RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 SLC4A3P48751 1232 aa9.02□□□□□ -0.97
CALD1-214ENST00000466704 SWT1Q5T5J6 900 aaKnown RBP9.02□□□□□ -0.97
CALD1-214ENST00000466704 LRCH3Q96II8 777 aa9.02□□□□□ -0.97
CALD1-214ENST00000466704 PHOX2BQ99453 314 aa9.02□□□□□ -0.97
CALD1-214ENST00000466704 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.97
CALD1-214ENST00000466704 TTLL12Q14166 644 aaPredicted RBP9.01□□□□□ -0.97
CALD1-214ENST00000466704 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
CALD1-214ENST00000466704 MDM2Q00987 491 aaPredicted RBP9□□□□□ -0.97
CALD1-214ENST00000466704 CLCN1P35523 988 aa8.99□□□□□ -0.97
CALD1-214ENST00000466704 AMHR2Q16671 573 aa8.99□□□□□ -0.97
CALD1-214ENST00000466704 SLF2Q8IX21 1173 aa8.99□□□□□ -0.97
CALD1-214ENST00000466704 DAXXQ9UER7 740 aaPredicted RBP8.99□□□□□ -0.97
CALD1-214ENST00000466704 SOWAHBA6NEL2 793 aa8.98□□□□□ -0.97
CALD1-214ENST00000466704 BCAMP50895 628 aa8.98□□□□□ -0.97
CALD1-214ENST00000466704 PDE4DQ08499 809 aa8.98□□□□□ -0.97
CALD1-214ENST00000466704 GPCPD1Q9NPB8 672 aa8.98□□□□□ -0.97
CALD1-214ENST00000466704 THSD4Q6ZMP0 1018 aa8.97□□□□□ -0.97
CALD1-214ENST00000466704 SULF1Q8IWU6 871 aa8.96□□□□□ -0.98
CALD1-214ENST00000466704 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
CALD1-214ENST00000466704 DDX11L8A8MPP1 907 aa8.95□□□□□ -0.98
CALD1-214ENST00000466704 PTPN5P54829 565 aa8.95□□□□□ -0.98
CALD1-214ENST00000466704 RSPH4AQ5TD94 716 aa8.95□□□□□ -0.98
CALD1-214ENST00000466704 HPS5Q9UPZ3 1129 aa8.95□□□□□ -0.98
CALD1-214ENST00000466704 PPP4CP60510 307 aa8.94□□□□□ -0.98
CALD1-214ENST00000466704 PARP9Q8IXQ6 854 aa8.94□□□□□ -0.98
CALD1-214ENST00000466704 RDH13Q8NBN7 331 aa8.94□□□□□ -0.98
CALD1-214ENST00000466704 TSR3Q9UJK0 312 aaKnown RBP8.94□□□□□ -0.98
CALD1-214ENST00000466704 NEUROD2Q15784 382 aa8.93□□□□□ -0.98
CALD1-214ENST00000466704 GIGYF2Q6Y7W6 1299 aaKnown RBP8.93□□□□□ -0.98
CALD1-214ENST00000466704 REPIN1Q9BWE0 567 aaKnown RBP8.93□□□□□ -0.98
CALD1-214ENST00000466704 RGS20O76081 388 aa8.91□□□□□ -0.98
CALD1-214ENST00000466704 IFFO2Q5TF58 517 aa8.91□□□□□ -0.98
CALD1-214ENST00000466704 TMUB1Q9BVT8 246 aa8.91□□□□□ -0.98
CALD1-214ENST00000466704 FAM217BQ9NTX9 383 aaPredicted RBP8.91□□□□□ -0.98
CALD1-214ENST00000466704 SSTR3P32745 418 aaPredicted RBP8.9□□□□□ -0.98
CALD1-214ENST00000466704 WBP1LQ9NX94 342 aa8.9□□□□□ -0.98
CALD1-214ENST00000466704 SLC10A3P09131 477 aa8.89□□□□□ -0.99
CALD1-214ENST00000466704 KMT5BQ4FZB7 885 aa8.89□□□□□ -0.99
CALD1-214ENST00000466704 GPBP1L1Q9HC44 474 aaPredicted RBP8.89□□□□□ -0.99
CALD1-214ENST00000466704 CFHP08603 1231 aa8.88□□□□□ -0.99
CALD1-214ENST00000466704 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
CALD1-214ENST00000466704 CD46P15529 392 aa8.87□□□□□ -0.99
CALD1-214ENST00000466704 NYAP1Q6ZVC0 841 aa8.87□□□□□ -0.99
CALD1-214ENST00000466704 KDM4CQ9H3R0 1056 aa8.87□□□□□ -0.99
CALD1-214ENST00000466704 MS4A1P11836 297 aa8.85□□□□□ -0.99
CALD1-214ENST00000466704 BRPF1P55201 1214 aaPredicted RBP8.85□□□□□ -0.99
CALD1-214ENST00000466704 GCGRP47871 477 aa8.84□□□□□ -0.99
CALD1-214ENST00000466704 APLP1P51693 650 aa8.84□□□□□ -0.99
CALD1-214ENST00000466704 BEGAINQ9BUH8 593 aa8.84□□□□□ -0.99
CALD1-214ENST00000466704 ACTN4O43707 911 aaKnown RBP8.82□□□□□ -1
CALD1-214ENST00000466704 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
CALD1-214ENST00000466704 KDM4AO75164 1064 aa8.81□□□□□ -1
CALD1-214ENST00000466704 PCDHB3Q9Y5E6 796 aa8.81□□□□□ -1
CALD1-214ENST00000466704 A0A0G2JS52 829 aa8.8□□□□□ -1
CALD1-214ENST00000466704 GRIPAP1Q4V328 841 aa8.8□□□□□ -1
CALD1-214ENST00000466704 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
CALD1-214ENST00000466704 FUT2Q10981 343 aa8.79□□□□□ -1
CALD1-214ENST00000466704 DIXDC1Q155Q3 683 aa8.79□□□□□ -1
CALD1-214ENST00000466704 USP46P62068 366 aa8.78□□□□□ -1
CALD1-214ENST00000466704 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
CALD1-214ENST00000466704 FAM117AQ9C073 453 aa8.78□□□□□ -1
CALD1-214ENST00000466704 ATP6V1AP38606 617 aa8.77□□□□□ -1.01
CALD1-214ENST00000466704 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
CALD1-214ENST00000466704 SPIRE2Q8WWL2 714 aa8.77□□□□□ -1.01
CALD1-214ENST00000466704 COPS2P61201 443 aa8.76□□□□□ -1.01
CALD1-214ENST00000466704 IL27Q8NEV9 243 aa8.76□□□□□ -1.01
CALD1-214ENST00000466704 MTRQ99707 1265 aa8.76□□□□□ -1.01
CALD1-214ENST00000466704 TBC1D2Q9BYX2 928 aa8.76□□□□□ -1.01
CALD1-214ENST00000466704 HOXA2O43364 376 aa8.75□□□□□ -1.01
CALD1-214ENST00000466704 BLOC1S3Q6QNY0 202 aa8.75□□□□□ -1.01
CALD1-214ENST00000466704 NR1I2O75469 434 aa8.74□□□□□ -1.01
CALD1-214ENST00000466704 RSPH6AQ9H0K4 717 aa8.74□□□□□ -1.01
CALD1-214ENST00000466704 IL21Q9HBE4 155 aa8.74□□□□□ -1.01
CALD1-214ENST00000466704 MORN1Q5T089 497 aa8.73□□□□□ -1.01
CALD1-214ENST00000466704 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
CALD1-214ENST00000466704 PLEKHG3A1L390 1219 aa8.72□□□□□ -1.01
CALD1-214ENST00000466704 MOXD2PA6NHM9 499 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 FDX1P10109 184 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 NDUFV2P19404 249 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 KCNC4Q03721 635 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 TJAP1Q5JTD0 557 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 MYSM1Q5VVJ2 828 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 HLA-CQ95604 372 aa8.71□□□□□ -1.02
CALD1-214ENST00000466704 ZPR1O75312 459 aa8.7□□□□□ -1.02
CALD1-214ENST00000466704 SLC27A5Q9Y2P5 690 aa8.7□□□□□ -1.02
CALD1-214ENST00000466704 ITGBL1O95965 494 aaPredicted RBP8.69□□□□□ -1.02
CALD1-214ENST00000466704 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
CALD1-214ENST00000466704 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
CALD1-214ENST00000466704 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
CALD1-214ENST00000466704 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
CALD1-214ENST00000466704 Q3C1V9 767 aa8.68□□□□□ -1.02
CALD1-214ENST00000466704 SH3D19Q5HYK7 790 aa8.68□□□□□ -1.02
CALD1-214ENST00000466704 RSBN1LQ6PCB5 846 aaPredicted RBP8.68□□□□□ -1.02
CALD1-214ENST00000466704 SPTLC1O15269 473 aa8.67□□□□□ -1.02
CALD1-214ENST00000466704 TLL1O43897 1013 aa8.67□□□□□ -1.02
CALD1-214ENST00000466704 FMNL1O95466 1100 aaPredicted RBP8.67□□□□□ -1.02
CALD1-214ENST00000466704 SKIV2LQ15477 1246 aaKnown RBP8.67□□□□□ -1.02
CALD1-214ENST00000466704 CSPP1Q1MSJ5 1256 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms