RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.97
CDKL5-203ENST00000463994 PATL2C9JE40 543 aaKnown RBP8.96□□□□□ -0.98
CDKL5-203ENST00000463994 TRAK2O60296 914 aa8.96□□□□□ -0.98
CDKL5-203ENST00000463994 MYCNP04198 464 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-203ENST00000463994 CERS3Q8IU89 383 aa8.96□□□□□ -0.98
CDKL5-203ENST00000463994 GEMIN8Q9NWZ8 242 aaKnown RBP8.96□□□□□ -0.98
CDKL5-203ENST00000463994 C8orf34Q49A92 452 aa8.95□□□□□ -0.98
CDKL5-203ENST00000463994 GRIPAP1Q4V328 841 aa8.95□□□□□ -0.98
CDKL5-203ENST00000463994 AEBP1Q8IUX7 1158 aa8.95□□□□□ -0.98
CDKL5-203ENST00000463994 KCNJ4P48050 445 aa8.95□□□□□ -0.98
CDKL5-203ENST00000463994 SASS6Q6UVJ0 657 aa8.95□□□□□ -0.98
CDKL5-203ENST00000463994 PPP1R9BQ96SB3 815 aa8.95□□□□□ -0.98
CDKL5-203ENST00000463994 SLKQ9H2G2 1235 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-203ENST00000463994 ZNF500O60304 480 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-203ENST00000463994 ANTXR1Q9H6X2 564 aa8.94□□□□□ -0.98
CDKL5-203ENST00000463994 CNTLNQ9NXG0 1405 aa8.94□□□□□ -0.98
CDKL5-203ENST00000463994 SOX12O15370 315 aa8.94□□□□□ -0.98
CDKL5-203ENST00000463994 RALBP1Q15311 655 aa8.94□□□□□ -0.98
CDKL5-203ENST00000463994 HS1BP3Q53T59 392 aa8.94□□□□□ -0.98
CDKL5-203ENST00000463994 PRG4Q92954 1404 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-203ENST00000463994 BRPF1P55201 1214 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-203ENST00000463994 ARID3CA6NKF2 412 aa8.93□□□□□ -0.98
CDKL5-203ENST00000463994 CC2D1BQ5T0F9 858 aaKnown RBP8.93□□□□□ -0.98
CDKL5-203ENST00000463994 TSPYL1Q9H0U9 437 aa8.93□□□□□ -0.98
CDKL5-203ENST00000463994 KTN1Q86UP2 1357 aaKnown RBP8.93□□□□□ -0.98
CDKL5-203ENST00000463994 UHRF1BP1LA0JNW5 1464 aa8.93□□□□□ -0.98
CDKL5-203ENST00000463994 ZNF771Q7L3S4 317 aaPredicted RBP8.92□□□□□ -0.98
CDKL5-203ENST00000463994 ERCC6L2Q5T890 1561 aa8.92□□□□□ -0.98
CDKL5-203ENST00000463994 CCDC66A2RUB6 948 aa8.92□□□□□ -0.98
CDKL5-203ENST00000463994 NBPF1Q3BBV0 1214 aa8.92□□□□□ -0.98
CDKL5-203ENST00000463994 NGEFQ8N5V2 710 aa8.92□□□□□ -0.98
CDKL5-203ENST00000463994 KIF13AQ9H1H9 1805 aa8.91□□□□□ -0.98
CDKL5-203ENST00000463994 GLI2P10070 1586 aa8.91□□□□□ -0.98
CDKL5-203ENST00000463994 NCOA2Q15596 1464 aa8.91□□□□□ -0.98
CDKL5-203ENST00000463994 ABCC10Q5T3U5 1492 aa8.91□□□□□ -0.98
CDKL5-203ENST00000463994 CARMIL2Q6F5E8 1435 aa8.9□□□□□ -0.98
CDKL5-203ENST00000463994 IGF1RP08069 1367 aa8.9□□□□□ -0.98
CDKL5-203ENST00000463994 PHF14O94880 888 aa8.9□□□□□ -0.98
CDKL5-203ENST00000463994 DDX11L8A8MPP1 907 aa8.9□□□□□ -0.98
CDKL5-203ENST00000463994 TIGD1Q96MW7 591 aa8.9□□□□□ -0.98
CDKL5-203ENST00000463994 DIP2BQ9P265 1576 aa8.89□□□□□ -0.99
CDKL5-203ENST00000463994 TICAM2Q86XR7 235 aa8.89□□□□□ -0.99
CDKL5-203ENST00000463994 P3H3Q8IVL6 736 aa8.89□□□□□ -0.99
CDKL5-203ENST00000463994 NOL7Q9UMY1 257 aaKnown RBP8.89□□□□□ -0.99
CDKL5-203ENST00000463994 IQGAP2Q13576 1575 aa8.89□□□□□ -0.99
CDKL5-203ENST00000463994 RCAN3Q9UKA8 241 aa8.89□□□□□ -0.99
CDKL5-203ENST00000463994 KIF3AQ9Y496 699 aa8.89□□□□□ -0.99
CDKL5-203ENST00000463994 ADCY10Q96PN6 1610 aa8.89□□□□□ -0.99
CDKL5-203ENST00000463994 UGGT2Q9NYU1 1516 aa8.89□□□□□ -0.99
CDKL5-203ENST00000463994 FYCO1Q9BQS8 1478 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 MCCP23508 829 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 ATP2B3Q16720 1220 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 SKAP1Q86WV1 359 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 TONSLQ96HA7 1378 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 TRIM6-TRIM34B2RNG4 842 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 MCM5P33992 734 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 TRIM34Q9BYJ4 488 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 EFCC1Q9HA90 598 aa8.88□□□□□ -0.99
CDKL5-203ENST00000463994 PCF11O94913 1555 aaKnown RBP8.88□□□□□ -0.99
CDKL5-203ENST00000463994 TMED8Q6PL24 325 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-203ENST00000463994 CENPQQ7L2Z9 268 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-203ENST00000463994 MYRIPQ8NFW9 859 aa8.87□□□□□ -0.99
CDKL5-203ENST00000463994 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-203ENST00000463994 EFCAB5A4FU69 1503 aa8.87□□□□□ -0.99
CDKL5-203ENST00000463994 CARMIL1Q5VZK9 1371 aa8.87□□□□□ -0.99
CDKL5-203ENST00000463994 ZBTB7CA1YPR0 619 aa8.87□□□□□ -0.99
CDKL5-203ENST00000463994 TULP2O00295 520 aa8.87□□□□□ -0.99
CDKL5-203ENST00000463994 XPCQ01831 940 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-203ENST00000463994 CARD10Q9BWT7 1032 aa8.87□□□□□ -0.99
CDKL5-203ENST00000463994 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
CDKL5-203ENST00000463994 PLB1Q6P1J6 1458 aa8.86□□□□□ -0.99
CDKL5-203ENST00000463994 GABPB1Q06547 395 aaPredicted RBP8.86□□□□□ -0.99
CDKL5-203ENST00000463994 FAM50AQ14320 339 aaKnown RBP8.86□□□□□ -0.99
CDKL5-203ENST00000463994 CHMP4CQ96CF2 233 aa8.86□□□□□ -0.99
CDKL5-203ENST00000463994 KDM2BQ8NHM5 1336 aa8.86□□□□□ -0.99
CDKL5-203ENST00000463994 NINLQ9Y2I6 1382 aa8.85□□□□□ -0.99
CDKL5-203ENST00000463994 GAS2L3Q86XJ1 694 aa8.85□□□□□ -0.99
CDKL5-203ENST00000463994 CHMP5Q9NZZ3 219 aa8.85□□□□□ -0.99
CDKL5-203ENST00000463994 CASKIN1Q8WXD9 1431 aa8.85□□□□□ -0.99
CDKL5-203ENST00000463994 SKOR2Q2VWA4 1001 aaPredicted RBP8.85□□□□□ -0.99
CDKL5-203ENST00000463994 CEP120Q8N960 986 aa8.85□□□□□ -0.99
CDKL5-203ENST00000463994 CALCOCO1Q9P1Z2 691 aa8.85□□□□□ -0.99
CDKL5-203ENST00000463994 UACAQ9BZF9 1416 aa8.85□□□□□ -0.99
CDKL5-203ENST00000463994 HMGN5P82970 282 aaKnown RBP8.84□□□□□ -0.99
CDKL5-203ENST00000463994 ZNF710Q8N1W2 664 aa8.84□□□□□ -0.99
CDKL5-203ENST00000463994 PUS7Q96PZ0 661 aaKnown RBP8.84□□□□□ -0.99
CDKL5-203ENST00000463994 ABCC2Q92887 1545 aa8.84□□□□□ -0.99
CDKL5-203ENST00000463994 USP19O94966 1318 aa8.84□□□□□ -0.99
CDKL5-203ENST00000463994 FOXD4L5Q5VV16 416 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-203ENST00000463994 FOXD4L4Q8WXT5 416 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-203ENST00000463994 PRIMPOLQ96LW4 560 aa8.84□□□□□ -0.99
CDKL5-203ENST00000463994 HFM1A2PYH4 1435 aa8.84□□□□□ -1
CDKL5-203ENST00000463994 CAPN2P17655 700 aa8.84□□□□□ -1
CDKL5-203ENST00000463994 GTF2F1P35269 517 aaKnown RBP eCLIP8.84□□□□□ -1
CDKL5-203ENST00000463994 LMOD3Q0VAK6 560 aa8.84□□□□□ -1
CDKL5-203ENST00000463994 FEZ1Q99689 392 aa8.84□□□□□ -1
CDKL5-203ENST00000463994 PLCD4Q9BRC7 762 aa8.84□□□□□ -1
CDKL5-203ENST00000463994 ZKSCAN5Q9Y2L8 839 aa8.84□□□□□ -1
CDKL5-203ENST00000463994 CTTNBP2Q8WZ74 1663 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms