RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
CMTM1-207ENST00000465057 PPRC1Q5VV67 1664 aaKnown RBP9.34□□□□□ -0.91
CMTM1-207ENST00000465057 RAPGEF2Q9Y4G8 1499 aa9.34□□□□□ -0.91
CMTM1-207ENST00000465057 TK2O00142 265 aa9.33□□□□□ -0.92
CMTM1-207ENST00000465057 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
CMTM1-207ENST00000465057 FBXW7Q969H0 707 aa9.33□□□□□ -0.92
CMTM1-207ENST00000465057 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
CMTM1-207ENST00000465057 ABCC2Q92887 1545 aa9.32□□□□□ -0.92
CMTM1-207ENST00000465057 UGGT2Q9NYU1 1516 aa9.32□□□□□ -0.92
CMTM1-207ENST00000465057 ZCCHC11Q5TAX3 1644 aaKnown RBP9.32□□□□□ -0.92
CMTM1-207ENST00000465057 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
CMTM1-207ENST00000465057 EPAS1Q99814 870 aa9.32□□□□□ -0.92
CMTM1-207ENST00000465057 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-207ENST00000465057 DDX12PQ92771 950 aa9.31□□□□□ -0.92
CMTM1-207ENST00000465057 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
CMTM1-207ENST00000465057 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
CMTM1-207ENST00000465057 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
CMTM1-207ENST00000465057 SLC4A5Q9BY07 1137 aa9.29□□□□□ -0.92
CMTM1-207ENST00000465057 ASXL2Q76L83 1435 aa9.29□□□□□ -0.92
CMTM1-207ENST00000465057 UHRF1BP1LA0JNW5 1464 aa9.28□□□□□ -0.92
CMTM1-207ENST00000465057 HRO43593 1189 aa9.28□□□□□ -0.92
CMTM1-207ENST00000465057 UACAQ9BZF9 1416 aa9.28□□□□□ -0.92
CMTM1-207ENST00000465057 GLI2P10070 1586 aa9.28□□□□□ -0.92
CMTM1-207ENST00000465057 MAP3K4Q9Y6R4 1608 aa9.27□□□□□ -0.92
CMTM1-207ENST00000465057 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
CMTM1-207ENST00000465057 VPS9D1Q9Y2B5 631 aa9.27□□□□□ -0.93
CMTM1-207ENST00000465057 PLB1Q6P1J6 1458 aa9.27□□□□□ -0.93
CMTM1-207ENST00000465057 KDM5BQ9UGL1 1544 aa9.26□□□□□ -0.93
CMTM1-207ENST00000465057 C6orf132Q5T0Z8 1188 aa9.26□□□□□ -0.93
CMTM1-207ENST00000465057 ZBED2Q9BTP6 218 aa9.26□□□□□ -0.93
CMTM1-207ENST00000465057 PPP1R3GB7ZBB8 358 aa9.25□□□□□ -0.93
CMTM1-207ENST00000465057 NBR1Q14596 966 aa9.25□□□□□ -0.93
CMTM1-207ENST00000465057 P3H3Q8IVL6 736 aa9.25□□□□□ -0.93
CMTM1-207ENST00000465057 EPRSP07814 1512 aaKnown RBP9.25□□□□□ -0.93
CMTM1-207ENST00000465057 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
CMTM1-207ENST00000465057 EN1Q05925 392 aaPredicted RBP9.24□□□□□ -0.93
CMTM1-207ENST00000465057 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
CMTM1-207ENST00000465057 PRXQ9BXM0 1461 aa9.23□□□□□ -0.93
CMTM1-207ENST00000465057 COL9A1P20849 921 aa9.23□□□□□ -0.93
CMTM1-207ENST00000465057 ABCA8O94911 1581 aa9.23□□□□□ -0.93
CMTM1-207ENST00000465057 GOLGA3Q08378 1498 aa9.21□□□□□ -0.93
CMTM1-207ENST00000465057 CFAP43Q8NDM7 1665 aa9.21□□□□□ -0.93
CMTM1-207ENST00000465057 BHMG1C9JSJ3 638 aaPredicted RBP9.21□□□□□ -0.94
CMTM1-207ENST00000465057 OSBPP22059 807 aa9.21□□□□□ -0.94
CMTM1-207ENST00000465057 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.94
CMTM1-207ENST00000465057 WDR7Q9Y4E6 1490 aa9.21□□□□□ -0.94
CMTM1-207ENST00000465057 MAP3K7O43318 606 aa9.2□□□□□ -0.94
CMTM1-207ENST00000465057 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
CMTM1-207ENST00000465057 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
CMTM1-207ENST00000465057 COL17A1Q9UMD9 1497 aaPredicted RBP9.2□□□□□ -0.94
CMTM1-207ENST00000465057 TSR1Q2NL82 804 aaKnown RBP9.19□□□□□ -0.94
CMTM1-207ENST00000465057 SAMD9Q5K651 1589 aa9.19□□□□□ -0.94
CMTM1-207ENST00000465057 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-207ENST00000465057 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
CMTM1-207ENST00000465057 TEX14Q8IWB6 1497 aa9.18□□□□□ -0.94
CMTM1-207ENST00000465057 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
CMTM1-207ENST00000465057 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-207ENST00000465057 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
CMTM1-207ENST00000465057 RAPGEF6Q8TEU7 1601 aa9.16□□□□□ -0.94
CMTM1-207ENST00000465057 ADGRL1O94910 1474 aa9.15□□□□□ -0.94
CMTM1-207ENST00000465057 ARID3CA6NKF2 412 aa9.15□□□□□ -0.94
CMTM1-207ENST00000465057 NBPF3Q9H094 633 aa9.15□□□□□ -0.94
CMTM1-207ENST00000465057 KIF21BO75037 1637 aa9.14□□□□□ -0.95
CMTM1-207ENST00000465057 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
CMTM1-207ENST00000465057 MRPL50Q8N5N7 158 aaKnown RBP9.14□□□□□ -0.95
CMTM1-207ENST00000465057 CERKQ8TCT0 537 aa9.14□□□□□ -0.95
CMTM1-207ENST00000465057 CD109Q6YHK3 1445 aa9.14□□□□□ -0.95
CMTM1-207ENST00000465057 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
CMTM1-207ENST00000465057 MAGI3Q5TCQ9 1506 aa9.13□□□□□ -0.95
CMTM1-207ENST00000465057 ABCA9Q8IUA7 1624 aa9.13□□□□□ -0.95
CMTM1-207ENST00000465057 SEMA3EO15041 775 aa9.12□□□□□ -0.95
CMTM1-207ENST00000465057 FAM9AQ8IZU1 332 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-207ENST00000465057 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
CMTM1-207ENST00000465057 ATP10BO94823 1461 aa9.12□□□□□ -0.95
CMTM1-207ENST00000465057 CDHR5Q9HBB8 845 aa9.11□□□□□ -0.95
CMTM1-207ENST00000465057 GOLGA8CPA6NN73 597 aa9.1□□□□□ -0.95
CMTM1-207ENST00000465057 RANGAP1P46060 587 aaPredicted RBP9.1□□□□□ -0.95
CMTM1-207ENST00000465057 PRSS12P56730 875 aa9.1□□□□□ -0.95
CMTM1-207ENST00000465057 CDCA7LQ96GN5 454 aa9.1□□□□□ -0.95
CMTM1-207ENST00000465057 HCSTQ9UBK5 93 aa9.1□□□□□ -0.95
CMTM1-207ENST00000465057 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
CMTM1-207ENST00000465057 FHOD3Q2V2M9 1422 aa9.1□□□□□ -0.95
CMTM1-207ENST00000465057 EEA1Q15075 1411 aa9.09□□□□□ -0.95
CMTM1-207ENST00000465057 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
CMTM1-207ENST00000465057 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
CMTM1-207ENST00000465057 NUP153P49790 1475 aaKnown RBP9.08□□□□□ -0.96
CMTM1-207ENST00000465057 PACS2Q86VP3 889 aa9.08□□□□□ -0.96
CMTM1-207ENST00000465057 WNT2BQ93097 391 aa9.08□□□□□ -0.96
CMTM1-207ENST00000465057 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
CMTM1-207ENST00000465057 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
CMTM1-207ENST00000465057 RBM27Q9P2N5 1060 aaKnown RBP9.06□□□□□ -0.96
CMTM1-207ENST00000465057 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
CMTM1-207ENST00000465057 FRMPD1Q5SYB0 1578 aa9.06□□□□□ -0.96
CMTM1-207ENST00000465057 EFCAB5A4FU69 1503 aa9.05□□□□□ -0.96
CMTM1-207ENST00000465057 ARAP3Q8WWN8 1544 aa9.05□□□□□ -0.96
CMTM1-207ENST00000465057 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
CMTM1-207ENST00000465057 SEPT9Q9UHD8 586 aaPredicted RBP9.05□□□□□ -0.96
CMTM1-207ENST00000465057 RICTORQ6R327 1708 aa9.05□□□□□ -0.96
CMTM1-207ENST00000465057 TTC37Q6PGP7 1564 aa9.04□□□□□ -0.96
CMTM1-207ENST00000465057 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms