RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 TIMELESSQ9UNS1 1208 aa23.66■■□□□ 1.38
HLA-C-205ENST00000466892 SCAF11Q99590 1463 aaKnown RBP23.65■■□□□ 1.38
HLA-C-205ENST00000466892 SIN3AQ96ST3 1273 aa23.65■■□□□ 1.38
HLA-C-205ENST00000466892 VGFO15240 615 aaPredicted RBP23.64■■□□□ 1.37
HLA-C-205ENST00000466892 NEXMIFQ5QGS0 1516 aa23.64■■□□□ 1.37
HLA-C-205ENST00000466892 HSPA2P54652 639 aa23.63■■□□□ 1.37
HLA-C-205ENST00000466892 MED14O60244 1454 aa23.62■■□□□ 1.37
HLA-C-205ENST00000466892 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
HLA-C-205ENST00000466892 TXNDC2Q86VQ3 553 aa23.62■■□□□ 1.37
HLA-C-205ENST00000466892 MYOM2P54296 1465 aa23.61■■□□□ 1.37
HLA-C-205ENST00000466892 NEUROD1Q13562 356 aa23.6■■□□□ 1.37
HLA-C-205ENST00000466892 PPP1R15AO75807 674 aaPredicted RBP23.59■■□□□ 1.37
HLA-C-205ENST00000466892 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
HLA-C-205ENST00000466892 PLEKHG1Q9ULL1 1385 aa23.59■■□□□ 1.37
HLA-C-205ENST00000466892 LTKP29376 864 aa23.58■■□□□ 1.37
HLA-C-205ENST00000466892 DMRT2Q9Y5R5 561 aa23.58■■□□□ 1.37
HLA-C-205ENST00000466892 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
HLA-C-205ENST00000466892 MYO5BQ9ULV0 1848 aa23.55■■□□□ 1.36
HLA-C-205ENST00000466892 NPHP4O75161 1426 aaPredicted RBP23.55■■□□□ 1.36
HLA-C-205ENST00000466892 DCAF11Q8TEB1 546 aa23.54■■□□□ 1.36
HLA-C-205ENST00000466892 L3MBTL2Q969R5 705 aa23.54■■□□□ 1.36
HLA-C-205ENST00000466892 PPLO60437 1756 aa23.54■■□□□ 1.36
HLA-C-205ENST00000466892 IFT172Q9UG01 1749 aa23.53■■□□□ 1.36
HLA-C-205ENST00000466892 NCKAP5LQ9HCH0 1330 aa23.53■■□□□ 1.36
HLA-C-205ENST00000466892 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
HLA-C-205ENST00000466892 SETBP1Q9Y6X0 1596 aa23.52■■□□□ 1.36
HLA-C-205ENST00000466892 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
HLA-C-205ENST00000466892 DIP2AQ14689 1571 aa23.49■■□□□ 1.35
HLA-C-205ENST00000466892 STRCQ7RTU9 1775 aa23.48■■□□□ 1.35
HLA-C-205ENST00000466892 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
HLA-C-205ENST00000466892 NUTM2DQ5VT03 806 aaPredicted RBP23.47■■□□□ 1.35
HLA-C-205ENST00000466892 TBX22Q9Y458 520 aa23.47■■□□□ 1.35
HLA-C-205ENST00000466892 IQGAP1P46940 1657 aa23.47■■□□□ 1.35
HLA-C-205ENST00000466892 ADAMTS13Q76LX8 1427 aa23.45■■□□□ 1.34
HLA-C-205ENST00000466892 PRAG1Q86YV5 1406 aa23.45■■□□□ 1.34
HLA-C-205ENST00000466892 PIK3R4Q99570 1358 aa23.44■■□□□ 1.34
HLA-C-205ENST00000466892 KDM2AQ9Y2K7 1162 aa23.44■■□□□ 1.34
HLA-C-205ENST00000466892 BCANQ96GW7 911 aa23.43■■□□□ 1.34
HLA-C-205ENST00000466892 C14orf93Q9H972 538 aaKnown RBP23.42■■□□□ 1.34
HLA-C-205ENST00000466892 LAMC1P11047 1609 aa23.41■■□□□ 1.34
HLA-C-205ENST00000466892 NRXN3Q9Y4C0 1643 aa23.41■■□□□ 1.34
HLA-C-205ENST00000466892 ALKQ9UM73 1620 aa23.38■■□□□ 1.33
HLA-C-205ENST00000466892 SLC26A8Q96RN1 970 aa23.37■■□□□ 1.33
HLA-C-205ENST00000466892 KIAA1210Q9ULL0 1709 aa23.34■■□□□ 1.33
HLA-C-205ENST00000466892 CFAP70Q5T0N1 1121 aa23.33■■□□□ 1.33
HLA-C-205ENST00000466892 METP08581 1390 aa23.32■■□□□ 1.32
HLA-C-205ENST00000466892 KCNA6P17658 529 aa23.31■■□□□ 1.32
HLA-C-205ENST00000466892 ADGRB1O14514 1584 aa23.31■■□□□ 1.32
HLA-C-205ENST00000466892 SETD1AO15047 1707 aaKnown RBP23.3■■□□□ 1.32
HLA-C-205ENST00000466892 RALGAPBQ86X10 1494 aa23.3■■□□□ 1.32
HLA-C-205ENST00000466892 GPRASP1Q5JY77 1395 aa23.29■■□□□ 1.32
HLA-C-205ENST00000466892 ZEB1P37275 1124 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-205ENST00000466892 NWD1Q149M9 1564 aa23.29■■□□□ 1.32
HLA-C-205ENST00000466892 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
HLA-C-205ENST00000466892 LRPPRCP42704 1394 aaKnown RBP23.28■■□□□ 1.32
HLA-C-205ENST00000466892 TECPR2O15040 1411 aa23.28■■□□□ 1.32
HLA-C-205ENST00000466892 NKTRP30414 1462 aaKnown RBP23.28■■□□□ 1.32
HLA-C-205ENST00000466892 ABCC11Q96J66 1382 aa23.27■■□□□ 1.32
HLA-C-205ENST00000466892 ASXL1Q8IXJ9 1541 aa23.27■■□□□ 1.32
HLA-C-205ENST00000466892 ROCK2O75116 1388 aaKnown RBP23.27■■□□□ 1.31
HLA-C-205ENST00000466892 TRPM1Q7Z4N2 1603 aa23.26■■□□□ 1.31
HLA-C-205ENST00000466892 PTCH1Q13635 1447 aa23.25■■□□□ 1.31
HLA-C-205ENST00000466892 YTHDC2Q9H6S0 1430 aaKnown RBP23.25■■□□□ 1.31
HLA-C-205ENST00000466892 CPS1P31327 1500 aa23.25■■□□□ 1.31
HLA-C-205ENST00000466892 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
HLA-C-205ENST00000466892 SIRT1Q96EB6 747 aa23.24■■□□□ 1.31
HLA-C-205ENST00000466892 AMOTL2Q9Y2J4 779 aa23.24■■□□□ 1.31
HLA-C-205ENST00000466892 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
HLA-C-205ENST00000466892 XRN1Q8IZH2 1706 aaKnown RBP23.22■■□□□ 1.31
HLA-C-205ENST00000466892 TMEM132EQ6IEE7 984 aa23.22■■□□□ 1.31
HLA-C-205ENST00000466892 ZNF335Q9H4Z2 1342 aaPredicted RBP23.22■■□□□ 1.31
HLA-C-205ENST00000466892 DLC1Q96QB1 1528 aa23.22■■□□□ 1.31
HLA-C-205ENST00000466892 NBPF1Q3BBV0 1214 aa23.21■■□□□ 1.31
HLA-C-205ENST00000466892 CHD2O14647 1828 aaKnown RBP23.2■■□□□ 1.3
HLA-C-205ENST00000466892 FAM135BQ49AJ0 1406 aa23.2■■□□□ 1.3
HLA-C-205ENST00000466892 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
HLA-C-205ENST00000466892 CARD11Q9BXL7 1154 aa23.18■■□□□ 1.3
HLA-C-205ENST00000466892 KNDC1Q76NI1 1749 aa23.18■■□□□ 1.3
HLA-C-205ENST00000466892 EIF3AQ14152 1382 aaKnown RBP23.17■■□□□ 1.3
HLA-C-205ENST00000466892 LTBP4Q8N2S1 1624 aa23.17■■□□□ 1.3
HLA-C-205ENST00000466892 ROBO2Q9HCK4 1378 aa23.14■■□□□ 1.3
HLA-C-205ENST00000466892 STK26Q9P289 416 aa23.14■■□□□ 1.29
HLA-C-205ENST00000466892 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
HLA-C-205ENST00000466892 PROSER2Q86WR7 435 aaPredicted RBP23.12■■□□□ 1.29
HLA-C-205ENST00000466892 TRAK1Q9UPV9 953 aa23.12■■□□□ 1.29
HLA-C-205ENST00000466892 IQSEC2Q5JU85 1478 aa23.11■■□□□ 1.29
HLA-C-205ENST00000466892 TMEM94Q12767 1356 aa23.1■■□□□ 1.29
HLA-C-205ENST00000466892 STRCP1A6NGW2 1772 aa23.09■■□□□ 1.29
HLA-C-205ENST00000466892 SLC24A1O60721 1099 aa23.08■■□□□ 1.29
HLA-C-205ENST00000466892 PRAM1Q96QH2 718 aa23.08■■□□□ 1.29
HLA-C-205ENST00000466892 POGKQ9P215 609 aa23.07■■□□□ 1.28
HLA-C-205ENST00000466892 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-205ENST00000466892 USP47Q96K76 1375 aa23.06■■□□□ 1.28
HLA-C-205ENST00000466892 SBNO2Q9Y2G9 1366 aa23.06■■□□□ 1.28
HLA-C-205ENST00000466892 ADGRL3Q9HAR2 1447 aa23.06■■□□□ 1.28
HLA-C-205ENST00000466892 ARHGEF28Q8N1W1 1705 aaKnown RBP23.05■■□□□ 1.28
HLA-C-205ENST00000466892 DCCP43146 1447 aa23.05■■□□□ 1.28
HLA-C-205ENST00000466892 WAPLQ7Z5K2 1190 aa23.03■■□□□ 1.28
HLA-C-205ENST00000466892 C19orf44Q9H6X5 657 aa23.03■■□□□ 1.28
HLA-C-205ENST00000466892 MSH6P52701 1360 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms