RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ADGRF5Q8IZF2 1346 aa20.27■□□□□ 0.84
COL5A1-205ENST00000464187 STAG3Q9UJ98 1225 aa20.27■□□□□ 0.84
COL5A1-205ENST00000464187 FER1L4A9Z1Z3 1794 aa20.26■□□□□ 0.83
COL5A1-205ENST00000464187 TNRQ92752 1358 aa20.26■□□□□ 0.83
COL5A1-205ENST00000464187 TMEM131LA2VDJ0 1609 aa20.25■□□□□ 0.83
COL5A1-205ENST00000464187 USP47Q96K76 1375 aa20.25■□□□□ 0.83
COL5A1-205ENST00000464187 IFT172Q9UG01 1749 aa20.24■□□□□ 0.83
COL5A1-205ENST00000464187 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
COL5A1-205ENST00000464187 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
COL5A1-205ENST00000464187 NRXN1Q9ULB1 1477 aa20.23■□□□□ 0.83
COL5A1-205ENST00000464187 ANP32CO43423 234 aa20.23■□□□□ 0.83
COL5A1-205ENST00000464187 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
COL5A1-205ENST00000464187 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
COL5A1-205ENST00000464187 CCER2I3L3R5 266 aa20.21■□□□□ 0.83
COL5A1-205ENST00000464187 VGFO15240 615 aaPredicted RBP20.21■□□□□ 0.83
COL5A1-205ENST00000464187 NUTM2DQ5VT03 806 aaPredicted RBP20.21■□□□□ 0.83
COL5A1-205ENST00000464187 PPLO60437 1756 aa20.21■□□□□ 0.83
COL5A1-205ENST00000464187 C3P01024 1663 aa20.21■□□□□ 0.83
COL5A1-205ENST00000464187 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
COL5A1-205ENST00000464187 CFAP70Q5T0N1 1121 aa20.19■□□□□ 0.82
COL5A1-205ENST00000464187 PIK3C2GO75747 1445 aa20.18■□□□□ 0.82
COL5A1-205ENST00000464187 MYO5BQ9ULV0 1848 aa20.18■□□□□ 0.82
COL5A1-205ENST00000464187 ADAMTSL3P82987 1691 aa20.17■□□□□ 0.82
COL5A1-205ENST00000464187 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
COL5A1-205ENST00000464187 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
COL5A1-205ENST00000464187 LAMC1P11047 1609 aa20.16■□□□□ 0.82
COL5A1-205ENST00000464187 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
COL5A1-205ENST00000464187 RIMS1Q86UR5 1692 aaKnown RBP20.15■□□□□ 0.82
COL5A1-205ENST00000464187 CCDC7Q96M83 1385 aa20.15■□□□□ 0.82
COL5A1-205ENST00000464187 C14orf93Q9H972 538 aaKnown RBP20.14■□□□□ 0.81
COL5A1-205ENST00000464187 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.81
COL5A1-205ENST00000464187 RIMS2Q9UQ26 1411 aa20.12■□□□□ 0.81
COL5A1-205ENST00000464187 C11orf95C9JLR9 678 aaPredicted RBP20.12■□□□□ 0.81
COL5A1-205ENST00000464187 SCAF11Q99590 1463 aaKnown RBP20.1■□□□□ 0.81
COL5A1-205ENST00000464187 KDM5AP29375 1690 aaKnown RBP20.09■□□□□ 0.81
COL5A1-205ENST00000464187 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL5A1-205ENST00000464187 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
COL5A1-205ENST00000464187 TMEM2Q9UHN6 1383 aa20.08■□□□□ 0.81
COL5A1-205ENST00000464187 UBR1Q8IWV7 1749 aa20.08■□□□□ 0.81
COL5A1-205ENST00000464187 HDGFP51858 240 aaKnown RBP20.07■□□□□ 0.8
COL5A1-205ENST00000464187 SETBP1Q9Y6X0 1596 aa20.07■□□□□ 0.8
COL5A1-205ENST00000464187 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
COL5A1-205ENST00000464187 KIF7Q2M1P5 1343 aa20.06■□□□□ 0.8
COL5A1-205ENST00000464187 ADGRB1O14514 1584 aa20.05■□□□□ 0.8
COL5A1-205ENST00000464187 TESK2Q96S53 571 aa20.04■□□□□ 0.8
COL5A1-205ENST00000464187 EIF3AQ14152 1382 aaKnown RBP20.04■□□□□ 0.8
COL5A1-205ENST00000464187 IQGAP1P46940 1657 aa20.04■□□□□ 0.8
COL5A1-205ENST00000464187 MYO3AQ8NEV4 1616 aa20.04■□□□□ 0.8
COL5A1-205ENST00000464187 PTPRMP28827 1452 aa20.03■□□□□ 0.8
COL5A1-205ENST00000464187 THEMISQ8N1K5 641 aaPredicted RBP20.03■□□□□ 0.8
COL5A1-205ENST00000464187 TRAK1Q9UPV9 953 aa20.01■□□□□ 0.79
COL5A1-205ENST00000464187 LTKP29376 864 aa20■□□□□ 0.79
COL5A1-205ENST00000464187 ALKQ9UM73 1620 aa20■□□□□ 0.79
COL5A1-205ENST00000464187 CEP170BQ9Y4F5 1589 aaPredicted RBP19.99■□□□□ 0.79
COL5A1-205ENST00000464187 TXNDC2Q86VQ3 553 aa19.99■□□□□ 0.79
COL5A1-205ENST00000464187 POLR3GLQ9BT43 218 aa19.99■□□□□ 0.79
COL5A1-205ENST00000464187 EID1Q9Y6B2 187 aa19.99■□□□□ 0.79
COL5A1-205ENST00000464187 ARHGAP23Q9P227 1491 aa19.98■□□□□ 0.79
COL5A1-205ENST00000464187 SLIT1O75093 1534 aa19.98■□□□□ 0.79
COL5A1-205ENST00000464187 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
COL5A1-205ENST00000464187 TMF1P82094 1093 aa19.97■□□□□ 0.79
COL5A1-205ENST00000464187 BCANQ96GW7 911 aa19.96■□□□□ 0.79
COL5A1-205ENST00000464187 DISP3Q9P2K9 1392 aa19.96■□□□□ 0.79
COL5A1-205ENST00000464187 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.78
COL5A1-205ENST00000464187 CENPJQ9HC77 1338 aaPredicted RBP19.95■□□□□ 0.78
COL5A1-205ENST00000464187 STK26Q9P289 416 aa19.95■□□□□ 0.78
COL5A1-205ENST00000464187 SETD1BQ9UPS6 1966 aaKnown RBP19.94■□□□□ 0.78
COL5A1-205ENST00000464187 NRXN3Q9Y4C0 1643 aa19.94■□□□□ 0.78
COL5A1-205ENST00000464187 YTHDC2Q9H6S0 1430 aaKnown RBP19.93■□□□□ 0.78
COL5A1-205ENST00000464187 PRKRIP1Q9H875 184 aaPredicted RBP19.93■□□□□ 0.78
COL5A1-205ENST00000464187 SUPT16HQ9Y5B9 1047 aaKnown RBP19.93■□□□□ 0.78
COL5A1-205ENST00000464187 ZNF142P52746 1687 aaPredicted RBP19.92■□□□□ 0.78
COL5A1-205ENST00000464187 SLC24A1O60721 1099 aa19.91■□□□□ 0.78
COL5A1-205ENST00000464187 SBNO2Q9Y2G9 1366 aa19.91■□□□□ 0.78
COL5A1-205ENST00000464187 ADAMTS13Q76LX8 1427 aa19.9■□□□□ 0.78
COL5A1-205ENST00000464187 METP08581 1390 aa19.9■□□□□ 0.78
COL5A1-205ENST00000464187 KDM4FA0A1W2PPD8 638 aa19.9■□□□□ 0.78
COL5A1-205ENST00000464187 SETD1AO15047 1707 aaKnown RBP19.9■□□□□ 0.78
COL5A1-205ENST00000464187 CDCA8Q53HL2 280 aa19.88■□□□□ 0.77
COL5A1-205ENST00000464187 LRPPRCP42704 1394 aaKnown RBP19.88■□□□□ 0.77
COL5A1-205ENST00000464187 ARHGEF28Q8N1W1 1705 aaKnown RBP19.87■□□□□ 0.77
COL5A1-205ENST00000464187 CCDC184Q52MB2 194 aa19.87■□□□□ 0.77
COL5A1-205ENST00000464187 ANKLE2Q86XL3 938 aa19.87■□□□□ 0.77
COL5A1-205ENST00000464187 SLC26A8Q96RN1 970 aa19.87■□□□□ 0.77
COL5A1-205ENST00000464187 PRAM1Q96QH2 718 aa19.86■□□□□ 0.77
COL5A1-205ENST00000464187 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
COL5A1-205ENST00000464187 MED14O60244 1454 aa19.85■□□□□ 0.77
COL5A1-205ENST00000464187 SAFB2Q14151 953 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL5A1-205ENST00000464187 POGKQ9P215 609 aa19.84■□□□□ 0.77
COL5A1-205ENST00000464187 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
COL5A1-205ENST00000464187 TBX22Q9Y458 520 aa19.83■□□□□ 0.76
COL5A1-205ENST00000464187 DLC1Q96QB1 1528 aa19.82■□□□□ 0.76
COL5A1-205ENST00000464187 HNRNPUQ00839 825 aaKnown RBP eCLIP19.81■□□□□ 0.76
COL5A1-205ENST00000464187 WAPLQ7Z5K2 1190 aa19.8■□□□□ 0.76
COL5A1-205ENST00000464187 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
COL5A1-205ENST00000464187 TECPR2O15040 1411 aa19.8■□□□□ 0.76
COL5A1-205ENST00000464187 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
COL5A1-205ENST00000464187 EVC2Q86UK5 1308 aa19.78■□□□□ 0.76
COL5A1-205ENST00000464187 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
COL5A1-205ENST00000464187 PLEKHH1Q9ULM0 1364 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms