RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 ADGRF5Q8IZF2 1346 aa13.49□□□□□ -0.25
ATF3-207ENST00000464547 TMF1P82094 1093 aa13.49□□□□□ -0.25
ATF3-207ENST00000464547 SIGLEC1Q9BZZ2 1709 aa13.48□□□□□ -0.25
ATF3-207ENST00000464547 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
ATF3-207ENST00000464547 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
ATF3-207ENST00000464547 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
ATF3-207ENST00000464547 SYNMO15061 1565 aa13.46□□□□□ -0.25
ATF3-207ENST00000464547 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATF3-207ENST00000464547 PIK3C2BO00750 1634 aa13.46□□□□□ -0.26
ATF3-207ENST00000464547 REREQ9P2R6 1566 aa13.45□□□□□ -0.26
ATF3-207ENST00000464547 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
ATF3-207ENST00000464547 CNGB1Q14028 1251 aaPredicted RBP13.45□□□□□ -0.26
ATF3-207ENST00000464547 KIF13AQ9H1H9 1805 aa13.44□□□□□ -0.26
ATF3-207ENST00000464547 RALBP1Q15311 655 aa13.44□□□□□ -0.26
ATF3-207ENST00000464547 FAM9BQ8IZU0 186 aa13.44□□□□□ -0.26
ATF3-207ENST00000464547 PPLO60437 1756 aa13.44□□□□□ -0.26
ATF3-207ENST00000464547 CFAP65Q6ZU64 1925 aaKnown RBP13.44□□□□□ -0.26
ATF3-207ENST00000464547 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
ATF3-207ENST00000464547 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
ATF3-207ENST00000464547 AGLP35573 1532 aa13.44□□□□□ -0.26
ATF3-207ENST00000464547 PER1O15534 1290 aaPredicted RBP13.43□□□□□ -0.26
ATF3-207ENST00000464547 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
ATF3-207ENST00000464547 PANK3Q9H999 370 aa13.42□□□□□ -0.26
ATF3-207ENST00000464547 PIK3C2GO75747 1445 aa13.41□□□□□ -0.26
ATF3-207ENST00000464547 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
ATF3-207ENST00000464547 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
ATF3-207ENST00000464547 IDI1Q13907 227 aa13.4□□□□□ -0.26
ATF3-207ENST00000464547 SLC52A1Q9NWF4 448 aa13.4□□□□□ -0.26
ATF3-207ENST00000464547 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
ATF3-207ENST00000464547 SUPT16HQ9Y5B9 1047 aaKnown RBP13.4□□□□□ -0.26
ATF3-207ENST00000464547 PARD3Q8TEW0 1356 aa13.4□□□□□ -0.26
ATF3-207ENST00000464547 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
ATF3-207ENST00000464547 CDCA8Q53HL2 280 aa13.39□□□□□ -0.27
ATF3-207ENST00000464547 BRD4O60885 1362 aaPredicted RBP13.39□□□□□ -0.27
ATF3-207ENST00000464547 NEXMIFQ5QGS0 1516 aa13.39□□□□□ -0.27
ATF3-207ENST00000464547 PNISRQ8TF01 805 aaKnown RBP13.38□□□□□ -0.27
ATF3-207ENST00000464547 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
ATF3-207ENST00000464547 MYO3AQ8NEV4 1616 aa13.37□□□□□ -0.27
ATF3-207ENST00000464547 ARHGEF40Q8TER5 1519 aa13.37□□□□□ -0.27
ATF3-207ENST00000464547 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
ATF3-207ENST00000464547 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
ATF3-207ENST00000464547 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
ATF3-207ENST00000464547 SLC24A1O60721 1099 aa13.36□□□□□ -0.27
ATF3-207ENST00000464547 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
ATF3-207ENST00000464547 ZBED9Q6R2W3 1325 aa13.36□□□□□ -0.27
ATF3-207ENST00000464547 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
ATF3-207ENST00000464547 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
ATF3-207ENST00000464547 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
ATF3-207ENST00000464547 CC2D1BQ5T0F9 858 aaKnown RBP13.34□□□□□ -0.27
ATF3-207ENST00000464547 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
ATF3-207ENST00000464547 CENPJQ9HC77 1338 aaPredicted RBP13.34□□□□□ -0.27
ATF3-207ENST00000464547 KDM5AP29375 1690 aaKnown RBP13.34□□□□□ -0.27
ATF3-207ENST00000464547 SBNO2Q9Y2G9 1366 aa13.33□□□□□ -0.27
ATF3-207ENST00000464547 TMEM132EQ6IEE7 984 aa13.33□□□□□ -0.28
ATF3-207ENST00000464547 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
ATF3-207ENST00000464547 MYOM1P52179 1685 aa13.33□□□□□ -0.28
ATF3-207ENST00000464547 LRPPRCP42704 1394 aaKnown RBP13.32□□□□□ -0.28
ATF3-207ENST00000464547 MLECQ14165 292 aa13.32□□□□□ -0.28
ATF3-207ENST00000464547 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
ATF3-207ENST00000464547 FKBP8Q14318 412 aa13.31□□□□□ -0.28
ATF3-207ENST00000464547 MYO5BQ9ULV0 1848 aa13.31□□□□□ -0.28
ATF3-207ENST00000464547 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
ATF3-207ENST00000464547 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
ATF3-207ENST00000464547 KNSTRNQ9Y448 316 aa13.3□□□□□ -0.28
ATF3-207ENST00000464547 NEFLP07196 543 aa13.29□□□□□ -0.28
ATF3-207ENST00000464547 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
ATF3-207ENST00000464547 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
ATF3-207ENST00000464547 NPC1L1Q9UHC9 1359 aa13.28□□□□□ -0.28
ATF3-207ENST00000464547 A2ML1A8K2U0 1454 aa13.26□□□□□ -0.29
ATF3-207ENST00000464547 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
ATF3-207ENST00000464547 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
ATF3-207ENST00000464547 PPP2R1AP30153 589 aa13.25□□□□□ -0.29
ATF3-207ENST00000464547 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
ATF3-207ENST00000464547 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
ATF3-207ENST00000464547 INSRP06213 1382 aa13.24□□□□□ -0.29
ATF3-207ENST00000464547 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
ATF3-207ENST00000464547 POTEDQ86YR6 584 aa13.23□□□□□ -0.29
ATF3-207ENST00000464547 PUS7Q96PZ0 661 aaKnown RBP13.23□□□□□ -0.29
ATF3-207ENST00000464547 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
ATF3-207ENST00000464547 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
ATF3-207ENST00000464547 ALKQ9UM73 1620 aa13.22□□□□□ -0.29
ATF3-207ENST00000464547 MSH5O43196 834 aa13.22□□□□□ -0.29
ATF3-207ENST00000464547 BCANQ96GW7 911 aa13.22□□□□□ -0.29
ATF3-207ENST00000464547 STK26Q9P289 416 aa13.22□□□□□ -0.29
ATF3-207ENST00000464547 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
ATF3-207ENST00000464547 EVC2Q86UK5 1308 aa13.21□□□□□ -0.29
ATF3-207ENST00000464547 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
ATF3-207ENST00000464547 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.3
ATF3-207ENST00000464547 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
ATF3-207ENST00000464547 SLC12A5Q9H2X9 1139 aa13.2□□□□□ -0.3
ATF3-207ENST00000464547 PTPRMP28827 1452 aa13.2□□□□□ -0.3
ATF3-207ENST00000464547 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
ATF3-207ENST00000464547 TNRQ92752 1358 aa13.19□□□□□ -0.3
ATF3-207ENST00000464547 NSD3Q9BZ95 1437 aa13.18□□□□□ -0.3
ATF3-207ENST00000464547 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATF3-207ENST00000464547 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATF3-207ENST00000464547 PRAM1Q96QH2 718 aa13.17□□□□□ -0.3
ATF3-207ENST00000464547 CABP2Q9NPB3 220 aa13.17□□□□□ -0.3
ATF3-207ENST00000464547 IRX6P78412 446 aaPredicted RBP13.16□□□□□ -0.3
ATF3-207ENST00000464547 POGKQ9P215 609 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms