RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 TUSC1Q2TAM9 212 aa8.41□□□□□ -1.06
HOXB3-203ENST00000464266 SPIRE2Q8WWL2 714 aa8.41□□□□□ -1.06
HOXB3-203ENST00000464266 USTQ9Y2C2 406 aa8.41□□□□□ -1.06
HOXB3-203ENST00000464266 E9PSI1 815 aa8.4□□□□□ -1.06
HOXB3-203ENST00000464266 SLC34A2O95436 690 aa8.4□□□□□ -1.06
HOXB3-203ENST00000464266 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
HOXB3-203ENST00000464266 SPTLC1O15269 473 aa8.39□□□□□ -1.07
HOXB3-203ENST00000464266 AP1G2O75843 785 aa8.39□□□□□ -1.07
HOXB3-203ENST00000464266 RFX1P22670 979 aa8.39□□□□□ -1.07
HOXB3-203ENST00000464266 RBM46Q8TBY0 533 aaKnown RBP8.39□□□□□ -1.07
HOXB3-203ENST00000464266 HDGFL1Q5TGJ6 251 aa8.38□□□□□ -1.07
HOXB3-203ENST00000464266 NUTM1Q86Y26 1132 aa8.38□□□□□ -1.07
HOXB3-203ENST00000464266 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
HOXB3-203ENST00000464266 ERCC6Q03468 1493 aa8.38□□□□□ -1.07
HOXB3-203ENST00000464266 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.37□□□□□ -1.07
HOXB3-203ENST00000464266 ATMINO43313 823 aaPredicted RBP8.37□□□□□ -1.07
HOXB3-203ENST00000464266 RSBN1LQ6PCB5 846 aaPredicted RBP8.37□□□□□ -1.07
HOXB3-203ENST00000464266 ZNF710Q8N1W2 664 aa8.37□□□□□ -1.07
HOXB3-203ENST00000464266 JPH4Q96JJ6 628 aa8.37□□□□□ -1.07
HOXB3-203ENST00000464266 TTC13Q8NBP0 860 aa8.36□□□□□ -1.07
HOXB3-203ENST00000464266 LOC105371045A0A1W2PR82 267 aa8.35□□□□□ -1.07
HOXB3-203ENST00000464266 USP17L8P0C7I0 530 aa8.35□□□□□ -1.07
HOXB3-203ENST00000464266 WASHC4Q2M389 1173 aa8.35□□□□□ -1.07
HOXB3-203ENST00000464266 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
HOXB3-203ENST00000464266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
HOXB3-203ENST00000464266 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
HOXB3-203ENST00000464266 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
HOXB3-203ENST00000464266 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
HOXB3-203ENST00000464266 LILRB3O75022 631 aa8.34□□□□□ -1.07
HOXB3-203ENST00000464266 IGSF3O75054 1194 aa8.34□□□□□ -1.07
HOXB3-203ENST00000464266 CD46P15529 392 aa8.34□□□□□ -1.07
HOXB3-203ENST00000464266 CLCN6P51797 869 aa8.34□□□□□ -1.07
HOXB3-203ENST00000464266 QPCTQ16769 361 aa8.34□□□□□ -1.07
HOXB3-203ENST00000464266 CCDC27Q2M243 656 aa8.34□□□□□ -1.07
HOXB3-203ENST00000464266 NUTM2DQ5VT03 806 aaPredicted RBP8.34□□□□□ -1.07
HOXB3-203ENST00000464266 ASTLQ6HA08 431 aaPredicted RBP8.34□□□□□ -1.07
HOXB3-203ENST00000464266 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
HOXB3-203ENST00000464266 NDUFB9Q9Y6M9 179 aa8.34□□□□□ -1.07
HOXB3-203ENST00000464266 GJA5P36382 358 aa8.33□□□□□ -1.08
HOXB3-203ENST00000464266 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
HOXB3-203ENST00000464266 CFAP70Q5T0N1 1121 aa8.33□□□□□ -1.08
HOXB3-203ENST00000464266 SULF1Q8IWU6 871 aa8.33□□□□□ -1.08
HOXB3-203ENST00000464266 SEC24BO95487 1268 aa8.32□□□□□ -1.08
HOXB3-203ENST00000464266 ADAMTS19Q8TE59 1207 aa8.32□□□□□ -1.08
HOXB3-203ENST00000464266 AMOTL2Q9Y2J4 779 aa8.32□□□□□ -1.08
HOXB3-203ENST00000464266 IVNS1ABPQ9Y6Y0 642 aa8.32□□□□□ -1.08
HOXB3-203ENST00000464266 PRSS12P56730 875 aa8.31□□□□□ -1.08
HOXB3-203ENST00000464266 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
HOXB3-203ENST00000464266 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
HOXB3-203ENST00000464266 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
HOXB3-203ENST00000464266 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
HOXB3-203ENST00000464266 DDX11L8A8MPP1 907 aa8.3□□□□□ -1.08
HOXB3-203ENST00000464266 NDUFV2P19404 249 aa8.3□□□□□ -1.08
HOXB3-203ENST00000464266 FOSBP53539 338 aa8.3□□□□□ -1.08
HOXB3-203ENST00000464266 SRPK2P78362 688 aaKnown RBP8.3□□□□□ -1.08
HOXB3-203ENST00000464266 C3orf67Q6ZVT6 689 aa8.3□□□□□ -1.08
HOXB3-203ENST00000464266 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
HOXB3-203ENST00000464266 CDCA7LQ96GN5 454 aa8.3□□□□□ -1.08
HOXB3-203ENST00000464266 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
HOXB3-203ENST00000464266 CARNS1A5YM72 827 aa8.29□□□□□ -1.08
HOXB3-203ENST00000464266 PRPF38BQ5VTL8 546 aaKnown RBP8.29□□□□□ -1.08
HOXB3-203ENST00000464266 SND1Q7KZF4 910 aaKnown RBP eCLIP8.29□□□□□ -1.08
HOXB3-203ENST00000464266 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
HOXB3-203ENST00000464266 THOC2Q8NI27 1593 aaKnown RBP8.28□□□□□ -1.08
HOXB3-203ENST00000464266 CABLES1Q8TDN4 633 aa8.28□□□□□ -1.08
HOXB3-203ENST00000464266 VRTNQ9H8Y1 702 aa8.28□□□□□ -1.08
HOXB3-203ENST00000464266 PALM3A6NDB9 673 aaPredicted RBP8.27□□□□□ -1.09
HOXB3-203ENST00000464266 LMOD1P29536 600 aaPredicted RBP8.27□□□□□ -1.09
HOXB3-203ENST00000464266 ZNF454Q8N9F8 522 aa8.27□□□□□ -1.09
HOXB3-203ENST00000464266 ZBTB3Q9H5J0 574 aa8.27□□□□□ -1.09
HOXB3-203ENST00000464266 VAC14Q08AM6 782 aa8.26□□□□□ -1.09
HOXB3-203ENST00000464266 COLQQ9Y215 455 aaPredicted RBP8.26□□□□□ -1.09
HOXB3-203ENST00000464266 EYA1Q99502 592 aa8.25□□□□□ -1.09
HOXB3-203ENST00000464266 DNAJB2P25686 324 aa8.24□□□□□ -1.09
HOXB3-203ENST00000464266 ALG2Q9H553 416 aa8.24□□□□□ -1.09
HOXB3-203ENST00000464266 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
HOXB3-203ENST00000464266 SCRIBQ14160 1630 aa8.23□□□□□ -1.09
HOXB3-203ENST00000464266 KDM4FA0A1W2PPD8 638 aa8.23□□□□□ -1.09
HOXB3-203ENST00000464266 KDM4AO75164 1064 aa8.23□□□□□ -1.09
HOXB3-203ENST00000464266 ATG7O95352 703 aa8.23□□□□□ -1.09
HOXB3-203ENST00000464266 RDH13Q8NBN7 331 aa8.23□□□□□ -1.09
HOXB3-203ENST00000464266 ADAM33Q9BZ11 813 aa8.23□□□□□ -1.09
HOXB3-203ENST00000464266 HMX1Q9NP08 348 aaPredicted RBP8.23□□□□□ -1.09
HOXB3-203ENST00000464266 CTDSPL2Q05D32 466 aa8.22□□□□□ -1.09
HOXB3-203ENST00000464266 CDCA8Q53HL2 280 aa8.22□□□□□ -1.09
HOXB3-203ENST00000464266 B4GALNT3Q6L9W6 998 aa8.22□□□□□ -1.09
HOXB3-203ENST00000464266 TRIM34Q9BYJ4 488 aa8.22□□□□□ -1.09
HOXB3-203ENST00000464266 TMEM88BA6NKF7 163 aa8.21□□□□□ -1.1
HOXB3-203ENST00000464266 FDX1P10109 184 aa8.21□□□□□ -1.1
HOXB3-203ENST00000464266 SOX11P35716 441 aa8.21□□□□□ -1.1
HOXB3-203ENST00000464266 USP46P62068 366 aa8.21□□□□□ -1.1
HOXB3-203ENST00000464266 HELBQ8NG08 1087 aaPredicted RBP8.21□□□□□ -1.1
HOXB3-203ENST00000464266 FAM198AQ9UFP1 575 aa8.21□□□□□ -1.1
HOXB3-203ENST00000464266 GPR37L1O60883 481 aa8.2□□□□□ -1.1
HOXB3-203ENST00000464266 NUDT18Q6ZVK8 323 aa8.2□□□□□ -1.1
HOXB3-203ENST00000464266 TSC1Q92574 1164 aa8.2□□□□□ -1.1
HOXB3-203ENST00000464266 UCN2Q96RP3 112 aa8.2□□□□□ -1.1
HOXB3-203ENST00000464266 TMEM134Q9H6X4 195 aa8.2□□□□□ -1.1
HOXB3-203ENST00000464266 NBPF26B4DH59 902 aa8.19□□□□□ -1.1
HOXB3-203ENST00000464266 SEMA3FQ13275 785 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms