RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
LAMP3-202ENST00000466939 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
LAMP3-202ENST00000466939 POLR3GLQ9BT43 218 aa16.92■□□□□ 0.3
LAMP3-202ENST00000466939 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
LAMP3-202ENST00000466939 ERVK-7P63135 1459 aa16.91■□□□□ 0.3
LAMP3-202ENST00000466939 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
LAMP3-202ENST00000466939 RPGRIP1LQ68CZ1 1315 aa16.9■□□□□ 0.3
LAMP3-202ENST00000466939 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
LAMP3-202ENST00000466939 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
LAMP3-202ENST00000466939 KIAA1210Q9ULL0 1709 aa16.9■□□□□ 0.3
LAMP3-202ENST00000466939 PPLO60437 1756 aa16.89■□□□□ 0.29
LAMP3-202ENST00000466939 ADGRF5Q8IZF2 1346 aa16.89■□□□□ 0.29
LAMP3-202ENST00000466939 CENPBP07199 599 aaPredicted RBP16.88■□□□□ 0.29
LAMP3-202ENST00000466939 NRXN1Q9ULB1 1477 aa16.88■□□□□ 0.29
LAMP3-202ENST00000466939 IQGAP1P46940 1657 aa16.87■□□□□ 0.29
LAMP3-202ENST00000466939 IDI1Q13907 227 aa16.86■□□□□ 0.29
LAMP3-202ENST00000466939 FBXO31Q5XUX0 539 aaPredicted RBP16.86■□□□□ 0.29
LAMP3-202ENST00000466939 SCAF11Q99590 1463 aaKnown RBP16.86■□□□□ 0.29
LAMP3-202ENST00000466939 ADRA2BP18089 450 aa16.85■□□□□ 0.29
LAMP3-202ENST00000466939 EIF3AQ14152 1382 aaKnown RBP16.84■□□□□ 0.29
LAMP3-202ENST00000466939 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
LAMP3-202ENST00000466939 CFAP70Q5T0N1 1121 aa16.84■□□□□ 0.29
LAMP3-202ENST00000466939 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
LAMP3-202ENST00000466939 SPATA31D1Q6ZQQ2 1576 aa16.84■□□□□ 0.29
LAMP3-202ENST00000466939 CCER2I3L3R5 266 aa16.83■□□□□ 0.28
LAMP3-202ENST00000466939 PIK3C2GO75747 1445 aa16.82■□□□□ 0.28
LAMP3-202ENST00000466939 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
LAMP3-202ENST00000466939 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
LAMP3-202ENST00000466939 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
LAMP3-202ENST00000466939 TMF1P82094 1093 aa16.8■□□□□ 0.28
LAMP3-202ENST00000466939 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
LAMP3-202ENST00000466939 TESK2Q96S53 571 aa16.8■□□□□ 0.28
LAMP3-202ENST00000466939 SETBP1Q9Y6X0 1596 aa16.79■□□□□ 0.28
LAMP3-202ENST00000466939 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
LAMP3-202ENST00000466939 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
LAMP3-202ENST00000466939 NUTM2DQ5VT03 806 aaPredicted RBP16.78■□□□□ 0.28
LAMP3-202ENST00000466939 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
LAMP3-202ENST00000466939 ZFYVE9O95405 1425 aa16.76■□□□□ 0.27
LAMP3-202ENST00000466939 TNRQ92752 1358 aa16.74■□□□□ 0.27
LAMP3-202ENST00000466939 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
LAMP3-202ENST00000466939 A2ML1A8K2U0 1454 aa16.73■□□□□ 0.27
LAMP3-202ENST00000466939 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
LAMP3-202ENST00000466939 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
LAMP3-202ENST00000466939 MYO3AQ8NEV4 1616 aa16.71■□□□□ 0.27
LAMP3-202ENST00000466939 RIMS2Q9UQ26 1411 aa16.71■□□□□ 0.26
LAMP3-202ENST00000466939 SLC24A1O60721 1099 aa16.7■□□□□ 0.26
LAMP3-202ENST00000466939 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
LAMP3-202ENST00000466939 FER1L4A9Z1Z3 1794 aa16.7■□□□□ 0.26
LAMP3-202ENST00000466939 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
LAMP3-202ENST00000466939 TRAK1Q9UPV9 953 aa16.69■□□□□ 0.26
LAMP3-202ENST00000466939 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
LAMP3-202ENST00000466939 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
LAMP3-202ENST00000466939 QRICH2Q9H0J4 1663 aa16.66■□□□□ 0.26
LAMP3-202ENST00000466939 SBNO2Q9Y2G9 1366 aa16.66■□□□□ 0.26
LAMP3-202ENST00000466939 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
LAMP3-202ENST00000466939 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
LAMP3-202ENST00000466939 C3P01024 1663 aa16.65■□□□□ 0.26
LAMP3-202ENST00000466939 NLRP1Q9C000 1473 aa16.64■□□□□ 0.25
LAMP3-202ENST00000466939 CEBPAP49715 358 aaPredicted RBP16.64■□□□□ 0.25
LAMP3-202ENST00000466939 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
LAMP3-202ENST00000466939 PANK3Q9H999 370 aa16.63■□□□□ 0.25
LAMP3-202ENST00000466939 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
LAMP3-202ENST00000466939 ARHGEF28Q8N1W1 1705 aaKnown RBP16.63■□□□□ 0.25
LAMP3-202ENST00000466939 KTN1Q86UP2 1357 aaKnown RBP16.62■□□□□ 0.25
LAMP3-202ENST00000466939 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
LAMP3-202ENST00000466939 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
LAMP3-202ENST00000466939 STK26Q9P289 416 aa16.61■□□□□ 0.25
LAMP3-202ENST00000466939 RALBP1Q15311 655 aa16.61■□□□□ 0.25
LAMP3-202ENST00000466939 MYOM1P52179 1685 aa16.6■□□□□ 0.25
LAMP3-202ENST00000466939 YTHDC2Q9H6S0 1430 aaKnown RBP16.6■□□□□ 0.25
LAMP3-202ENST00000466939 TMEM2Q9UHN6 1383 aa16.59■□□□□ 0.25
LAMP3-202ENST00000466939 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
LAMP3-202ENST00000466939 RIMS1Q86UR5 1692 aaKnown RBP16.57■□□□□ 0.24
LAMP3-202ENST00000466939 PER1O15534 1290 aaPredicted RBP16.57■□□□□ 0.24
LAMP3-202ENST00000466939 BCANQ96GW7 911 aa16.57■□□□□ 0.24
LAMP3-202ENST00000466939 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
LAMP3-202ENST00000466939 KNSTRNQ9Y448 316 aa16.56■□□□□ 0.24
LAMP3-202ENST00000466939 EVC2Q86UK5 1308 aa16.56■□□□□ 0.24
LAMP3-202ENST00000466939 PTPRMP28827 1452 aa16.56■□□□□ 0.24
LAMP3-202ENST00000466939 POGKQ9P215 609 aa16.55■□□□□ 0.24
LAMP3-202ENST00000466939 PARD3Q8TEW0 1356 aa16.55■□□□□ 0.24
LAMP3-202ENST00000466939 NRXN3Q9Y4C0 1643 aa16.55■□□□□ 0.24
LAMP3-202ENST00000466939 SETD1AO15047 1707 aaKnown RBP16.55■□□□□ 0.24
LAMP3-202ENST00000466939 SAFB2Q14151 953 aaKnown RBP eCLIP16.54■□□□□ 0.24
LAMP3-202ENST00000466939 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
LAMP3-202ENST00000466939 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
LAMP3-202ENST00000466939 FAM9BQ8IZU0 186 aa16.54■□□□□ 0.24
LAMP3-202ENST00000466939 PRAM1Q96QH2 718 aa16.54■□□□□ 0.24
LAMP3-202ENST00000466939 TULP4Q9NRJ4 1543 aa16.54■□□□□ 0.24
LAMP3-202ENST00000466939 DLC1Q96QB1 1528 aa16.53■□□□□ 0.24
LAMP3-202ENST00000466939 TMC1Q8TDI8 760 aa16.52■□□□□ 0.23
LAMP3-202ENST00000466939 EID1Q9Y6B2 187 aa16.52■□□□□ 0.23
LAMP3-202ENST00000466939 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
LAMP3-202ENST00000466939 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
LAMP3-202ENST00000466939 ADAMTSL3P82987 1691 aa16.51■□□□□ 0.23
LAMP3-202ENST00000466939 PLEKHG1Q9ULL1 1385 aa16.5■□□□□ 0.23
LAMP3-202ENST00000466939 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
LAMP3-202ENST00000466939 PUS7Q96PZ0 661 aaKnown RBP16.5■□□□□ 0.23
LAMP3-202ENST00000466939 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
LAMP3-202ENST00000466939 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms