RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 TSR3Q9UJK0 312 aaKnown RBP15.15■□□□□ 0.02
CCDC144A-211ENST00000463809 PHOX2BQ99453 314 aa15.14■□□□□ 0.01
CCDC144A-211ENST00000463809 SLF2Q8IX21 1173 aa15.1■□□□□ 0.01
CCDC144A-211ENST00000463809 CCDC102AQ96A19 550 aa15.1■□□□□ 0.01
CCDC144A-211ENST00000463809 RNF40O75150 1001 aa15.09■□□□□ 0.01
CCDC144A-211ENST00000463809 PPP4CP60510 307 aa15.09■□□□□ 0.01
CCDC144A-211ENST00000463809 NLRP7Q8WX94 980 aa15.09■□□□□ 0.01
CCDC144A-211ENST00000463809 NYAP1Q6ZVC0 841 aa15.07■□□□□ 0
CCDC144A-211ENST00000463809 KRI1Q8N9T8 703 aaKnown RBP15.07■□□□□ 0
CCDC144A-211ENST00000463809 SLC4A3P48751 1232 aa15.04■□□□□ -0
CCDC144A-211ENST00000463809 DAXXQ9UER7 740 aaPredicted RBP15.03■□□□□ -0
CCDC144A-211ENST00000463809 NECTIN2Q92692 538 aa15.01□□□□□ -0.01
CCDC144A-211ENST00000463809 SLC10A3P09131 477 aa15□□□□□ -0.01
CCDC144A-211ENST00000463809 APLP1P51693 650 aa14.98□□□□□ -0.01
CCDC144A-211ENST00000463809 MDM2Q00987 491 aaPredicted RBP14.95□□□□□ -0.02
CCDC144A-211ENST00000463809 PLA2G2EQ9NZK7 142 aa14.94□□□□□ -0.02
CCDC144A-211ENST00000463809 AK7Q96M32 723 aa14.93□□□□□ -0.02
CCDC144A-211ENST00000463809 DDX11L8A8MPP1 907 aa14.92□□□□□ -0.02
CCDC144A-211ENST00000463809 TMUB1Q9BVT8 246 aa14.92□□□□□ -0.02
CCDC144A-211ENST00000463809 SLC24A3Q9HC58 644 aa14.92□□□□□ -0.02
CCDC144A-211ENST00000463809 ITGBL1O95965 494 aaPredicted RBP14.91□□□□□ -0.02
CCDC144A-211ENST00000463809 CFHP08603 1231 aa14.91□□□□□ -0.02
CCDC144A-211ENST00000463809 TRIM66O15016 1216 aa14.9□□□□□ -0.02
CCDC144A-211ENST00000463809 AMHR2Q16671 573 aa14.9□□□□□ -0.02
CCDC144A-211ENST00000463809 RSPH4AQ5TD94 716 aa14.9□□□□□ -0.02
CCDC144A-211ENST00000463809 SULF1Q8IWU6 871 aa14.9□□□□□ -0.02
CCDC144A-211ENST00000463809 CLCN1P35523 988 aa14.89□□□□□ -0.03
CCDC144A-211ENST00000463809 RDH13Q8NBN7 331 aa14.89□□□□□ -0.03
CCDC144A-211ENST00000463809 REPIN1Q9BWE0 567 aaKnown RBP14.89□□□□□ -0.03
CCDC144A-211ENST00000463809 PRR14Q9BWN1 585 aa14.89□□□□□ -0.03
CCDC144A-211ENST00000463809 GPCPD1Q9NPB8 672 aa14.89□□□□□ -0.03
CCDC144A-211ENST00000463809 KMT5BQ4FZB7 885 aa14.88□□□□□ -0.03
CCDC144A-211ENST00000463809 ACTN4O43707 911 aaKnown RBP14.87□□□□□ -0.03
CCDC144A-211ENST00000463809 TJAP1Q5JTD0 557 aa14.87□□□□□ -0.03
CCDC144A-211ENST00000463809 IFFO2Q5TF58 517 aa14.86□□□□□ -0.03
CCDC144A-211ENST00000463809 MTRQ99707 1265 aa14.86□□□□□ -0.03
CCDC144A-211ENST00000463809 CD46P15529 392 aa14.84□□□□□ -0.03
CCDC144A-211ENST00000463809 FAM217BQ9NTX9 383 aaPredicted RBP14.84□□□□□ -0.03
CCDC144A-211ENST00000463809 GCGRP47871 477 aa14.83□□□□□ -0.04
CCDC144A-211ENST00000463809 PCDHB3Q9Y5E6 796 aa14.83□□□□□ -0.04
CCDC144A-211ENST00000463809 KCNC4Q03721 635 aa14.82□□□□□ -0.04
CCDC144A-211ENST00000463809 TTLL12Q14166 644 aaPredicted RBP14.82□□□□□ -0.04
CCDC144A-211ENST00000463809 IL21Q9HBE4 155 aa14.81□□□□□ -0.04
CCDC144A-211ENST00000463809 COPS2P61201 443 aa14.79□□□□□ -0.04
CCDC144A-211ENST00000463809 BLOC1S3Q6QNY0 202 aa14.79□□□□□ -0.04
CCDC144A-211ENST00000463809 PARP9Q8IXQ6 854 aa14.79□□□□□ -0.04
CCDC144A-211ENST00000463809 ZNF516Q92618 1163 aa14.79□□□□□ -0.04
CCDC144A-211ENST00000463809 GIGYF2Q6Y7W6 1299 aaKnown RBP14.78□□□□□ -0.04
CCDC144A-211ENST00000463809 PDE4DQ08499 809 aa14.77□□□□□ -0.05
CCDC144A-211ENST00000463809 SSTR3P32745 418 aaPredicted RBP14.76□□□□□ -0.05
CCDC144A-211ENST00000463809 FUT2Q10981 343 aa14.76□□□□□ -0.05
CCDC144A-211ENST00000463809 PUS10Q3MIT2 529 aaKnown RBP14.74□□□□□ -0.05
CCDC144A-211ENST00000463809 ZPR1O75312 459 aa14.73□□□□□ -0.05
CCDC144A-211ENST00000463809 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
CCDC144A-211ENST00000463809 ATP6V1AP38606 617 aa14.71□□□□□ -0.05
CCDC144A-211ENST00000463809 KDM4AO75164 1064 aa14.7□□□□□ -0.06
CCDC144A-211ENST00000463809 MORN1Q5T089 497 aa14.7□□□□□ -0.06
CCDC144A-211ENST00000463809 A0A0G2JS52 829 aa14.69□□□□□ -0.06
CCDC144A-211ENST00000463809 NR1I2O75469 434 aa14.69□□□□□ -0.06
CCDC144A-211ENST00000463809 NKX2-3Q8TAU0 364 aa14.69□□□□□ -0.06
CCDC144A-211ENST00000463809 MS4A1P11836 297 aa14.68□□□□□ -0.06
CCDC144A-211ENST00000463809 SCUBE3Q8IX30 993 aa14.68□□□□□ -0.06
CCDC144A-211ENST00000463809 TLL1O43897 1013 aa14.65□□□□□ -0.06
CCDC144A-211ENST00000463809 USP46P62068 366 aa14.64□□□□□ -0.07
CCDC144A-211ENST00000463809 GRIPAP1Q4V328 841 aa14.64□□□□□ -0.07
CCDC144A-211ENST00000463809 BEGAINQ9BUH8 593 aa14.64□□□□□ -0.07
CCDC144A-211ENST00000463809 SLC27A5Q9Y2P5 690 aa14.64□□□□□ -0.07
CCDC144A-211ENST00000463809 HOXA2O43364 376 aa14.62□□□□□ -0.07
CCDC144A-211ENST00000463809 NUTM1Q86Y26 1132 aa14.62□□□□□ -0.07
CCDC144A-211ENST00000463809 SPIRE2Q8WWL2 714 aa14.61□□□□□ -0.07
CCDC144A-211ENST00000463809 HLA-CQ95604 372 aa14.61□□□□□ -0.07
CCDC144A-211ENST00000463809 THAP11Q96EK4 314 aa14.6□□□□□ -0.07
CCDC144A-211ENST00000463809 ADH1BP00325 375 aa14.58□□□□□ -0.08
CCDC144A-211ENST00000463809 PPP1R18Q6NYC8 613 aa14.58□□□□□ -0.08
CCDC144A-211ENST00000463809 GPBP1L1Q9HC44 474 aaPredicted RBP14.58□□□□□ -0.08
CCDC144A-211ENST00000463809 SALL2Q9Y467 1007 aaPredicted RBP14.57□□□□□ -0.08
CCDC144A-211ENST00000463809 GUCA2AQ02747 115 aa14.56□□□□□ -0.08
CCDC144A-211ENST00000463809 SPSB2Q99619 263 aa14.56□□□□□ -0.08
CCDC144A-211ENST00000463809 BRICD5Q6PL45 260 aa14.55□□□□□ -0.08
CCDC144A-211ENST00000463809 KDM4CQ9H3R0 1056 aa14.55□□□□□ -0.08
CCDC144A-211ENST00000463809 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
CCDC144A-211ENST00000463809 RNF19BQ6ZMZ0 732 aa14.54□□□□□ -0.08
CCDC144A-211ENST00000463809 TBC1D2Q9BYX2 928 aa14.54□□□□□ -0.08
CCDC144A-211ENST00000463809 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.54□□□□□ -0.08
CCDC144A-211ENST00000463809 MOXD2PA6NHM9 499 aa14.52□□□□□ -0.09
CCDC144A-211ENST00000463809 PRKCSHP14314 528 aaPredicted RBP14.52□□□□□ -0.09
CCDC144A-211ENST00000463809 Q3C1V9 767 aa14.52□□□□□ -0.09
CCDC144A-211ENST00000463809 S1PR4O95977 384 aa14.51□□□□□ -0.09
CCDC144A-211ENST00000463809 NDUFV2P19404 249 aa14.51□□□□□ -0.09
CCDC144A-211ENST00000463809 DIXDC1Q155Q3 683 aa14.51□□□□□ -0.09
CCDC144A-211ENST00000463809 FDX1P10109 184 aa14.5□□□□□ -0.09
CCDC144A-211ENST00000463809 GGCXP38435 758 aa14.5□□□□□ -0.09
CCDC144A-211ENST00000463809 FAM160A2Q8N612 972 aaPredicted RBP14.5□□□□□ -0.09
CCDC144A-211ENST00000463809 SLC6A16Q9GZN6 736 aa14.5□□□□□ -0.09
CCDC144A-211ENST00000463809 PCDHGC3Q9UN70 934 aa14.5□□□□□ -0.09
CCDC144A-211ENST00000463809 RGS20O76081 388 aa14.48□□□□□ -0.09
CCDC144A-211ENST00000463809 RNF223E7ERA6 249 aa14.47□□□□□ -0.09
CCDC144A-211ENST00000463809 FAM117AQ9C073 453 aa14.46□□□□□ -0.09
CCDC144A-211ENST00000463809 GJA5P36382 358 aa14.45□□□□□ -0.1
CCDC144A-211ENST00000463809 MSS51Q4VC12 460 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms