RNA–Protein interactions for RNA: ENST00000465007.1

ATP1A3-203, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 255 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-203ENST00000465007 RBM33Q96EV2 1170 aaKnown RBP23.1■■□□□ 1.29
ATP1A3-203ENST00000465007 MSH6P52701 1360 aa23.1■■□□□ 1.29
ATP1A3-203ENST00000465007 KDM5AP29375 1690 aaKnown RBP23.09■■□□□ 1.29
ATP1A3-203ENST00000465007 ADGRB3O60242 1522 aa23.08■■□□□ 1.28
ATP1A3-203ENST00000465007 ITGAEP38570 1179 aa23.07■■□□□ 1.28
ATP1A3-203ENST00000465007 SLAIN2Q9P270 581 aa23.05■■□□□ 1.28
ATP1A3-203ENST00000465007 PLEKHG1Q9ULL1 1385 aa23.03■■□□□ 1.28
ATP1A3-203ENST00000465007 RIMS2Q9UQ26 1411 aa23.03■■□□□ 1.28
ATP1A3-203ENST00000465007 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
ATP1A3-203ENST00000465007 NKTRP30414 1462 aaKnown RBP23.02■■□□□ 1.28
ATP1A3-203ENST00000465007 TET3O43151 1660 aa23.01■■□□□ 1.27
ATP1A3-203ENST00000465007 NUP155O75694 1391 aa23■■□□□ 1.27
ATP1A3-203ENST00000465007 NUTM2DQ5VT03 806 aaPredicted RBP22.99■■□□□ 1.27
ATP1A3-203ENST00000465007 ROCK1Q13464 1354 aa22.99■■□□□ 1.27
ATP1A3-203ENST00000465007 ATF3P18847 181 aa22.98■■□□□ 1.27
ATP1A3-203ENST00000465007 ZFYVE9O95405 1425 aa22.95■■□□□ 1.26
ATP1A3-203ENST00000465007 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
ATP1A3-203ENST00000465007 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
ATP1A3-203ENST00000465007 C19orf44Q9H6X5 657 aa22.93■■□□□ 1.26
ATP1A3-203ENST00000465007 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
ATP1A3-203ENST00000465007 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
ATP1A3-203ENST00000465007 RGS17Q9UGC6 210 aaPredicted RBP22.92■■□□□ 1.26
ATP1A3-203ENST00000465007 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
ATP1A3-203ENST00000465007 MEX3CQ5U5Q3 659 aaKnown RBP22.91■■□□□ 1.26
ATP1A3-203ENST00000465007 ROBO1Q9Y6N7 1651 aa22.9■■□□□ 1.26
ATP1A3-203ENST00000465007 JCADQ9P266 1359 aa22.9■■□□□ 1.26
ATP1A3-203ENST00000465007 NWD1Q149M9 1564 aa22.9■■□□□ 1.26
ATP1A3-203ENST00000465007 PIK3R4Q99570 1358 aa22.89■■□□□ 1.26
ATP1A3-203ENST00000465007 GCC2Q8IWJ2 1684 aa22.88■■□□□ 1.25
ATP1A3-203ENST00000465007 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
ATP1A3-203ENST00000465007 TMEM131LA2VDJ0 1609 aa22.88■■□□□ 1.25
ATP1A3-203ENST00000465007 UNC13BO14795 1591 aa22.88■■□□□ 1.25
ATP1A3-203ENST00000465007 POTEAQ6S8J7 498 aa22.85■■□□□ 1.25
ATP1A3-203ENST00000465007 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
ATP1A3-203ENST00000465007 DIP2AQ14689 1571 aa22.81■■□□□ 1.24
ATP1A3-203ENST00000465007 IQGAP3Q86VI3 1631 aa22.81■■□□□ 1.24
ATP1A3-203ENST00000465007 ADAMTS13Q76LX8 1427 aa22.81■■□□□ 1.24
ATP1A3-203ENST00000465007 E9PCH4 1651 aa22.81■■□□□ 1.24
ATP1A3-203ENST00000465007 CHD2O14647 1828 aaKnown RBP22.8■■□□□ 1.24
ATP1A3-203ENST00000465007 PHLPP1O60346 1717 aa22.79■■□□□ 1.24
ATP1A3-203ENST00000465007 TRPM2O94759 1503 aa22.79■■□□□ 1.24
ATP1A3-203ENST00000465007 ZNF772Q68DY9 489 aaPredicted RBP22.79■■□□□ 1.24
ATP1A3-203ENST00000465007 MYO5BQ9ULV0 1848 aa22.78■■□□□ 1.24
ATP1A3-203ENST00000465007 TRIM52Q96A61 297 aa22.76■■□□□ 1.23
ATP1A3-203ENST00000465007 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
ATP1A3-203ENST00000465007 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
ATP1A3-203ENST00000465007 NUTM2AQ8IVF1 878 aaPredicted RBP22.74■■□□□ 1.23
ATP1A3-203ENST00000465007 BRINP3Q76B58 766 aa22.72■■□□□ 1.23
ATP1A3-203ENST00000465007 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
ATP1A3-203ENST00000465007 LRRC59Q96AG4 307 aaKnown RBP22.7■■□□□ 1.22
ATP1A3-203ENST00000465007 DCCP43146 1447 aa22.69■■□□□ 1.22
ATP1A3-203ENST00000465007 PTPRUQ92729 1446 aa22.68■■□□□ 1.22
ATP1A3-203ENST00000465007 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
ATP1A3-203ENST00000465007 RXRBP28702 533 aa22.66■■□□□ 1.22
ATP1A3-203ENST00000465007 METP08581 1390 aa22.65■■□□□ 1.22
ATP1A3-203ENST00000465007 COL16A1Q07092 1604 aaPredicted RBP22.65■■□□□ 1.22
ATP1A3-203ENST00000465007 SLC4A1APQ9BWU0 796 aaKnown RBP22.65■■□□□ 1.22
ATP1A3-203ENST00000465007 SETBP1Q9Y6X0 1596 aa22.63■■□□□ 1.21
ATP1A3-203ENST00000465007 AHDC1Q5TGY3 1603 aaPredicted RBP22.63■■□□□ 1.21
ATP1A3-203ENST00000465007 SPHKAPQ2M3C7 1700 aa22.62■■□□□ 1.21
ATP1A3-203ENST00000465007 RPGRIP1LQ68CZ1 1315 aa22.61■■□□□ 1.21
ATP1A3-203ENST00000465007 NAIPQ13075 1403 aa22.58■■□□□ 1.21
ATP1A3-203ENST00000465007 RRBP1Q9P2E9 1410 aaKnown RBP22.58■■□□□ 1.21
ATP1A3-203ENST00000465007 ASXL1Q8IXJ9 1541 aa22.58■■□□□ 1.21
ATP1A3-203ENST00000465007 LRP6O75581 1613 aa22.58■■□□□ 1.21
ATP1A3-203ENST00000465007 C8orf37Q96NL8 207 aa22.58■■□□□ 1.21
ATP1A3-203ENST00000465007 MST1RQ04912 1400 aa22.57■■□□□ 1.2
ATP1A3-203ENST00000465007 ADGRL3Q9HAR2 1447 aa22.57■■□□□ 1.2
ATP1A3-203ENST00000465007 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
ATP1A3-203ENST00000465007 AFF2P51816 1311 aa22.57■■□□□ 1.2
ATP1A3-203ENST00000465007 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
ATP1A3-203ENST00000465007 DDX17Q92841 729 aaKnown RBP22.54■■□□□ 1.2
ATP1A3-203ENST00000465007 SHPRHQ149N8 1683 aa22.54■■□□□ 1.2
ATP1A3-203ENST00000465007 XRN1Q8IZH2 1706 aaKnown RBP22.54■■□□□ 1.2
ATP1A3-203ENST00000465007 NEXMIFQ5QGS0 1516 aa22.52■■□□□ 1.2
ATP1A3-203ENST00000465007 ADAMTS2O95450 1211 aa22.52■■□□□ 1.2
ATP1A3-203ENST00000465007 QTRT2Q9H974 415 aaKnown RBP22.52■■□□□ 1.2
ATP1A3-203ENST00000465007 CLTCL1P53675 1640 aa22.52■■□□□ 1.2
ATP1A3-203ENST00000465007 NRXN3Q9Y4C0 1643 aa22.52■■□□□ 1.2
ATP1A3-203ENST00000465007 UPF1Q92900 1129 aaKnown RBP eCLIP22.51■■□□□ 1.19
ATP1A3-203ENST00000465007 KIF1BO60333 1816 aa22.5■■□□□ 1.19
ATP1A3-203ENST00000465007 HFM1A2PYH4 1435 aa22.5■■□□□ 1.19
ATP1A3-203ENST00000465007 RBM6P78332 1123 aaKnown RBP22.49■■□□□ 1.19
ATP1A3-203ENST00000465007 ORAI2Q96SN7 254 aa22.48■■□□□ 1.19
ATP1A3-203ENST00000465007 C1orf167Q5SNV9 1468 aa22.47■■□□□ 1.19
ATP1A3-203ENST00000465007 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
ATP1A3-203ENST00000465007 PNPLA6Q8IY17 1366 aa22.47■■□□□ 1.19
ATP1A3-203ENST00000465007 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
ATP1A3-203ENST00000465007 ESCO1Q5FWF5 840 aa22.46■■□□□ 1.19
ATP1A3-203ENST00000465007 ROBO2Q9HCK4 1378 aa22.46■■□□□ 1.19
ATP1A3-203ENST00000465007 STK26Q9P289 416 aa22.45■■□□□ 1.18
ATP1A3-203ENST00000465007 SETD1AO15047 1707 aaKnown RBP22.45■■□□□ 1.18
ATP1A3-203ENST00000465007 CCDC144AA2RUR9 1427 aa22.44■■□□□ 1.18
ATP1A3-203ENST00000465007 FOXD1Q16676 465 aa22.44■■□□□ 1.18
ATP1A3-203ENST00000465007 CDK12Q9NYV4 1490 aaPredicted RBP22.43■■□□□ 1.18
ATP1A3-203ENST00000465007 ACIN1Q9UKV3 1341 aaKnown RBP22.43■■□□□ 1.18
ATP1A3-203ENST00000465007 USP21Q9UK80 565 aa22.43■■□□□ 1.18
ATP1A3-203ENST00000465007 SOS2Q07890 1332 aaPredicted RBP22.42■■□□□ 1.18
ATP1A3-203ENST00000465007 NPHP3Q7Z494 1330 aa22.42■■□□□ 1.18
ATP1A3-203ENST00000465007 NHSL1Q5SYE7 1610 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms