RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 SYNMO15061 1565 aa29.86■■■□□ 2.37
PDLIM2-216ENST00000464275 NRXN1Q9ULB1 1477 aa29.85■■■□□ 2.37
PDLIM2-216ENST00000464275 AGLP35573 1532 aa29.83■■■□□ 2.37
PDLIM2-216ENST00000464275 PREX1Q8TCU6 1659 aa29.82■■■□□ 2.36
PDLIM2-216ENST00000464275 TMF1P82094 1093 aa29.8■■■□□ 2.36
PDLIM2-216ENST00000464275 DISP3Q9P2K9 1392 aa29.79■■■□□ 2.36
PDLIM2-216ENST00000464275 ADGRF5Q8IZF2 1346 aa29.79■■■□□ 2.36
PDLIM2-216ENST00000464275 SUPT16HQ9Y5B9 1047 aaKnown RBP29.79■■■□□ 2.36
PDLIM2-216ENST00000464275 RPGRIP1LQ68CZ1 1315 aa29.78■■■□□ 2.36
PDLIM2-216ENST00000464275 CHGAP10645 457 aaKnown RBP29.77■■■□□ 2.36
PDLIM2-216ENST00000464275 CCDC184Q52MB2 194 aa29.77■■■□□ 2.36
PDLIM2-216ENST00000464275 EIF3AQ14152 1382 aaKnown RBP29.76■■■□□ 2.36
PDLIM2-216ENST00000464275 SETBP1Q9Y6X0 1596 aa29.76■■■□□ 2.35
PDLIM2-216ENST00000464275 MRS2Q9HD23 443 aa29.75■■■□□ 2.35
PDLIM2-216ENST00000464275 ARHGEF40Q8TER5 1519 aa29.74■■■□□ 2.35
PDLIM2-216ENST00000464275 KTN1Q86UP2 1357 aaKnown RBP29.74■■■□□ 2.35
PDLIM2-216ENST00000464275 CFAP70Q5T0N1 1121 aa29.72■■■□□ 2.35
PDLIM2-216ENST00000464275 MYO5BQ9ULV0 1848 aa29.72■■■□□ 2.35
PDLIM2-216ENST00000464275 PPP6R1Q9UPN7 881 aa29.72■■■□□ 2.35
PDLIM2-216ENST00000464275 MYO3AQ8NEV4 1616 aa29.7■■■□□ 2.35
PDLIM2-216ENST00000464275 CLTCQ00610 1675 aaKnown RBP29.69■■■□□ 2.34
PDLIM2-216ENST00000464275 PIK3C2GO75747 1445 aa29.69■■■□□ 2.34
PDLIM2-216ENST00000464275 NEXMIFQ5QGS0 1516 aa29.68■■■□□ 2.34
PDLIM2-216ENST00000464275 SLC52A1Q9NWF4 448 aa29.68■■■□□ 2.34
PDLIM2-216ENST00000464275 KDM5AP29375 1690 aaKnown RBP29.66■■■□□ 2.34
PDLIM2-216ENST00000464275 HNRNPUQ00839 825 aaKnown RBP eCLIP29.66■■■□□ 2.34
PDLIM2-216ENST00000464275 CDCA8Q53HL2 280 aa29.66■■■□□ 2.34
PDLIM2-216ENST00000464275 RALBP1Q15311 655 aa29.65■■■□□ 2.34
PDLIM2-216ENST00000464275 SLC24A1O60721 1099 aa29.64■■■□□ 2.34
PDLIM2-216ENST00000464275 TMEM131LA2VDJ0 1609 aa29.64■■■□□ 2.34
PDLIM2-216ENST00000464275 IDI1Q13907 227 aa29.62■■■□□ 2.33
PDLIM2-216ENST00000464275 C14orf93Q9H972 538 aaKnown RBP29.62■■■□□ 2.33
PDLIM2-216ENST00000464275 PER1O15534 1290 aaPredicted RBP29.61■■■□□ 2.33
PDLIM2-216ENST00000464275 FAM9BQ8IZU0 186 aa29.61■■■□□ 2.33
PDLIM2-216ENST00000464275 ERVK-7P63135 1459 aa29.61■■■□□ 2.33
PDLIM2-216ENST00000464275 CNGB1Q14028 1251 aaPredicted RBP29.61■■■□□ 2.33
PDLIM2-216ENST00000464275 MYOM1P52179 1685 aa29.6■■■□□ 2.33
PDLIM2-216ENST00000464275 ADGRB1O14514 1584 aa29.59■■■□□ 2.33
PDLIM2-216ENST00000464275 MYBBP1AQ9BQG0 1328 aaKnown RBP29.58■■■□□ 2.33
PDLIM2-216ENST00000464275 VGFO15240 615 aaPredicted RBP29.58■■■□□ 2.33
PDLIM2-216ENST00000464275 ZFYVE9O95405 1425 aa29.57■■■□□ 2.32
PDLIM2-216ENST00000464275 PANK3Q9H999 370 aa29.57■■■□□ 2.32
PDLIM2-216ENST00000464275 PARD3Q8TEW0 1356 aa29.57■■■□□ 2.32
PDLIM2-216ENST00000464275 QRICH2Q9H0J4 1663 aa29.55■■■□□ 2.32
PDLIM2-216ENST00000464275 BRD4O60885 1362 aaPredicted RBP29.55■■■□□ 2.32
PDLIM2-216ENST00000464275 SBNO2Q9Y2G9 1366 aa29.54■■■□□ 2.32
PDLIM2-216ENST00000464275 SPATA31D1Q6ZQQ2 1576 aa29.54■■■□□ 2.32
PDLIM2-216ENST00000464275 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
PDLIM2-216ENST00000464275 FBXO31Q5XUX0 539 aaPredicted RBP29.5■■■□□ 2.31
PDLIM2-216ENST00000464275 TMC1Q8TDI8 760 aa29.5■■■□□ 2.31
PDLIM2-216ENST00000464275 MYT1Q01538 1121 aa29.49■■■□□ 2.31
PDLIM2-216ENST00000464275 ARHGEF28Q8N1W1 1705 aaKnown RBP29.49■■■□□ 2.31
PDLIM2-216ENST00000464275 CENPJQ9HC77 1338 aaPredicted RBP29.48■■■□□ 2.31
PDLIM2-216ENST00000464275 ZBED9Q6R2W3 1325 aa29.46■■■□□ 2.31
PDLIM2-216ENST00000464275 PNISRQ8TF01 805 aaKnown RBP29.46■■■□□ 2.31
PDLIM2-216ENST00000464275 MLECQ14165 292 aa29.44■■■□□ 2.3
PDLIM2-216ENST00000464275 NLRP13Q86W25 1043 aa29.44■■■□□ 2.3
PDLIM2-216ENST00000464275 NUTM2DQ5VT03 806 aaPredicted RBP29.43■■■□□ 2.3
PDLIM2-216ENST00000464275 TRAK1Q9UPV9 953 aa29.43■■■□□ 2.3
PDLIM2-216ENST00000464275 TMEM132EQ6IEE7 984 aa29.41■■■□□ 2.3
PDLIM2-216ENST00000464275 CC2D1BQ5T0F9 858 aaKnown RBP29.4■■■□□ 2.3
PDLIM2-216ENST00000464275 KNSTRNQ9Y448 316 aa29.4■■■□□ 2.3
PDLIM2-216ENST00000464275 ASXL1Q8IXJ9 1541 aa29.39■■■□□ 2.3
PDLIM2-216ENST00000464275 NEFLP07196 543 aa29.39■■■□□ 2.3
PDLIM2-216ENST00000464275 LRPPRCP42704 1394 aaKnown RBP29.39■■■□□ 2.3
PDLIM2-216ENST00000464275 ESF1Q9H501 851 aaKnown RBP29.38■■■□□ 2.29
PDLIM2-216ENST00000464275 STAG3Q9UJ98 1225 aa29.37■■■□□ 2.29
PDLIM2-216ENST00000464275 A2ML1A8K2U0 1454 aa29.35■■■□□ 2.29
PDLIM2-216ENST00000464275 NPC1L1Q9UHC9 1359 aa29.35■■■□□ 2.29
PDLIM2-216ENST00000464275 ZMYM3Q14202 1370 aa29.34■■■□□ 2.29
PDLIM2-216ENST00000464275 ALKQ9UM73 1620 aa29.32■■■□□ 2.28
PDLIM2-216ENST00000464275 AMER1Q5JTC6 1135 aaPredicted RBP29.32■■■□□ 2.28
PDLIM2-216ENST00000464275 FKBP8Q14318 412 aa29.28■■■□□ 2.28
PDLIM2-216ENST00000464275 PUS7Q96PZ0 661 aaKnown RBP29.27■■■□□ 2.28
PDLIM2-216ENST00000464275 RIMS2Q9UQ26 1411 aa29.26■■■□□ 2.27
PDLIM2-216ENST00000464275 SETD1AO15047 1707 aaKnown RBP29.26■■■□□ 2.27
PDLIM2-216ENST00000464275 TULP4Q9NRJ4 1543 aa29.24■■■□□ 2.27
PDLIM2-216ENST00000464275 INSRP06213 1382 aa29.24■■■□□ 2.27
PDLIM2-216ENST00000464275 YTHDC2Q9H6S0 1430 aaKnown RBP29.23■■■□□ 2.27
PDLIM2-216ENST00000464275 EVC2Q86UK5 1308 aa29.23■■■□□ 2.27
PDLIM2-216ENST00000464275 PTPRMP28827 1452 aa29.22■■■□□ 2.27
PDLIM2-216ENST00000464275 TNRQ92752 1358 aa29.21■■■□□ 2.27
PDLIM2-216ENST00000464275 PPP2R1AP30153 589 aa29.2■■■□□ 2.26
PDLIM2-216ENST00000464275 UBR1Q8IWV7 1749 aa29.2■■■□□ 2.26
PDLIM2-216ENST00000464275 USP32Q8NFA0 1604 aa29.2■■■□□ 2.26
PDLIM2-216ENST00000464275 CARD14Q9BXL6 1004 aa29.18■■■□□ 2.26
PDLIM2-216ENST00000464275 TSHZ2Q9NRE2 1034 aa29.18■■■□□ 2.26
PDLIM2-216ENST00000464275 STK26Q9P289 416 aa29.17■■■□□ 2.26
PDLIM2-216ENST00000464275 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.17■■■□□ 2.26
PDLIM2-216ENST00000464275 SMG6Q86US8 1419 aaKnown RBP29.16■■■□□ 2.26
PDLIM2-216ENST00000464275 NRXN3Q9Y4C0 1643 aa29.16■■■□□ 2.26
PDLIM2-216ENST00000464275 DLC1Q96QB1 1528 aa29.15■■■□□ 2.26
PDLIM2-216ENST00000464275 FER1L4A9Z1Z3 1794 aa29.15■■■□□ 2.26
PDLIM2-216ENST00000464275 SENP3Q9H4L4 574 aaPredicted RBP29.13■■■□□ 2.25
PDLIM2-216ENST00000464275 BLMP54132 1417 aaPredicted RBP29.13■■■□□ 2.25
PDLIM2-216ENST00000464275 C3P01024 1663 aa29.13■■■□□ 2.25
PDLIM2-216ENST00000464275 TRHP20396 242 aaPredicted RBP29.12■■■□□ 2.25
PDLIM2-216ENST00000464275 SLC12A5Q9H2X9 1139 aa29.12■■■□□ 2.25
PDLIM2-216ENST00000464275 HDGFP51858 240 aaKnown RBP29.11■■■□□ 2.25
PDLIM2-216ENST00000464275 NSD3Q9BZ95 1437 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms