RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 MLH3Q9UHC1 1453 aa27.38■■□□□ 1.97
TUBGCP3-204ENST00000464139 MAP3K4Q9Y6R4 1608 aa27.38■■□□□ 1.97
TUBGCP3-204ENST00000464139 RBM19Q9Y4C8 960 aaKnown RBP27.38■■□□□ 1.97
TUBGCP3-204ENST00000464139 CFAP65Q6ZU64 1925 aaKnown RBP27.37■■□□□ 1.97
TUBGCP3-204ENST00000464139 MROH2AA6NES4 1674 aa27.37■■□□□ 1.97
TUBGCP3-204ENST00000464139 KIAA1210Q9ULL0 1709 aa27.37■■□□□ 1.97
TUBGCP3-204ENST00000464139 CHGAP10645 457 aaKnown RBP27.36■■□□□ 1.97
TUBGCP3-204ENST00000464139 HECW2Q9P2P5 1572 aa27.36■■□□□ 1.97
TUBGCP3-204ENST00000464139 RAPGEF3O95398 923 aa27.36■■□□□ 1.97
TUBGCP3-204ENST00000464139 MYOM2P54296 1465 aa27.35■■□□□ 1.97
TUBGCP3-204ENST00000464139 CDCA8Q53HL2 280 aa27.35■■□□□ 1.97
TUBGCP3-204ENST00000464139 ABCA6Q8N139 1617 aa27.35■■□□□ 1.97
TUBGCP3-204ENST00000464139 KNSTRNQ9Y448 316 aa27.35■■□□□ 1.97
TUBGCP3-204ENST00000464139 EIF3AQ14152 1382 aaKnown RBP27.35■■□□□ 1.97
TUBGCP3-204ENST00000464139 RNF123Q5XPI4 1314 aa27.34■■□□□ 1.97
TUBGCP3-204ENST00000464139 NPATQ14207 1427 aa27.32■■□□□ 1.96
TUBGCP3-204ENST00000464139 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
TUBGCP3-204ENST00000464139 IFT172Q9UG01 1749 aa27.31■■□□□ 1.96
TUBGCP3-204ENST00000464139 SYNMO15061 1565 aa27.29■■□□□ 1.96
TUBGCP3-204ENST00000464139 AMER1Q5JTC6 1135 aaPredicted RBP27.29■■□□□ 1.96
TUBGCP3-204ENST00000464139 NOS1P29475 1434 aa27.29■■□□□ 1.96
TUBGCP3-204ENST00000464139 ADGRB3O60242 1522 aa27.27■■□□□ 1.96
TUBGCP3-204ENST00000464139 NEO1Q92859 1461 aa27.26■■□□□ 1.95
TUBGCP3-204ENST00000464139 MYOM1P52179 1685 aa27.26■■□□□ 1.95
TUBGCP3-204ENST00000464139 PPP2R1AP30153 589 aa27.25■■□□□ 1.95
TUBGCP3-204ENST00000464139 NRXN1Q9ULB1 1477 aa27.24■■□□□ 1.95
TUBGCP3-204ENST00000464139 KDM5AP29375 1690 aaKnown RBP27.23■■□□□ 1.95
TUBGCP3-204ENST00000464139 ABCC3O15438 1527 aa27.23■■□□□ 1.95
TUBGCP3-204ENST00000464139 ERVK-7P63135 1459 aa27.22■■□□□ 1.95
TUBGCP3-204ENST00000464139 BLMP54132 1417 aaPredicted RBP27.22■■□□□ 1.95
TUBGCP3-204ENST00000464139 CDCA7LQ96GN5 454 aa27.22■■□□□ 1.95
TUBGCP3-204ENST00000464139 ASXL1Q8IXJ9 1541 aa27.21■■□□□ 1.95
TUBGCP3-204ENST00000464139 ADAMTS8Q9UP79 889 aa27.2■■□□□ 1.94
TUBGCP3-204ENST00000464139 PDE3BQ13370 1112 aa27.19■■□□□ 1.94
TUBGCP3-204ENST00000464139 DIP2CQ9Y2E4 1556 aa27.17■■□□□ 1.94
TUBGCP3-204ENST00000464139 INSRP06213 1382 aa27.17■■□□□ 1.94
TUBGCP3-204ENST00000464139 PPLO60437 1756 aa27.17■■□□□ 1.94
TUBGCP3-204ENST00000464139 RCAN3Q9UKA8 241 aa27.16■■□□□ 1.94
TUBGCP3-204ENST00000464139 TRAK1Q9UPV9 953 aa27.16■■□□□ 1.94
TUBGCP3-204ENST00000464139 SLC24A1O60721 1099 aa27.16■■□□□ 1.94
TUBGCP3-204ENST00000464139 CAMSAP1Q5T5Y3 1602 aa27.16■■□□□ 1.94
TUBGCP3-204ENST00000464139 ZMYM4Q5VZL5 1548 aa27.15■■□□□ 1.94
TUBGCP3-204ENST00000464139 SIGLEC1Q9BZZ2 1709 aa27.15■■□□□ 1.94
TUBGCP3-204ENST00000464139 PIK3C2GO75747 1445 aa27.14■■□□□ 1.94
TUBGCP3-204ENST00000464139 TMEM132EQ6IEE7 984 aa27.14■■□□□ 1.94
TUBGCP3-204ENST00000464139 C14orf93Q9H972 538 aaKnown RBP27.14■■□□□ 1.94
TUBGCP3-204ENST00000464139 RRP1P56182 461 aaKnown RBP27.14■■□□□ 1.93
TUBGCP3-204ENST00000464139 NUTM2DQ5VT03 806 aaPredicted RBP27.14■■□□□ 1.93
TUBGCP3-204ENST00000464139 CENPJQ9HC77 1338 aaPredicted RBP27.14■■□□□ 1.93
TUBGCP3-204ENST00000464139 CCDC136Q96JN2 1154 aa27.13■■□□□ 1.93
TUBGCP3-204ENST00000464139 RICTORQ6R327 1708 aa27.13■■□□□ 1.93
TUBGCP3-204ENST00000464139 WDR43Q15061 677 aaKnown RBP eCLIP27.12■■□□□ 1.93
TUBGCP3-204ENST00000464139 YEATS2Q9ULM3 1422 aa27.12■■□□□ 1.93
TUBGCP3-204ENST00000464139 CARD14Q9BXL6 1004 aa27.12■■□□□ 1.93
TUBGCP3-204ENST00000464139 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
TUBGCP3-204ENST00000464139 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
TUBGCP3-204ENST00000464139 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
TUBGCP3-204ENST00000464139 SETBP1Q9Y6X0 1596 aa27.12■■□□□ 1.93
TUBGCP3-204ENST00000464139 MYO3AQ8NEV4 1616 aa27.11■■□□□ 1.93
TUBGCP3-204ENST00000464139 NPC1L1Q9UHC9 1359 aa27.11■■□□□ 1.93
TUBGCP3-204ENST00000464139 RPGRIP1LQ68CZ1 1315 aa27.1■■□□□ 1.93
TUBGCP3-204ENST00000464139 SBNO2Q9Y2G9 1366 aa27.08■■□□□ 1.93
TUBGCP3-204ENST00000464139 ADGRB1O14514 1584 aa27.07■■□□□ 1.92
TUBGCP3-204ENST00000464139 PIK3C2BO00750 1634 aa27.04■■□□□ 1.92
TUBGCP3-204ENST00000464139 IDI1Q13907 227 aa27.04■■□□□ 1.92
TUBGCP3-204ENST00000464139 EXOC6Q8TAG9 804 aa27.03■■□□□ 1.92
TUBGCP3-204ENST00000464139 QRICH2Q9H0J4 1663 aa27.02■■□□□ 1.92
TUBGCP3-204ENST00000464139 PLEKHH1Q9ULM0 1364 aa27.01■■□□□ 1.91
TUBGCP3-204ENST00000464139 SENP3Q9H4L4 574 aaPredicted RBP27.01■■□□□ 1.91
TUBGCP3-204ENST00000464139 VGFO15240 615 aaPredicted RBP27■■□□□ 1.91
TUBGCP3-204ENST00000464139 ARHGAP31Q2M1Z3 1444 aa27■■□□□ 1.91
TUBGCP3-204ENST00000464139 FAM69CQ0P6D2 419 aa27■■□□□ 1.91
TUBGCP3-204ENST00000464139 SLC12A5Q9H2X9 1139 aa26.99■■□□□ 1.91
TUBGCP3-204ENST00000464139 ZC3H13Q5T200 1668 aaKnown RBP26.99■■□□□ 1.91
TUBGCP3-204ENST00000464139 NEXMIFQ5QGS0 1516 aa26.99■■□□□ 1.91
TUBGCP3-204ENST00000464139 CCDC146Q8IYE0 955 aa26.98■■□□□ 1.91
TUBGCP3-204ENST00000464139 GLI2P10070 1586 aa26.98■■□□□ 1.91
TUBGCP3-204ENST00000464139 PLIN1O60240 522 aa26.97■■□□□ 1.91
TUBGCP3-204ENST00000464139 NSD3Q9BZ95 1437 aa26.95■■□□□ 1.9
TUBGCP3-204ENST00000464139 SLC52A1Q9NWF4 448 aa26.93■■□□□ 1.9
TUBGCP3-204ENST00000464139 FANCIQ9NVI1 1328 aa26.92■■□□□ 1.9
TUBGCP3-204ENST00000464139 ZNF521Q96K83 1311 aa26.92■■□□□ 1.9
TUBGCP3-204ENST00000464139 MSH5O43196 834 aa26.91■■□□□ 1.9
TUBGCP3-204ENST00000464139 MYO5BQ9ULV0 1848 aa26.9■■□□□ 1.9
TUBGCP3-204ENST00000464139 DUSP27Q5VZP5 1158 aa26.9■■□□□ 1.9
TUBGCP3-204ENST00000464139 FBXO31Q5XUX0 539 aaPredicted RBP26.9■■□□□ 1.9
TUBGCP3-204ENST00000464139 ANP32EQ9BTT0 268 aa26.9■■□□□ 1.9
TUBGCP3-204ENST00000464139 TSPOAP1O95153 1857 aa26.9■■□□□ 1.9
TUBGCP3-204ENST00000464139 TNNT2P45379 298 aaPredicted RBP26.9■■□□□ 1.9
TUBGCP3-204ENST00000464139 SAFB2Q14151 953 aaKnown RBP eCLIP26.9■■□□□ 1.9
TUBGCP3-204ENST00000464139 GOLGA2Q08379 1002 aa26.89■■□□□ 1.9
TUBGCP3-204ENST00000464139 APAF1O14727 1248 aa26.89■■□□□ 1.89
TUBGCP3-204ENST00000464139 PREX1Q8TCU6 1659 aa26.88■■□□□ 1.89
TUBGCP3-204ENST00000464139 ARHGEF28Q8N1W1 1705 aaKnown RBP26.88■■□□□ 1.89
TUBGCP3-204ENST00000464139 MORC1Q86VD1 984 aa26.88■■□□□ 1.89
TUBGCP3-204ENST00000464139 STK26Q9P289 416 aa26.88■■□□□ 1.89
TUBGCP3-204ENST00000464139 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
TUBGCP3-204ENST00000464139 EVC2Q86UK5 1308 aa26.86■■□□□ 1.89
TUBGCP3-204ENST00000464139 TULP4Q9NRJ4 1543 aa26.85■■□□□ 1.89
TUBGCP3-204ENST00000464139 MYT1Q01538 1121 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms