENST00000467019	SLAIN2	Q9P270	581 aa		32.55	■■■□□ 2.8
ACSS2-205	ENST00000467019	ROBO1	Q9Y6N7	1651 aa		32.53	■■■□□ 2.8
ACSS2-205	ENST00000467019	NAIP	Q13075	1403 aa		32.53	■■■□□ 2.8
ACSS2-205	ENST00000467019	PIK3R4	Q99570	1358 aa		32.52	■■■□□ 2.8
ACSS2-205	ENST00000467019	DIP2A	Q14689	1571 aa		32.52	■■■□□ 2.8
ACSS2-205	ENST00000467019	NCOA3	Q9Y6Q9	1424 aa		32.5	■■■□□ 2.79
ACSS2-205	ENST00000467019	SPHKAP	Q2M3C7	1700 aa		32.47	■■■□□ 2.79
ACSS2-205	ENST00000467019	ZNF326	Q5BKZ1	582 aa	Known RBP	32.47	■■■□□ 2.79
ACSS2-205	ENST00000467019	C14orf37	Q86TY3	774 aa		32.47	■■■□□ 2.79
ACSS2-205	ENST00000467019	RGS17	Q9UGC6	210 aa	Predicted RBP	32.46	■■■□□ 2.79
ACSS2-205	ENST00000467019	AMOTL2	Q9Y2J4	779 aa		32.46	■■■□□ 2.79
ACSS2-205	ENST00000467019	PTPRU	Q92729	1446 aa		32.45	■■■□□ 2.79
ACSS2-205	ENST00000467019	TRPM2	O94759	1503 aa		32.44	■■■□□ 2.78
ACSS2-205	ENST00000467019	C19orf44	Q9H6X5	657 aa		32.42	■■■□□ 2.78
ACSS2-205	ENST00000467019	CADPS2	Q86UW7	1296 aa		32.39	■■■□□ 2.78
ACSS2-205	ENST00000467019	HFM1	A2PYH4	1435 aa		32.39	■■■□□ 2.78
ACSS2-205	ENST00000467019	CLTCL1	P53675	1640 aa		32.38	■■■□□ 2.77
ACSS2-205	ENST00000467019	SETBP1	Q9Y6X0	1596 aa		32.38	■■■□□ 2.77
ACSS2-205	ENST00000467019	TRIM52	Q96A61	297 aa		32.38	■■■□□ 2.77
ACSS2-205	ENST00000467019	NRXN3	Q9Y4C0	1643 aa		32.37	■■■□□ 2.77
ACSS2-205	ENST00000467019	ATF3	P18847	181 aa		32.37	■■■□□ 2.77
ACSS2-205	ENST00000467019	MET	P08581	1390 aa		32.35	■■■□□ 2.77
ACSS2-205	ENST00000467019	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.33	■■■□□ 2.77
ACSS2-205	ENST00000467019	NEXMIF	Q5QGS0	1516 aa		32.32	■■■□□ 2.76
ACSS2-205	ENST00000467019	JCAD	Q9P266	1359 aa		32.32	■■■□□ 2.76
ACSS2-205	ENST00000467019	PHLPP1	O60346	1717 aa		32.31	■■■□□ 2.76
ACSS2-205	ENST00000467019	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.3	■■■□□ 2.76
ACSS2-205	ENST00000467019	XRN1	Q8IZH2	1706 aa	Known RBP	32.29	■■■□□ 2.76
ACSS2-205	ENST00000467019	COL16A1	Q07092	1604 aa	Predicted RBP	32.26	■■■□□ 2.76
ACSS2-205	ENST00000467019	POTEA	Q6S8J7	498 aa		32.26	■■■□□ 2.75
ACSS2-205	ENST00000467019	BRINP3	Q76B58	766 aa		32.24	■■■□□ 2.75
ACSS2-205	ENST00000467019	DCC	P43146	1447 aa		32.24	■■■□□ 2.75
ACSS2-205	ENST00000467019	VGF	O15240	615 aa	Predicted RBP	32.21	■■■□□ 2.75
ACSS2-205	ENST00000467019	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.21	■■■□□ 2.75
ACSS2-205	ENST00000467019	KIF1B	O60333	1816 aa		32.2	■■■□□ 2.75
ACSS2-205	ENST00000467019	FOXD1	Q16676	465 aa		32.18	■■■□□ 2.74
ACSS2-205	ENST00000467019	RPGRIP1L	Q68CZ1	1315 aa		32.17	■■■□□ 2.74
ACSS2-205	ENST00000467019	MST1R	Q04912	1400 aa		32.17	■■■□□ 2.74
ACSS2-205	ENST00000467019	SPATA31A6	Q5VVP1	1343 aa		32.15	■■■□□ 2.74
ACSS2-205	ENST00000467019	ADGRL3	Q9HAR2	1447 aa		32.15	■■■□□ 2.74
ACSS2-205	ENST00000467019	LRP6	O75581	1613 aa		32.12	■■■□□ 2.73
ACSS2-205	ENST00000467019	ASXL1	Q8IXJ9	1541 aa		32.11	■■■□□ 2.73
ACSS2-205	ENST00000467019	ROBO2	Q9HCK4	1378 aa		32.08	■■■□□ 2.73
ACSS2-205	ENST00000467019	PTCH1	Q13635	1447 aa		32.08	■■■□□ 2.73
ACSS2-205	ENST00000467019	MEX3C	Q5U5Q3	659 aa	Known RBP	32.06	■■■□□ 2.72
ACSS2-205	ENST00000467019	MPHOSPH9	Q99550	1183 aa		32.06	■■■□□ 2.72
ACSS2-205	ENST00000467019	SETD1A	O15047	1707 aa	Known RBP	32.05	■■■□□ 2.72
ACSS2-205	ENST00000467019	NALCN	Q8IZF0	1738 aa		32.04	■■■□□ 2.72
ACSS2-205	ENST00000467019	SHPRH	Q149N8	1683 aa		32.04	■■■□□ 2.72
ACSS2-205	ENST00000467019	CCDC144A	A2RUR9	1427 aa		32.03	■■■□□ 2.72
ACSS2-205	ENST00000467019	SETD5	Q9C0A6	1442 aa		32.03	■■■□□ 2.72
ACSS2-205	ENST00000467019	DDX17	Q92841	729 aa	Known RBP	32.03	■■■□□ 2.72
ACSS2-205	ENST00000467019	PRAG1	Q86YV5	1406 aa		32.01	■■■□□ 2.72
ACSS2-205	ENST00000467019	RGL3	Q3MIN7	710 aa		32.01	■■■□□ 2.71
ACSS2-205	ENST00000467019	PPL	O60437	1756 aa		32.01	■■■□□ 2.71
ACSS2-205	ENST00000467019	NUTM2B	A6NNL0	878 aa	Predicted RBP	32	■■■□□ 2.71
ACSS2-205	ENST00000467019	NUTM2E	B1AL46	878 aa	Predicted RBP	32	■■■□□ 2.71
ACSS2-205	ENST00000467019	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32	■■■□□ 2.71
ACSS2-205	ENST00000467019	ADGRF5	Q8IZF2	1346 aa		32	■■■□□ 2.71
ACSS2-205	ENST00000467019	C1orf167	Q5SNV9	1468 aa		31.99	■■■□□ 2.71
ACSS2-205	ENST00000467019	LRRC59	Q96AG4	307 aa	Known RBP	31.99	■■■□□ 2.71
ACSS2-205	ENST00000467019	SPATA31E1	Q6ZUB1	1445 aa		31.99	■■■□□ 2.71
ACSS2-205	ENST00000467019	NHSL1	Q5SYE7	1610 aa		31.98	■■■□□ 2.71
ACSS2-205	ENST00000467019	ZNF772	Q68DY9	489 aa	Predicted RBP	31.96	■■■□□ 2.71
ACSS2-205	ENST00000467019	ORAI2	Q96SN7	254 aa		31.93	■■■□□ 2.7
ACSS2-205	ENST00000467019	ANKRD30B	Q9BXX2	1392 aa		31.92	■■■□□ 2.7
ACSS2-205	ENST00000467019	PNPLA6	Q8IY17	1366 aa		31.91	■■■□□ 2.7
ACSS2-205	ENST00000467019	STK26	Q9P289	416 aa		31.87	■■■□□ 2.69
ACSS2-205	ENST00000467019	AFF2	P51816	1311 aa		31.85	■■■□□ 2.69
ACSS2-205	ENST00000467019	ACIN1	Q9UKV3	1341 aa	Known RBP	31.85	■■■□□ 2.69
ACSS2-205	ENST00000467019	SOS2	Q07890	1332 aa	Predicted RBP	31.84	■■■□□ 2.69
ACSS2-205	ENST00000467019	TMEM132E	Q6IEE7	984 aa		31.84	■■■□□ 2.69
ACSS2-205	ENST00000467019	LRPPRC	P42704	1394 aa	Known RBP	31.83	■■■□□ 2.69
ACSS2-205	ENST00000467019	WAPL	Q7Z5K2	1190 aa		31.83	■■■□□ 2.69
ACSS2-205	ENST00000467019	TECPR2	O15040	1411 aa		31.83	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms