RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 KIF14Q15058 1648 aa9.31□□□□□ -0.92
PSMB4-202ENST00000466425 ZNF644Q9H582 1327 aaPredicted RBP9.31□□□□□ -0.92
PSMB4-202ENST00000466425 UHRF1BP1LA0JNW5 1464 aa9.3□□□□□ -0.92
PSMB4-202ENST00000466425 ZNF777Q9ULD5 760 aaPredicted RBP9.3□□□□□ -0.92
PSMB4-202ENST00000466425 ZCCHC11Q5TAX3 1644 aaKnown RBP9.3□□□□□ -0.92
PSMB4-202ENST00000466425 ABCC2Q92887 1545 aa9.3□□□□□ -0.92
PSMB4-202ENST00000466425 NCOA1Q15788 1441 aa9.3□□□□□ -0.92
PSMB4-202ENST00000466425 ABCC10Q5T3U5 1492 aa9.29□□□□□ -0.92
PSMB4-202ENST00000466425 SHANK2Q9UPX8 1470 aa9.29□□□□□ -0.92
PSMB4-202ENST00000466425 RIOK3O14730 519 aaKnown RBP9.28□□□□□ -0.92
PSMB4-202ENST00000466425 HOXB3P14651 431 aaPredicted RBP9.28□□□□□ -0.92
PSMB4-202ENST00000466425 TSPOAP1O95153 1857 aa9.28□□□□□ -0.92
PSMB4-202ENST00000466425 PDCD7Q8N8D1 485 aaKnown RBP9.27□□□□□ -0.93
PSMB4-202ENST00000466425 ANKRD30BQ9BXX2 1392 aa9.26□□□□□ -0.93
PSMB4-202ENST00000466425 DIP2BQ9P265 1576 aa9.26□□□□□ -0.93
PSMB4-202ENST00000466425 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
PSMB4-202ENST00000466425 PLEKHH2Q8IVE3 1493 aa9.26□□□□□ -0.93
PSMB4-202ENST00000466425 C9orf84Q5VXU9 1444 aa9.25□□□□□ -0.93
PSMB4-202ENST00000466425 PKD2Q13563 968 aa9.25□□□□□ -0.93
PSMB4-202ENST00000466425 KDM5BQ9UGL1 1544 aa9.25□□□□□ -0.93
PSMB4-202ENST00000466425 ANKRD50Q9ULJ7 1429 aa9.24□□□□□ -0.93
PSMB4-202ENST00000466425 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
PSMB4-202ENST00000466425 ZNF687Q8N1G0 1237 aa9.24□□□□□ -0.93
PSMB4-202ENST00000466425 CABP2Q9NPB3 220 aa9.24□□□□□ -0.93
PSMB4-202ENST00000466425 EIF4G2P78344 907 aaKnown RBP eCLIP9.23□□□□□ -0.93
PSMB4-202ENST00000466425 YTHDC1Q96MU7 727 aaKnown RBP9.23□□□□□ -0.93
PSMB4-202ENST00000466425 ARHGEF5Q12774 1597 aa9.23□□□□□ -0.93
PSMB4-202ENST00000466425 KIAA1107Q9UPP5 1409 aa9.22□□□□□ -0.93
PSMB4-202ENST00000466425 RPRD2Q5VT52 1461 aaKnown RBP9.22□□□□□ -0.93
PSMB4-202ENST00000466425 CCDC141Q6ZP82 1450 aa9.22□□□□□ -0.93
PSMB4-202ENST00000466425 ANP32CO43423 234 aa9.22□□□□□ -0.93
PSMB4-202ENST00000466425 RNF25Q96BH1 459 aaPredicted RBP9.22□□□□□ -0.93
PSMB4-202ENST00000466425 DENND4BO75064 1496 aaPredicted RBP9.21□□□□□ -0.93
PSMB4-202ENST00000466425 GLI2P10070 1586 aa9.21□□□□□ -0.93
PSMB4-202ENST00000466425 VGFO15240 615 aaPredicted RBP9.21□□□□□ -0.94
PSMB4-202ENST00000466425 DDX10Q13206 875 aaKnown RBP9.21□□□□□ -0.94
PSMB4-202ENST00000466425 EFCAB2Q5VUJ9 269 aa9.21□□□□□ -0.94
PSMB4-202ENST00000466425 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.94
PSMB4-202ENST00000466425 L3MBTL2Q969R5 705 aa9.21□□□□□ -0.94
PSMB4-202ENST00000466425 KIF15Q9NS87 1388 aa9.21□□□□□ -0.94
PSMB4-202ENST00000466425 MAP3K4Q9Y6R4 1608 aa9.2□□□□□ -0.94
PSMB4-202ENST00000466425 CCER2I3L3R5 266 aa9.2□□□□□ -0.94
PSMB4-202ENST00000466425 HNRNPMP52272 730 aaKnown RBP eCLIP9.2□□□□□ -0.94
PSMB4-202ENST00000466425 NUP155O75694 1391 aa9.2□□□□□ -0.94
PSMB4-202ENST00000466425 PZPP20742 1482 aa9.2□□□□□ -0.94
PSMB4-202ENST00000466425 MBD5Q9P267 1494 aa9.2□□□□□ -0.94
PSMB4-202ENST00000466425 KDM6BO15054 1643 aa9.2□□□□□ -0.94
PSMB4-202ENST00000466425 ADGBQ8N7X0 1667 aa9.2□□□□□ -0.94
PSMB4-202ENST00000466425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.19□□□□□ -0.94
PSMB4-202ENST00000466425 RGL2O15211 777 aa9.19□□□□□ -0.94
PSMB4-202ENST00000466425 DOK7Q18PE1 504 aa9.19□□□□□ -0.94
PSMB4-202ENST00000466425 ZFP91Q96JP5 570 aaPredicted RBP9.19□□□□□ -0.94
PSMB4-202ENST00000466425 PPRC1Q5VV67 1664 aaKnown RBP9.19□□□□□ -0.94
PSMB4-202ENST00000466425 PLCH2O75038 1416 aa9.18□□□□□ -0.94
PSMB4-202ENST00000466425 TPRNQ4KMQ1 711 aa9.18□□□□□ -0.94
PSMB4-202ENST00000466425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.18□□□□□ -0.94
PSMB4-202ENST00000466425 ARHGAP5Q13017 1502 aa9.17□□□□□ -0.94
PSMB4-202ENST00000466425 KDM5DQ9BY66 1539 aa9.17□□□□□ -0.94
PSMB4-202ENST00000466425 ASXL2Q76L83 1435 aa9.17□□□□□ -0.94
PSMB4-202ENST00000466425 HSPA5P11021 654 aaKnown RBP9.17□□□□□ -0.94
PSMB4-202ENST00000466425 IRX2Q9BZI1 471 aaPredicted RBP9.17□□□□□ -0.94
PSMB4-202ENST00000466425 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
PSMB4-202ENST00000466425 CROCC2H7BZ55 1655 aa9.16□□□□□ -0.94
PSMB4-202ENST00000466425 PREX2Q70Z35 1606 aa9.16□□□□□ -0.94
PSMB4-202ENST00000466425 WDR7Q9Y4E6 1490 aa9.16□□□□□ -0.94
PSMB4-202ENST00000466425 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
PSMB4-202ENST00000466425 TEX14Q8IWB6 1497 aa9.15□□□□□ -0.94
PSMB4-202ENST00000466425 CDC42BPAQ5VT25 1732 aa9.15□□□□□ -0.94
PSMB4-202ENST00000466425 STK25O00506 426 aa9.15□□□□□ -0.94
PSMB4-202ENST00000466425 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
PSMB4-202ENST00000466425 STK24Q9Y6E0 443 aa9.15□□□□□ -0.94
PSMB4-202ENST00000466425 ABCA9Q8IUA7 1624 aa9.15□□□□□ -0.94
PSMB4-202ENST00000466425 MAST1Q9Y2H9 1570 aa9.15□□□□□ -0.95
PSMB4-202ENST00000466425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.15□□□□□ -0.95
PSMB4-202ENST00000466425 EFCAB3Q8N7B9 438 aa9.14□□□□□ -0.95
PSMB4-202ENST00000466425 BCL11BQ9C0K0 894 aaPredicted RBP9.14□□□□□ -0.95
PSMB4-202ENST00000466425 ARAP3Q8WWN8 1544 aa9.14□□□□□ -0.95
PSMB4-202ENST00000466425 MYO5CQ9NQX4 1742 aa9.14□□□□□ -0.95
PSMB4-202ENST00000466425 ARID4BQ4LE39 1312 aaPredicted RBP9.13□□□□□ -0.95
PSMB4-202ENST00000466425 SAMD9LQ8IVG5 1584 aa9.13□□□□□ -0.95
PSMB4-202ENST00000466425 RTEL1-TNFRSF6BF6WH68 1400 aa9.13□□□□□ -0.95
PSMB4-202ENST00000466425 ERBINQ96RT1 1412 aa9.13□□□□□ -0.95
PSMB4-202ENST00000466425 RIMBP2O15034 1052 aa9.12□□□□□ -0.95
PSMB4-202ENST00000466425 HIRIP3Q9BW71 556 aaPredicted RBP9.12□□□□□ -0.95
PSMB4-202ENST00000466425 CFAP74Q9C0B2 1584 aa9.12□□□□□ -0.95
PSMB4-202ENST00000466425 SYCP2Q9BX26 1530 aa9.11□□□□□ -0.95
PSMB4-202ENST00000466425 DUOX2Q9NRD8 1548 aa9.11□□□□□ -0.95
PSMB4-202ENST00000466425 ARHGEF12Q9NZN5 1544 aa9.11□□□□□ -0.95
PSMB4-202ENST00000466425 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
PSMB4-202ENST00000466425 UHRF1BP1Q6BDS2 1440 aa9.11□□□□□ -0.95
PSMB4-202ENST00000466425 SPAG9O60271 1321 aaKnown RBP9.1□□□□□ -0.95
PSMB4-202ENST00000466425 G3V3G9 751 aa9.1□□□□□ -0.95
PSMB4-202ENST00000466425 FAM69CQ0P6D2 419 aa9.1□□□□□ -0.95
PSMB4-202ENST00000466425 NBPF8Q3BBV2 869 aa9.1□□□□□ -0.95
PSMB4-202ENST00000466425 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
PSMB4-202ENST00000466425 TTC37Q6PGP7 1564 aa9.1□□□□□ -0.95
PSMB4-202ENST00000466425 WASHC2AQ641Q2 1341 aa9.09□□□□□ -0.95
PSMB4-202ENST00000466425 CCDC144AA2RUR9 1427 aa9.09□□□□□ -0.95
PSMB4-202ENST00000466425 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
PSMB4-202ENST00000466425 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 1314.9 ms