RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 SPAG9O60271 1321 aaKnown RBP9.3□□□□□ -0.92
CDHR3-204ENST00000466351 HECW2Q9P2P5 1572 aa9.29□□□□□ -0.92
CDHR3-204ENST00000466351 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
CDHR3-204ENST00000466351 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
CDHR3-204ENST00000466351 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
CDHR3-204ENST00000466351 MLH3Q9UHC1 1453 aa9.28□□□□□ -0.92
CDHR3-204ENST00000466351 ADGRB3O60242 1522 aa9.28□□□□□ -0.92
CDHR3-204ENST00000466351 ST20-MTHFSA0A0A6YYL1 179 aa9.28□□□□□ -0.92
CDHR3-204ENST00000466351 PDE3BQ13370 1112 aa9.28□□□□□ -0.92
CDHR3-204ENST00000466351 PPRC1Q5VV67 1664 aaKnown RBP9.28□□□□□ -0.92
CDHR3-204ENST00000466351 BLMP54132 1417 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-204ENST00000466351 PPLO60437 1756 aa9.27□□□□□ -0.92
CDHR3-204ENST00000466351 PNISRQ8TF01 805 aaKnown RBP9.27□□□□□ -0.93
CDHR3-204ENST00000466351 NUDCQ9Y266 331 aa9.27□□□□□ -0.93
CDHR3-204ENST00000466351 NEO1Q92859 1461 aa9.27□□□□□ -0.93
CDHR3-204ENST00000466351 ABCA6Q8N139 1617 aa9.27□□□□□ -0.93
CDHR3-204ENST00000466351 USP32Q8NFA0 1604 aa9.27□□□□□ -0.93
CDHR3-204ENST00000466351 ASXL2Q76L83 1435 aa9.26□□□□□ -0.93
CDHR3-204ENST00000466351 TESK2Q96S53 571 aa9.26□□□□□ -0.93
CDHR3-204ENST00000466351 POGZQ7Z3K3 1410 aa9.25□□□□□ -0.93
CDHR3-204ENST00000466351 TMF1P82094 1093 aa9.25□□□□□ -0.93
CDHR3-204ENST00000466351 C1QBPQ07021 282 aaKnown RBP9.25□□□□□ -0.93
CDHR3-204ENST00000466351 CCDC184Q52MB2 194 aa9.25□□□□□ -0.93
CDHR3-204ENST00000466351 PIK3C2BO00750 1634 aa9.24□□□□□ -0.93
CDHR3-204ENST00000466351 PIK3C2GO75747 1445 aa9.24□□□□□ -0.93
CDHR3-204ENST00000466351 PER1O15534 1290 aaPredicted RBP9.24□□□□□ -0.93
CDHR3-204ENST00000466351 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
CDHR3-204ENST00000466351 FAM9BQ8IZU0 186 aa9.24□□□□□ -0.93
CDHR3-204ENST00000466351 TMC1Q8TDI8 760 aa9.24□□□□□ -0.93
CDHR3-204ENST00000466351 ASXL1Q8IXJ9 1541 aa9.24□□□□□ -0.93
CDHR3-204ENST00000466351 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
CDHR3-204ENST00000466351 MROH2AA6NES4 1674 aa9.23□□□□□ -0.93
CDHR3-204ENST00000466351 SLC4A2P04920 1241 aa9.23□□□□□ -0.93
CDHR3-204ENST00000466351 FRMPD1Q5SYB0 1578 aa9.22□□□□□ -0.93
CDHR3-204ENST00000466351 NGEFQ8N5V2 710 aa9.22□□□□□ -0.93
CDHR3-204ENST00000466351 CAMSAP1Q5T5Y3 1602 aa9.22□□□□□ -0.93
CDHR3-204ENST00000466351 DISP3Q9P2K9 1392 aa9.22□□□□□ -0.93
CDHR3-204ENST00000466351 RICTORQ6R327 1708 aa9.21□□□□□ -0.94
CDHR3-204ENST00000466351 ARHGAP31Q2M1Z3 1444 aa9.21□□□□□ -0.94
CDHR3-204ENST00000466351 GLI2P10070 1586 aa9.2□□□□□ -0.94
CDHR3-204ENST00000466351 REREQ9P2R6 1566 aa9.2□□□□□ -0.94
CDHR3-204ENST00000466351 KDM2AQ9Y2K7 1162 aa9.19□□□□□ -0.94
CDHR3-204ENST00000466351 U3KPZ7 1027 aaPredicted RBP9.19□□□□□ -0.94
CDHR3-204ENST00000466351 ABCC3O15438 1527 aa9.19□□□□□ -0.94
CDHR3-204ENST00000466351 RPGRIP1LQ68CZ1 1315 aa9.18□□□□□ -0.94
CDHR3-204ENST00000466351 BCANQ96GW7 911 aa9.18□□□□□ -0.94
CDHR3-204ENST00000466351 PUS7Q96PZ0 661 aaKnown RBP9.18□□□□□ -0.94
CDHR3-204ENST00000466351 QRICH2Q9H0J4 1663 aa9.18□□□□□ -0.94
CDHR3-204ENST00000466351 DIP2CQ9Y2E4 1556 aa9.17□□□□□ -0.94
CDHR3-204ENST00000466351 ZFYVE9O95405 1425 aa9.17□□□□□ -0.94
CDHR3-204ENST00000466351 NBPF1Q3BBV0 1214 aa9.17□□□□□ -0.94
CDHR3-204ENST00000466351 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
CDHR3-204ENST00000466351 ADGRB1O14514 1584 aa9.16□□□□□ -0.94
CDHR3-204ENST00000466351 UGGT1Q9NYU2 1555 aa9.16□□□□□ -0.94
CDHR3-204ENST00000466351 NOS1P29475 1434 aa9.16□□□□□ -0.94
CDHR3-204ENST00000466351 CD109Q6YHK3 1445 aa9.16□□□□□ -0.94
CDHR3-204ENST00000466351 ARHGEF28Q8N1W1 1705 aaKnown RBP9.16□□□□□ -0.94
CDHR3-204ENST00000466351 ERVK-7P63135 1459 aa9.15□□□□□ -0.94
CDHR3-204ENST00000466351 NPATQ14207 1427 aa9.15□□□□□ -0.94
CDHR3-204ENST00000466351 RGL3Q3MIN7 710 aa9.15□□□□□ -0.94
CDHR3-204ENST00000466351 AFAP1Q8N556 730 aa9.15□□□□□ -0.94
CDHR3-204ENST00000466351 CLTCQ00610 1675 aaKnown RBP9.14□□□□□ -0.95
CDHR3-204ENST00000466351 ANP32EQ9BTT0 268 aa9.14□□□□□ -0.95
CDHR3-204ENST00000466351 SIGLEC1Q9BZZ2 1709 aa9.14□□□□□ -0.95
CDHR3-204ENST00000466351 ANKRD26Q9UPS8 1709 aa9.14□□□□□ -0.95
CDHR3-204ENST00000466351 NINLQ9Y2I6 1382 aa9.13□□□□□ -0.95
CDHR3-204ENST00000466351 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
CDHR3-204ENST00000466351 NEXMIFQ5QGS0 1516 aa9.12□□□□□ -0.95
CDHR3-204ENST00000466351 KIF3BO15066 747 aa9.12□□□□□ -0.95
CDHR3-204ENST00000466351 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
CDHR3-204ENST00000466351 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
CDHR3-204ENST00000466351 POLR3GLQ9BT43 218 aa9.12□□□□□ -0.95
CDHR3-204ENST00000466351 PANK3Q9H999 370 aa9.12□□□□□ -0.95
CDHR3-204ENST00000466351 KNSTRNQ9Y448 316 aa9.12□□□□□ -0.95
CDHR3-204ENST00000466351 PREX1Q8TCU6 1659 aa9.12□□□□□ -0.95
CDHR3-204ENST00000466351 NSD2O96028 1365 aa9.12□□□□□ -0.95
CDHR3-204ENST00000466351 AGLP35573 1532 aa9.11□□□□□ -0.95
CDHR3-204ENST00000466351 RRP1P56182 461 aaKnown RBP9.11□□□□□ -0.95
CDHR3-204ENST00000466351 OSCARQ8IYS5 282 aa9.11□□□□□ -0.95
CDHR3-204ENST00000466351 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
CDHR3-204ENST00000466351 POLR3AO14802 1390 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-204ENST00000466351 SHPRHQ149N8 1683 aa9.1□□□□□ -0.95
CDHR3-204ENST00000466351 ZNF521Q96K83 1311 aa9.09□□□□□ -0.95
CDHR3-204ENST00000466351 CCDC136Q96JN2 1154 aa9.09□□□□□ -0.95
CDHR3-204ENST00000466351 TMEM131LA2VDJ0 1609 aa9.09□□□□□ -0.95
CDHR3-204ENST00000466351 MED14O60244 1454 aa9.08□□□□□ -0.96
CDHR3-204ENST00000466351 VIRMAQ69YN4 1812 aaKnown RBP9.08□□□□□ -0.96
CDHR3-204ENST00000466351 MS4A1P11836 297 aa9.07□□□□□ -0.96
CDHR3-204ENST00000466351 PPP2R1AP30153 589 aa9.07□□□□□ -0.96
CDHR3-204ENST00000466351 CENPJQ9HC77 1338 aaPredicted RBP9.06□□□□□ -0.96
CDHR3-204ENST00000466351 MYO5BQ9ULV0 1848 aa9.06□□□□□ -0.96
CDHR3-204ENST00000466351 CFAP65Q6ZU64 1925 aaKnown RBP9.06□□□□□ -0.96
CDHR3-204ENST00000466351 WDR43Q15061 677 aaKnown RBP eCLIP9.06□□□□□ -0.96
CDHR3-204ENST00000466351 C14orf93Q9H972 538 aaKnown RBP9.06□□□□□ -0.96
CDHR3-204ENST00000466351 DIP2BQ9P265 1576 aa9.06□□□□□ -0.96
CDHR3-204ENST00000466351 DLC1Q96QB1 1528 aa9.05□□□□□ -0.96
CDHR3-204ENST00000466351 ADGRB2O60241 1585 aa9.05□□□□□ -0.96
CDHR3-204ENST00000466351 NKTRP30414 1462 aaKnown RBP9.05□□□□□ -0.96
CDHR3-204ENST00000466351 TCERG1O14776 1098 aaKnown RBP9.05□□□□□ -0.96
CDHR3-204ENST00000466351 IRX6P78412 446 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms