RNA–Protein interactions for RNA: ENST00000464429.1

CACNA1D-204, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-204ENST00000464429 PCGF6Q9BYE7 350 aa12.94□□□□□ -0.34
CACNA1D-204ENST00000464429 TMEM131LA2VDJ0 1609 aa12.94□□□□□ -0.34
CACNA1D-204ENST00000464429 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
CACNA1D-204ENST00000464429 SLIT1O75093 1534 aa12.93□□□□□ -0.34
CACNA1D-204ENST00000464429 POLR1AO95602 1720 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-204ENST00000464429 KIF1BO60333 1816 aa12.92□□□□□ -0.34
CACNA1D-204ENST00000464429 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
CACNA1D-204ENST00000464429 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
CACNA1D-204ENST00000464429 IDI1Q13907 227 aa12.9□□□□□ -0.34
CACNA1D-204ENST00000464429 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
CACNA1D-204ENST00000464429 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
CACNA1D-204ENST00000464429 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
CACNA1D-204ENST00000464429 TMEM2Q9UHN6 1383 aa12.89□□□□□ -0.35
CACNA1D-204ENST00000464429 MYO5BQ9ULV0 1848 aa12.88□□□□□ -0.35
CACNA1D-204ENST00000464429 DSG3P32926 999 aa12.88□□□□□ -0.35
CACNA1D-204ENST00000464429 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
CACNA1D-204ENST00000464429 SCAF11Q99590 1463 aaKnown RBP12.87□□□□□ -0.35
CACNA1D-204ENST00000464429 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
CACNA1D-204ENST00000464429 ZFYVE9O95405 1425 aa12.87□□□□□ -0.35
CACNA1D-204ENST00000464429 HSPA2P54652 639 aa12.86□□□□□ -0.35
CACNA1D-204ENST00000464429 NEXMIFQ5QGS0 1516 aa12.86□□□□□ -0.35
CACNA1D-204ENST00000464429 STRCQ7RTU9 1775 aa12.86□□□□□ -0.35
CACNA1D-204ENST00000464429 SPATA31E1Q6ZUB1 1445 aa12.86□□□□□ -0.35
CACNA1D-204ENST00000464429 MED14O60244 1454 aa12.85□□□□□ -0.35
CACNA1D-204ENST00000464429 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
CACNA1D-204ENST00000464429 IQGAP1P46940 1657 aa12.84□□□□□ -0.35
CACNA1D-204ENST00000464429 IFT172Q9UG01 1749 aa12.84□□□□□ -0.35
CACNA1D-204ENST00000464429 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
CACNA1D-204ENST00000464429 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
CACNA1D-204ENST00000464429 PPLO60437 1756 aa12.83□□□□□ -0.36
CACNA1D-204ENST00000464429 ANKLE2Q86XL3 938 aa12.82□□□□□ -0.36
CACNA1D-204ENST00000464429 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
CACNA1D-204ENST00000464429 NPHP4O75161 1426 aaPredicted RBP12.81□□□□□ -0.36
CACNA1D-204ENST00000464429 MYOM2P54296 1465 aa12.81□□□□□ -0.36
CACNA1D-204ENST00000464429 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.81□□□□□ -0.36
CACNA1D-204ENST00000464429 EID1Q9Y6B2 187 aa12.81□□□□□ -0.36
CACNA1D-204ENST00000464429 RPGRIP1LQ68CZ1 1315 aa12.81□□□□□ -0.36
CACNA1D-204ENST00000464429 PLEKHG1Q9ULL1 1385 aa12.81□□□□□ -0.36
CACNA1D-204ENST00000464429 HDGFP51858 240 aaKnown RBP12.8□□□□□ -0.36
CACNA1D-204ENST00000464429 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
CACNA1D-204ENST00000464429 CLSPNQ9HAW4 1339 aa12.8□□□□□ -0.36
CACNA1D-204ENST00000464429 ZNF326Q5BKZ1 582 aaKnown RBP12.79□□□□□ -0.36
CACNA1D-204ENST00000464429 PPP1R15AO75807 674 aaPredicted RBP12.78□□□□□ -0.36
CACNA1D-204ENST00000464429 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
CACNA1D-204ENST00000464429 LTKP29376 864 aa12.77□□□□□ -0.37
CACNA1D-204ENST00000464429 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
CACNA1D-204ENST00000464429 NRXN3Q9Y4C0 1643 aa12.77□□□□□ -0.37
CACNA1D-204ENST00000464429 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
CACNA1D-204ENST00000464429 LAMC1P11047 1609 aa12.75□□□□□ -0.37
CACNA1D-204ENST00000464429 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
CACNA1D-204ENST00000464429 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
CACNA1D-204ENST00000464429 STAC3Q96MF2 364 aa12.74□□□□□ -0.37
CACNA1D-204ENST00000464429 NWD1Q149M9 1564 aa12.73□□□□□ -0.37
CACNA1D-204ENST00000464429 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
CACNA1D-204ENST00000464429 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
CACNA1D-204ENST00000464429 SETD1AO15047 1707 aaKnown RBP12.73□□□□□ -0.37
CACNA1D-204ENST00000464429 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
CACNA1D-204ENST00000464429 ABCB7O75027 752 aa12.71□□□□□ -0.37
CACNA1D-204ENST00000464429 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
CACNA1D-204ENST00000464429 ALKQ9UM73 1620 aa12.7□□□□□ -0.38
CACNA1D-204ENST00000464429 NUTM2DQ5VT03 806 aaPredicted RBP12.7□□□□□ -0.38
CACNA1D-204ENST00000464429 CCER1Q8TC90 406 aaPredicted RBP12.7□□□□□ -0.38
CACNA1D-204ENST00000464429 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
CACNA1D-204ENST00000464429 CPS1P31327 1500 aa12.69□□□□□ -0.38
CACNA1D-204ENST00000464429 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
CACNA1D-204ENST00000464429 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
CACNA1D-204ENST00000464429 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
CACNA1D-204ENST00000464429 ADGRF5Q8IZF2 1346 aa12.68□□□□□ -0.38
CACNA1D-204ENST00000464429 BCANQ96GW7 911 aa12.68□□□□□ -0.38
CACNA1D-204ENST00000464429 TBX22Q9Y458 520 aa12.68□□□□□ -0.38
CACNA1D-204ENST00000464429 PRAG1Q86YV5 1406 aa12.68□□□□□ -0.38
CACNA1D-204ENST00000464429 ASXL1Q8IXJ9 1541 aa12.67□□□□□ -0.38
CACNA1D-204ENST00000464429 LTBP4Q8N2S1 1624 aa12.67□□□□□ -0.38
CACNA1D-204ENST00000464429 NEUROD1Q13562 356 aa12.67□□□□□ -0.38
CACNA1D-204ENST00000464429 CHD2O14647 1828 aaKnown RBP12.67□□□□□ -0.38
CACNA1D-204ENST00000464429 KNDC1Q76NI1 1749 aa12.66□□□□□ -0.38
CACNA1D-204ENST00000464429 DCAF11Q8TEB1 546 aa12.66□□□□□ -0.38
CACNA1D-204ENST00000464429 PTCH1Q13635 1447 aa12.65□□□□□ -0.38
CACNA1D-204ENST00000464429 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
CACNA1D-204ENST00000464429 SLC26A8Q96RN1 970 aa12.65□□□□□ -0.38
CACNA1D-204ENST00000464429 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
CACNA1D-204ENST00000464429 ZNF335Q9H4Z2 1342 aaPredicted RBP12.64□□□□□ -0.39
CACNA1D-204ENST00000464429 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
CACNA1D-204ENST00000464429 TIMELESSQ9UNS1 1208 aa12.64□□□□□ -0.39
CACNA1D-204ENST00000464429 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
CACNA1D-204ENST00000464429 TECPR2O15040 1411 aa12.63□□□□□ -0.39
CACNA1D-204ENST00000464429 TRPM1Q7Z4N2 1603 aa12.63□□□□□ -0.39
CACNA1D-204ENST00000464429 METP08581 1390 aa12.63□□□□□ -0.39
CACNA1D-204ENST00000464429 KCNA6P17658 529 aa12.62□□□□□ -0.39
CACNA1D-204ENST00000464429 C14orf93Q9H972 538 aaKnown RBP12.62□□□□□ -0.39
CACNA1D-204ENST00000464429 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
CACNA1D-204ENST00000464429 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
CACNA1D-204ENST00000464429 KDM2AQ9Y2K7 1162 aa12.61□□□□□ -0.39
CACNA1D-204ENST00000464429 LRPPRCP42704 1394 aaKnown RBP12.6□□□□□ -0.39
CACNA1D-204ENST00000464429 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
CACNA1D-204ENST00000464429 DLC1Q96QB1 1528 aa12.6□□□□□ -0.39
CACNA1D-204ENST00000464429 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
CACNA1D-204ENST00000464429 ZBTB22O15209 634 aa12.59□□□□□ -0.39
CACNA1D-204ENST00000464429 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
CACNA1D-204ENST00000464429 CFAP70Q5T0N1 1121 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms