RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ANKRD30BQ9BXX2 1392 aa20.18■□□□□ 0.82
LIMD1-203ENST00000465039 PLEKHG1Q9ULL1 1385 aa20.17■□□□□ 0.82
LIMD1-203ENST00000465039 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
LIMD1-203ENST00000465039 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
LIMD1-203ENST00000465039 LTKP29376 864 aa20.15■□□□□ 0.82
LIMD1-203ENST00000465039 NEXMIFQ5QGS0 1516 aa20.15■□□□□ 0.82
LIMD1-203ENST00000465039 DIP2AQ14689 1571 aa20.14■□□□□ 0.81
LIMD1-203ENST00000465039 FOXD1Q16676 465 aa20.14■□□□□ 0.81
LIMD1-203ENST00000465039 CHGAP10645 457 aaKnown RBP20.13■□□□□ 0.81
LIMD1-203ENST00000465039 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
LIMD1-203ENST00000465039 PPLO60437 1756 aa20.1■□□□□ 0.81
LIMD1-203ENST00000465039 CPS1P31327 1500 aa20.09■□□□□ 0.81
LIMD1-203ENST00000465039 PPP1R15AO75807 674 aaPredicted RBP20.09■□□□□ 0.81
LIMD1-203ENST00000465039 IQSEC2Q5JU85 1478 aa20.09■□□□□ 0.81
LIMD1-203ENST00000465039 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
LIMD1-203ENST00000465039 IFT172Q9UG01 1749 aa20.08■□□□□ 0.81
LIMD1-203ENST00000465039 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
LIMD1-203ENST00000465039 PIK3R4Q99570 1358 aa20.07■□□□□ 0.8
LIMD1-203ENST00000465039 VGFO15240 615 aaPredicted RBP20.06■□□□□ 0.8
LIMD1-203ENST00000465039 DHX57Q6P158 1386 aaKnown RBP20.06■□□□□ 0.8
LIMD1-203ENST00000465039 STAC3Q96MF2 364 aa20.05■□□□□ 0.8
LIMD1-203ENST00000465039 MYOM2P54296 1465 aa20.05■□□□□ 0.8
LIMD1-203ENST00000465039 TBX22Q9Y458 520 aa20.04■□□□□ 0.8
LIMD1-203ENST00000465039 NWD1Q149M9 1564 aa20.04■□□□□ 0.8
LIMD1-203ENST00000465039 ADAMTS13Q76LX8 1427 aa20.03■□□□□ 0.8
LIMD1-203ENST00000465039 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
LIMD1-203ENST00000465039 NKTRP30414 1462 aaKnown RBP20.02■□□□□ 0.8
LIMD1-203ENST00000465039 ZNF335Q9H4Z2 1342 aaPredicted RBP20.01■□□□□ 0.79
LIMD1-203ENST00000465039 NRXN1Q9ULB1 1477 aa20■□□□□ 0.79
LIMD1-203ENST00000465039 LAMC1P11047 1609 aa19.98■□□□□ 0.79
LIMD1-203ENST00000465039 PIK3C2GO75747 1445 aa19.97■□□□□ 0.79
LIMD1-203ENST00000465039 PRAG1Q86YV5 1406 aa19.97■□□□□ 0.79
LIMD1-203ENST00000465039 CHD2O14647 1828 aaKnown RBP19.97■□□□□ 0.79
LIMD1-203ENST00000465039 KCNA6P17658 529 aa19.96■□□□□ 0.79
LIMD1-203ENST00000465039 SETD1AO15047 1707 aaKnown RBP19.96■□□□□ 0.79
LIMD1-203ENST00000465039 CERKQ8TCT0 537 aa19.95■□□□□ 0.78
LIMD1-203ENST00000465039 BCANQ96GW7 911 aa19.95■□□□□ 0.78
LIMD1-203ENST00000465039 SLC26A8Q96RN1 970 aa19.95■□□□□ 0.78
LIMD1-203ENST00000465039 PCGF6Q9BYE7 350 aa19.95■□□□□ 0.78
LIMD1-203ENST00000465039 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
LIMD1-203ENST00000465039 RGL3Q3MIN7 710 aa19.94■□□□□ 0.78
LIMD1-203ENST00000465039 ALKQ9UM73 1620 aa19.94■□□□□ 0.78
LIMD1-203ENST00000465039 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
LIMD1-203ENST00000465039 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
LIMD1-203ENST00000465039 NUTM2DQ5VT03 806 aaPredicted RBP19.92■□□□□ 0.78
LIMD1-203ENST00000465039 NCOA3Q9Y6Q9 1424 aa19.92■□□□□ 0.78
LIMD1-203ENST00000465039 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
LIMD1-203ENST00000465039 ADGRF5Q8IZF2 1346 aa19.89■□□□□ 0.77
LIMD1-203ENST00000465039 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
LIMD1-203ENST00000465039 METP08581 1390 aa19.87■□□□□ 0.77
LIMD1-203ENST00000465039 TECPR2O15040 1411 aa19.85■□□□□ 0.77
LIMD1-203ENST00000465039 KIAA1210Q9ULL0 1709 aa19.85■□□□□ 0.77
LIMD1-203ENST00000465039 PTPRUQ92729 1446 aa19.85■□□□□ 0.77
LIMD1-203ENST00000465039 DCAF11Q8TEB1 546 aa19.84■□□□□ 0.77
LIMD1-203ENST00000465039 C14orf93Q9H972 538 aaKnown RBP19.84■□□□□ 0.77
LIMD1-203ENST00000465039 KNDC1Q76NI1 1749 aa19.84■□□□□ 0.77
LIMD1-203ENST00000465039 ASXL1Q8IXJ9 1541 aa19.82■□□□□ 0.76
LIMD1-203ENST00000465039 XIRP1Q702N8 1843 aaKnown RBP19.82■□□□□ 0.76
LIMD1-203ENST00000465039 AMOTL2Q9Y2J4 779 aa19.82■□□□□ 0.76
LIMD1-203ENST00000465039 TMEM94Q12767 1356 aa19.82■□□□□ 0.76
LIMD1-203ENST00000465039 LRPPRCP42704 1394 aaKnown RBP19.81■□□□□ 0.76
LIMD1-203ENST00000465039 ADGRB1O14514 1584 aa19.8■□□□□ 0.76
LIMD1-203ENST00000465039 FBXO41Q8TF61 875 aa19.8■□□□□ 0.76
LIMD1-203ENST00000465039 ABCC11Q96J66 1382 aa19.8■□□□□ 0.76
LIMD1-203ENST00000465039 DCCP43146 1447 aa19.79■□□□□ 0.76
LIMD1-203ENST00000465039 PROSER2Q86WR7 435 aaPredicted RBP19.79■□□□□ 0.76
LIMD1-203ENST00000465039 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
LIMD1-203ENST00000465039 YTHDC2Q9H6S0 1430 aaKnown RBP19.77■□□□□ 0.76
LIMD1-203ENST00000465039 DLC1Q96QB1 1528 aa19.77■□□□□ 0.76
LIMD1-203ENST00000465039 TIMELESSQ9UNS1 1208 aa19.77■□□□□ 0.76
LIMD1-203ENST00000465039 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
LIMD1-203ENST00000465039 MSH6P52701 1360 aa19.76■□□□□ 0.75
LIMD1-203ENST00000465039 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
LIMD1-203ENST00000465039 L3MBTL2Q969R5 705 aa19.76■□□□□ 0.75
LIMD1-203ENST00000465039 SIRT1Q96EB6 747 aa19.76■□□□□ 0.75
LIMD1-203ENST00000465039 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
LIMD1-203ENST00000465039 ADGRL3Q9HAR2 1447 aa19.75■□□□□ 0.75
LIMD1-203ENST00000465039 TOM1O60784 492 aa19.74■□□□□ 0.75
LIMD1-203ENST00000465039 NEUROD1Q13562 356 aa19.73■□□□□ 0.75
LIMD1-203ENST00000465039 CFAP70Q5T0N1 1121 aa19.73■□□□□ 0.75
LIMD1-203ENST00000465039 KDM2AQ9Y2K7 1162 aa19.73■□□□□ 0.75
LIMD1-203ENST00000465039 ROBO2Q9HCK4 1378 aa19.72■□□□□ 0.75
LIMD1-203ENST00000465039 C19orf44Q9H6X5 657 aa19.71■□□□□ 0.75
LIMD1-203ENST00000465039 TRPM1Q7Z4N2 1603 aa19.69■□□□□ 0.74
LIMD1-203ENST00000465039 NALCNQ8IZF0 1738 aa19.69■□□□□ 0.74
LIMD1-203ENST00000465039 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.69■□□□□ 0.74
LIMD1-203ENST00000465039 UBAP1LF5GYI3 381 aa19.69■□□□□ 0.74
LIMD1-203ENST00000465039 CDC42BPGQ6DT37 1551 aa19.69■□□□□ 0.74
LIMD1-203ENST00000465039 CADPS2Q86UW7 1296 aa19.68■□□□□ 0.74
LIMD1-203ENST00000465039 TMEM132EQ6IEE7 984 aa19.67■□□□□ 0.74
LIMD1-203ENST00000465039 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
LIMD1-203ENST00000465039 GPRASP1Q5JY77 1395 aa19.66■□□□□ 0.74
LIMD1-203ENST00000465039 C14orf37Q86TY3 774 aa19.65■□□□□ 0.74
LIMD1-203ENST00000465039 RALGAPBQ86X10 1494 aa19.65■□□□□ 0.74
LIMD1-203ENST00000465039 ADGRB2O60241 1585 aa19.65■□□□□ 0.74
LIMD1-203ENST00000465039 ARHGEF28Q8N1W1 1705 aaKnown RBP19.64■□□□□ 0.73
LIMD1-203ENST00000465039 ATF3P18847 181 aa19.63■□□□□ 0.73
LIMD1-203ENST00000465039 STK26Q9P289 416 aa19.62■□□□□ 0.73
LIMD1-203ENST00000465039 RBM33Q96EV2 1170 aaKnown RBP19.6■□□□□ 0.73
LIMD1-203ENST00000465039 MST1RQ04912 1400 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms