RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 SYNMO15061 1565 aa27.82■■■□□ 2.04
GCOM1-204ENST00000463717 GGT6Q6P531 493 aa27.81■■■□□ 2.04
GCOM1-204ENST00000463717 TESK2Q96S53 571 aa27.81■■■□□ 2.04
GCOM1-204ENST00000463717 MYO3AQ8NEV4 1616 aa27.81■■■□□ 2.04
GCOM1-204ENST00000463717 WASHC2CQ9Y4E1 1318 aa27.81■■■□□ 2.04
GCOM1-204ENST00000463717 AGLP35573 1532 aa27.8■■■□□ 2.04
GCOM1-204ENST00000463717 TMF1P82094 1093 aa27.79■■■□□ 2.04
GCOM1-204ENST00000463717 MRS2Q9HD23 443 aa27.78■■■□□ 2.04
GCOM1-204ENST00000463717 PREX1Q8TCU6 1659 aa27.78■■■□□ 2.04
GCOM1-204ENST00000463717 DISP3Q9P2K9 1392 aa27.77■■■□□ 2.04
GCOM1-204ENST00000463717 KDM5AP29375 1690 aaKnown RBP27.75■■■□□ 2.03
GCOM1-204ENST00000463717 RPGRIP1LQ68CZ1 1315 aa27.74■■■□□ 2.03
GCOM1-204ENST00000463717 ARHGEF40Q8TER5 1519 aa27.73■■■□□ 2.03
GCOM1-204ENST00000463717 SLC24A1O60721 1099 aa27.72■■■□□ 2.03
GCOM1-204ENST00000463717 HNRNPUQ00839 825 aaKnown RBP eCLIP27.72■■■□□ 2.03
GCOM1-204ENST00000463717 RALBP1Q15311 655 aa27.72■■■□□ 2.03
GCOM1-204ENST00000463717 CDCA8Q53HL2 280 aa27.7■■■□□ 2.02
GCOM1-204ENST00000463717 PIK3C2GO75747 1445 aa27.7■■■□□ 2.02
GCOM1-204ENST00000463717 CCDC184Q52MB2 194 aa27.68■■■□□ 2.02
GCOM1-204ENST00000463717 MYOM1P52179 1685 aa27.68■■■□□ 2.02
GCOM1-204ENST00000463717 NEXMIFQ5QGS0 1516 aa27.68■■■□□ 2.02
GCOM1-204ENST00000463717 BRD4O60885 1362 aaPredicted RBP27.66■■■□□ 2.02
GCOM1-204ENST00000463717 MYBBP1AQ9BQG0 1328 aaKnown RBP27.66■■■□□ 2.02
GCOM1-204ENST00000463717 ADGRF5Q8IZF2 1346 aa27.65■■■□□ 2.02
GCOM1-204ENST00000463717 PARD3Q8TEW0 1356 aa27.65■■■□□ 2.02
GCOM1-204ENST00000463717 SBNO2Q9Y2G9 1366 aa27.64■■■□□ 2.02
GCOM1-204ENST00000463717 PPP6R1Q9UPN7 881 aa27.63■■■□□ 2.01
GCOM1-204ENST00000463717 MYO5BQ9ULV0 1848 aa27.62■■■□□ 2.01
GCOM1-204ENST00000463717 ZBED9Q6R2W3 1325 aa27.61■■■□□ 2.01
GCOM1-204ENST00000463717 ADGRB1O14514 1584 aa27.61■■■□□ 2.01
GCOM1-204ENST00000463717 TMEM131LA2VDJ0 1609 aa27.61■■■□□ 2.01
GCOM1-204ENST00000463717 CLTCQ00610 1675 aaKnown RBP27.6■■■□□ 2.01
GCOM1-204ENST00000463717 FAM9BQ8IZU0 186 aa27.59■■■□□ 2.01
GCOM1-204ENST00000463717 SLC52A1Q9NWF4 448 aa27.59■■■□□ 2.01
GCOM1-204ENST00000463717 QRICH2Q9H0J4 1663 aa27.59■■■□□ 2.01
GCOM1-204ENST00000463717 ZFYVE9O95405 1425 aa27.59■■■□□ 2.01
GCOM1-204ENST00000463717 CHGAP10645 457 aaKnown RBP27.59■■■□□ 2.01
GCOM1-204ENST00000463717 SUPT16HQ9Y5B9 1047 aaKnown RBP27.59■■■□□ 2.01
GCOM1-204ENST00000463717 CFAP70Q5T0N1 1121 aa27.58■■■□□ 2.01
GCOM1-204ENST00000463717 ERVK-7P63135 1459 aa27.58■■■□□ 2.01
GCOM1-204ENST00000463717 PER1O15534 1290 aaPredicted RBP27.57■■■□□ 2
GCOM1-204ENST00000463717 NEFLP07196 543 aa27.53■■■□□ 2
GCOM1-204ENST00000463717 ARHGEF28Q8N1W1 1705 aaKnown RBP27.53■■■□□ 2
GCOM1-204ENST00000463717 SPATA31D1Q6ZQQ2 1576 aa27.53■■■□□ 2
GCOM1-204ENST00000463717 TMC1Q8TDI8 760 aa27.52■■■□□ 2
GCOM1-204ENST00000463717 C14orf93Q9H972 538 aaKnown RBP27.52■■■□□ 2
GCOM1-204ENST00000463717 NLRP13Q86W25 1043 aa27.52■■■□□ 2
GCOM1-204ENST00000463717 LRPPRCP42704 1394 aaKnown RBP27.51■■□□□ 1.99
GCOM1-204ENST00000463717 PANK3Q9H999 370 aa27.51■■□□□ 1.99
GCOM1-204ENST00000463717 VGFO15240 615 aaPredicted RBP27.49■■□□□ 1.99
GCOM1-204ENST00000463717 ASXL1Q8IXJ9 1541 aa27.49■■□□□ 1.99
GCOM1-204ENST00000463717 PNISRQ8TF01 805 aaKnown RBP27.47■■□□□ 1.99
GCOM1-204ENST00000463717 INSRP06213 1382 aa27.47■■□□□ 1.99
GCOM1-204ENST00000463717 NPC1L1Q9UHC9 1359 aa27.47■■□□□ 1.99
GCOM1-204ENST00000463717 CENPJQ9HC77 1338 aaPredicted RBP27.45■■□□□ 1.99
GCOM1-204ENST00000463717 IDI1Q13907 227 aa27.44■■□□□ 1.98
GCOM1-204ENST00000463717 CNGB1Q14028 1251 aaPredicted RBP27.44■■□□□ 1.98
GCOM1-204ENST00000463717 PELP1Q8IZL8 1130 aaKnown RBP27.4■■□□□ 1.98
GCOM1-204ENST00000463717 KNSTRNQ9Y448 316 aa27.4■■□□□ 1.98
GCOM1-204ENST00000463717 USP32Q8NFA0 1604 aa27.38■■□□□ 1.97
GCOM1-204ENST00000463717 FKBP8Q14318 412 aa27.36■■□□□ 1.97
GCOM1-204ENST00000463717 SMG6Q86US8 1419 aaKnown RBP27.35■■□□□ 1.97
GCOM1-204ENST00000463717 CC2D1BQ5T0F9 858 aaKnown RBP27.34■■□□□ 1.97
GCOM1-204ENST00000463717 AMER1Q5JTC6 1135 aaPredicted RBP27.33■■□□□ 1.97
GCOM1-204ENST00000463717 PUS7Q96PZ0 661 aaKnown RBP27.32■■□□□ 1.96
GCOM1-204ENST00000463717 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
GCOM1-204ENST00000463717 TRAK1Q9UPV9 953 aa27.3■■□□□ 1.96
GCOM1-204ENST00000463717 A2ML1A8K2U0 1454 aa27.3■■□□□ 1.96
GCOM1-204ENST00000463717 ALKQ9UM73 1620 aa27.29■■□□□ 1.96
GCOM1-204ENST00000463717 TULP4Q9NRJ4 1543 aa27.29■■□□□ 1.96
GCOM1-204ENST00000463717 SETD1AO15047 1707 aaKnown RBP27.28■■□□□ 1.96
GCOM1-204ENST00000463717 FBXO31Q5XUX0 539 aaPredicted RBP27.27■■□□□ 1.96
GCOM1-204ENST00000463717 ERICH6BQ5W0A0 696 aa27.26■■□□□ 1.95
GCOM1-204ENST00000463717 TMEM132EQ6IEE7 984 aa27.25■■□□□ 1.95
GCOM1-204ENST00000463717 PTPRMP28827 1452 aa27.24■■□□□ 1.95
GCOM1-204ENST00000463717 DLC1Q96QB1 1528 aa27.23■■□□□ 1.95
GCOM1-204ENST00000463717 ESF1Q9H501 851 aaKnown RBP27.23■■□□□ 1.95
GCOM1-204ENST00000463717 STAG3Q9UJ98 1225 aa27.23■■□□□ 1.95
GCOM1-204ENST00000463717 NUDCQ9Y266 331 aa27.23■■□□□ 1.95
GCOM1-204ENST00000463717 EVC2Q86UK5 1308 aa27.23■■□□□ 1.95
GCOM1-204ENST00000463717 NINLQ9Y2I6 1382 aa27.22■■□□□ 1.95
GCOM1-204ENST00000463717 YTHDC2Q9H6S0 1430 aaKnown RBP27.22■■□□□ 1.95
GCOM1-204ENST00000463717 RIMS2Q9UQ26 1411 aa27.22■■□□□ 1.95
GCOM1-204ENST00000463717 PPP2R1AP30153 589 aa27.21■■□□□ 1.95
GCOM1-204ENST00000463717 NUTM2DQ5VT03 806 aaPredicted RBP27.2■■□□□ 1.94
GCOM1-204ENST00000463717 ZMYM3Q14202 1370 aa27.19■■□□□ 1.94
GCOM1-204ENST00000463717 MLECQ14165 292 aa27.17■■□□□ 1.94
GCOM1-204ENST00000463717 KNDC1Q76NI1 1749 aa27.17■■□□□ 1.94
GCOM1-204ENST00000463717 UBR1Q8IWV7 1749 aa27.17■■□□□ 1.94
GCOM1-204ENST00000463717 NRXN3Q9Y4C0 1643 aa27.16■■□□□ 1.94
GCOM1-204ENST00000463717 NSD3Q9BZ95 1437 aa27.15■■□□□ 1.94
GCOM1-204ENST00000463717 PDE3BQ13370 1112 aa27.15■■□□□ 1.94
GCOM1-204ENST00000463717 TNRQ92752 1358 aa27.14■■□□□ 1.94
GCOM1-204ENST00000463717 ANKRD36BQ8N2N9 1353 aa27.13■■□□□ 1.93
GCOM1-204ENST00000463717 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.13■■□□□ 1.93
GCOM1-204ENST00000463717 NSD2O96028 1365 aa27.13■■□□□ 1.93
GCOM1-204ENST00000463717 CARD14Q9BXL6 1004 aa27.11■■□□□ 1.93
GCOM1-204ENST00000463717 ANKRD26Q9UPS8 1709 aa27.11■■□□□ 1.93
GCOM1-204ENST00000463717 ATAD2Q6PL18 1390 aa27.1■■□□□ 1.93
GCOM1-204ENST00000463717 FER1L4A9Z1Z3 1794 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms