RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 MADDQ8WXG6 1647 aa13.43□□□□□ -0.26
SRPRB-202ENST00000466636 MLECQ14165 292 aa13.43□□□□□ -0.26
SRPRB-202ENST00000466636 CARD11Q9BXL7 1154 aa13.43□□□□□ -0.26
SRPRB-202ENST00000466636 FBXO31Q5XUX0 539 aaPredicted RBP13.42□□□□□ -0.26
SRPRB-202ENST00000466636 SLC52A1Q9NWF4 448 aa13.42□□□□□ -0.26
SRPRB-202ENST00000466636 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
SRPRB-202ENST00000466636 MROH2AA6NES4 1674 aa13.41□□□□□ -0.26
SRPRB-202ENST00000466636 NBPF1Q3BBV0 1214 aa13.41□□□□□ -0.26
SRPRB-202ENST00000466636 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
SRPRB-202ENST00000466636 RPGRIP1LQ68CZ1 1315 aa13.4□□□□□ -0.26
SRPRB-202ENST00000466636 LAMC1P11047 1609 aa13.4□□□□□ -0.26
SRPRB-202ENST00000466636 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
SRPRB-202ENST00000466636 IDI1Q13907 227 aa13.4□□□□□ -0.26
SRPRB-202ENST00000466636 MIER1Q8N108 512 aa13.4□□□□□ -0.26
SRPRB-202ENST00000466636 SPATA31D1Q6ZQQ2 1576 aa13.4□□□□□ -0.26
SRPRB-202ENST00000466636 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
SRPRB-202ENST00000466636 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
SRPRB-202ENST00000466636 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
SRPRB-202ENST00000466636 C11orf95C9JLR9 678 aaPredicted RBP13.39□□□□□ -0.27
SRPRB-202ENST00000466636 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
SRPRB-202ENST00000466636 CHGAP10645 457 aaKnown RBP13.39□□□□□ -0.27
SRPRB-202ENST00000466636 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
SRPRB-202ENST00000466636 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
SRPRB-202ENST00000466636 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
SRPRB-202ENST00000466636 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
SRPRB-202ENST00000466636 KIF1BO60333 1816 aa13.36□□□□□ -0.27
SRPRB-202ENST00000466636 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
SRPRB-202ENST00000466636 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
SRPRB-202ENST00000466636 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
SRPRB-202ENST00000466636 NEXMIFQ5QGS0 1516 aa13.35□□□□□ -0.27
SRPRB-202ENST00000466636 ST20-MTHFSA0A0A6YYL1 179 aa13.35□□□□□ -0.27
SRPRB-202ENST00000466636 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
SRPRB-202ENST00000466636 ZFYVE9O95405 1425 aa13.34□□□□□ -0.27
SRPRB-202ENST00000466636 TMEM131LA2VDJ0 1609 aa13.34□□□□□ -0.27
SRPRB-202ENST00000466636 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.28
SRPRB-202ENST00000466636 SCAF11Q99590 1463 aaKnown RBP13.32□□□□□ -0.28
SRPRB-202ENST00000466636 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
SRPRB-202ENST00000466636 TNRQ92752 1358 aa13.32□□□□□ -0.28
SRPRB-202ENST00000466636 A2ML1A8K2U0 1454 aa13.31□□□□□ -0.28
SRPRB-202ENST00000466636 PPLO60437 1756 aa13.31□□□□□ -0.28
SRPRB-202ENST00000466636 TESK2Q96S53 571 aa13.31□□□□□ -0.28
SRPRB-202ENST00000466636 C14orf93Q9H972 538 aaKnown RBP13.31□□□□□ -0.28
SRPRB-202ENST00000466636 VGFO15240 615 aaPredicted RBP13.3□□□□□ -0.28
SRPRB-202ENST00000466636 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
SRPRB-202ENST00000466636 IQGAP1P46940 1657 aa13.29□□□□□ -0.28
SRPRB-202ENST00000466636 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
SRPRB-202ENST00000466636 ADGRB1O14514 1584 aa13.28□□□□□ -0.28
SRPRB-202ENST00000466636 EIF3AQ14152 1382 aaKnown RBP13.26□□□□□ -0.29
SRPRB-202ENST00000466636 NUTM2DQ5VT03 806 aaPredicted RBP13.26□□□□□ -0.29
SRPRB-202ENST00000466636 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
SRPRB-202ENST00000466636 CFAP65Q6ZU64 1925 aaKnown RBP13.25□□□□□ -0.29
SRPRB-202ENST00000466636 NLRP1Q9C000 1473 aa13.25□□□□□ -0.29
SRPRB-202ENST00000466636 RIMS2Q9UQ26 1411 aa13.25□□□□□ -0.29
SRPRB-202ENST00000466636 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
SRPRB-202ENST00000466636 CEBPAP49715 358 aaPredicted RBP13.25□□□□□ -0.29
SRPRB-202ENST00000466636 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
SRPRB-202ENST00000466636 ANP32CO43423 234 aa13.23□□□□□ -0.29
SRPRB-202ENST00000466636 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
SRPRB-202ENST00000466636 TMF1P82094 1093 aa13.22□□□□□ -0.29
SRPRB-202ENST00000466636 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
SRPRB-202ENST00000466636 TMEM132EQ6IEE7 984 aa13.21□□□□□ -0.29
SRPRB-202ENST00000466636 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
SRPRB-202ENST00000466636 FER1L4A9Z1Z3 1794 aa13.21□□□□□ -0.29
SRPRB-202ENST00000466636 C3P01024 1663 aa13.21□□□□□ -0.3
SRPRB-202ENST00000466636 KDM5AP29375 1690 aaKnown RBP13.21□□□□□ -0.3
SRPRB-202ENST00000466636 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
SRPRB-202ENST00000466636 CCER2I3L3R5 266 aa13.2□□□□□ -0.3
SRPRB-202ENST00000466636 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRPRB-202ENST00000466636 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
SRPRB-202ENST00000466636 MYO5BQ9ULV0 1848 aa13.19□□□□□ -0.3
SRPRB-202ENST00000466636 ADAMTSL3P82987 1691 aa13.18□□□□□ -0.3
SRPRB-202ENST00000466636 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
SRPRB-202ENST00000466636 PTPRMP28827 1452 aa13.18□□□□□ -0.3
SRPRB-202ENST00000466636 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
SRPRB-202ENST00000466636 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
SRPRB-202ENST00000466636 UBR1Q8IWV7 1749 aa13.17□□□□□ -0.3
SRPRB-202ENST00000466636 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
SRPRB-202ENST00000466636 HDGFP51858 240 aaKnown RBP13.16□□□□□ -0.3
SRPRB-202ENST00000466636 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
SRPRB-202ENST00000466636 ARHGAP23Q9P227 1491 aa13.16□□□□□ -0.3
SRPRB-202ENST00000466636 YTHDC2Q9H6S0 1430 aaKnown RBP13.15□□□□□ -0.3
SRPRB-202ENST00000466636 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
SRPRB-202ENST00000466636 SLIT1O75093 1534 aa13.14□□□□□ -0.31
SRPRB-202ENST00000466636 NRXN3Q9Y4C0 1643 aa13.14□□□□□ -0.31
SRPRB-202ENST00000466636 LRPPRCP42704 1394 aaKnown RBP13.14□□□□□ -0.31
SRPRB-202ENST00000466636 RIMS1Q86UR5 1692 aaKnown RBP13.14□□□□□ -0.31
SRPRB-202ENST00000466636 PLEKHG1Q9ULL1 1385 aa13.13□□□□□ -0.31
SRPRB-202ENST00000466636 LTKP29376 864 aa13.12□□□□□ -0.31
SRPRB-202ENST00000466636 DLC1Q96QB1 1528 aa13.12□□□□□ -0.31
SRPRB-202ENST00000466636 ADAMTS13Q76LX8 1427 aa13.12□□□□□ -0.31
SRPRB-202ENST00000466636 SETD1AO15047 1707 aaKnown RBP13.11□□□□□ -0.31
SRPRB-202ENST00000466636 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
SRPRB-202ENST00000466636 METP08581 1390 aa13.11□□□□□ -0.31
SRPRB-202ENST00000466636 ABCC11Q96J66 1382 aa13.11□□□□□ -0.31
SRPRB-202ENST00000466636 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
SRPRB-202ENST00000466636 STK26Q9P289 416 aa13.11□□□□□ -0.31
SRPRB-202ENST00000466636 TXNDC2Q86VQ3 553 aa13.1□□□□□ -0.31
SRPRB-202ENST00000466636 THEMISQ8N1K5 641 aaPredicted RBP13.1□□□□□ -0.31
SRPRB-202ENST00000466636 YTHDC1Q96MU7 727 aaKnown RBP13.1□□□□□ -0.31
SRPRB-202ENST00000466636 PANK3Q9H999 370 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms