RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 FAM135BQ49AJ0 1406 aa23.59■■□□□ 1.37
CMSS1-202ENST00000463526 ITGAEP38570 1179 aa23.58■■□□□ 1.37
CMSS1-202ENST00000463526 NUTM2DQ5VT03 806 aaPredicted RBP23.57■■□□□ 1.36
CMSS1-202ENST00000463526 RPRD2Q5VT52 1461 aaKnown RBP23.56■■□□□ 1.36
CMSS1-202ENST00000463526 HDGFP51858 240 aaKnown RBP23.56■■□□□ 1.36
CMSS1-202ENST00000463526 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
CMSS1-202ENST00000463526 RIMS2Q9UQ26 1411 aa23.56■■□□□ 1.36
CMSS1-202ENST00000463526 RGS17Q9UGC6 210 aaPredicted RBP23.54■■□□□ 1.36
CMSS1-202ENST00000463526 MSH6P52701 1360 aa23.52■■□□□ 1.36
CMSS1-202ENST00000463526 PLEKHG1Q9ULL1 1385 aa23.52■■□□□ 1.36
CMSS1-202ENST00000463526 ZFYVE9O95405 1425 aa23.52■■□□□ 1.36
CMSS1-202ENST00000463526 NKTRP30414 1462 aaKnown RBP23.5■■□□□ 1.35
CMSS1-202ENST00000463526 SLAIN2Q9P270 581 aa23.5■■□□□ 1.35
CMSS1-202ENST00000463526 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.49■■□□□ 1.35
CMSS1-202ENST00000463526 C14orf37Q86TY3 774 aa23.48■■□□□ 1.35
CMSS1-202ENST00000463526 TBX22Q9Y458 520 aa23.48■■□□□ 1.35
CMSS1-202ENST00000463526 MYO5BQ9ULV0 1848 aa23.47■■□□□ 1.35
CMSS1-202ENST00000463526 NUP155O75694 1391 aa23.47■■□□□ 1.35
CMSS1-202ENST00000463526 ROCK1Q13464 1354 aa23.47■■□□□ 1.35
CMSS1-202ENST00000463526 NWD1Q149M9 1564 aa23.47■■□□□ 1.35
CMSS1-202ENST00000463526 GCC2Q8IWJ2 1684 aa23.47■■□□□ 1.35
CMSS1-202ENST00000463526 ROBO1Q9Y6N7 1651 aa23.47■■□□□ 1.35
CMSS1-202ENST00000463526 TMEM131LA2VDJ0 1609 aa23.46■■□□□ 1.35
CMSS1-202ENST00000463526 UNC13BO14795 1591 aa23.45■■□□□ 1.34
CMSS1-202ENST00000463526 POTEAQ6S8J7 498 aa23.43■■□□□ 1.34
CMSS1-202ENST00000463526 E9PCH4 1651 aa23.42■■□□□ 1.34
CMSS1-202ENST00000463526 ADAMTS13Q76LX8 1427 aa23.4■■□□□ 1.34
CMSS1-202ENST00000463526 CHD2O14647 1828 aaKnown RBP23.39■■□□□ 1.33
CMSS1-202ENST00000463526 AMOTL2Q9Y2J4 779 aa23.37■■□□□ 1.33
CMSS1-202ENST00000463526 IQGAP3Q86VI3 1631 aa23.37■■□□□ 1.33
CMSS1-202ENST00000463526 ATF3P18847 181 aa23.36■■□□□ 1.33
CMSS1-202ENST00000463526 ZNF326Q5BKZ1 582 aaKnown RBP23.36■■□□□ 1.33
CMSS1-202ENST00000463526 C19orf44Q9H6X5 657 aa23.35■■□□□ 1.33
CMSS1-202ENST00000463526 JCADQ9P266 1359 aa23.35■■□□□ 1.33
CMSS1-202ENST00000463526 CADPS2Q86UW7 1296 aa23.34■■□□□ 1.33
CMSS1-202ENST00000463526 PHLPP1O60346 1717 aa23.33■■□□□ 1.33
CMSS1-202ENST00000463526 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.32
CMSS1-202ENST00000463526 PIK3R4Q99570 1358 aa23.32■■□□□ 1.32
CMSS1-202ENST00000463526 PTPRUQ92729 1446 aa23.31■■□□□ 1.32
CMSS1-202ENST00000463526 DIP2AQ14689 1571 aa23.29■■□□□ 1.32
CMSS1-202ENST00000463526 MEX3CQ5U5Q3 659 aaKnown RBP23.28■■□□□ 1.32
CMSS1-202ENST00000463526 TRPM2O94759 1503 aa23.28■■□□□ 1.32
CMSS1-202ENST00000463526 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.25■■□□□ 1.31
CMSS1-202ENST00000463526 COL16A1Q07092 1604 aaPredicted RBP23.24■■□□□ 1.31
CMSS1-202ENST00000463526 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
CMSS1-202ENST00000463526 SPATA31A6Q5VVP1 1343 aa23.22■■□□□ 1.31
CMSS1-202ENST00000463526 METP08581 1390 aa23.22■■□□□ 1.31
CMSS1-202ENST00000463526 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
CMSS1-202ENST00000463526 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
CMSS1-202ENST00000463526 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
CMSS1-202ENST00000463526 LRP6O75581 1613 aa23.2■■□□□ 1.3
CMSS1-202ENST00000463526 TRIM52Q96A61 297 aa23.2■■□□□ 1.3
CMSS1-202ENST00000463526 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
CMSS1-202ENST00000463526 AHDC1Q5TGY3 1603 aaPredicted RBP23.17■■□□□ 1.3
CMSS1-202ENST00000463526 NRXN3Q9Y4C0 1643 aa23.17■■□□□ 1.3
CMSS1-202ENST00000463526 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
CMSS1-202ENST00000463526 ZNF772Q68DY9 489 aaPredicted RBP23.16■■□□□ 1.3
CMSS1-202ENST00000463526 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
CMSS1-202ENST00000463526 NAIPQ13075 1403 aa23.15■■□□□ 1.3
CMSS1-202ENST00000463526 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
CMSS1-202ENST00000463526 CLTCL1P53675 1640 aa23.13■■□□□ 1.29
CMSS1-202ENST00000463526 DCCP43146 1447 aa23.13■■□□□ 1.29
CMSS1-202ENST00000463526 MST1RQ04912 1400 aa23.13■■□□□ 1.29
CMSS1-202ENST00000463526 XRN1Q8IZH2 1706 aaKnown RBP23.13■■□□□ 1.29
CMSS1-202ENST00000463526 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
CMSS1-202ENST00000463526 ASXL1Q8IXJ9 1541 aa23.11■■□□□ 1.29
CMSS1-202ENST00000463526 NEXMIFQ5QGS0 1516 aa23.1■■□□□ 1.29
CMSS1-202ENST00000463526 LRRC59Q96AG4 307 aaKnown RBP23.09■■□□□ 1.29
CMSS1-202ENST00000463526 SLC4A1APQ9BWU0 796 aaKnown RBP23.09■■□□□ 1.29
CMSS1-202ENST00000463526 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.29
CMSS1-202ENST00000463526 VGFO15240 615 aaPredicted RBP23.08■■□□□ 1.29
CMSS1-202ENST00000463526 SHPRHQ149N8 1683 aa23.08■■□□□ 1.29
CMSS1-202ENST00000463526 RXRBP28702 533 aa23.07■■□□□ 1.28
CMSS1-202ENST00000463526 SETD5Q9C0A6 1442 aa23.06■■□□□ 1.28
CMSS1-202ENST00000463526 AFF2P51816 1311 aa23.06■■□□□ 1.28
CMSS1-202ENST00000463526 FOXD1Q16676 465 aa23.04■■□□□ 1.28
CMSS1-202ENST00000463526 C8orf37Q96NL8 207 aa23.03■■□□□ 1.28
CMSS1-202ENST00000463526 KIF1BO60333 1816 aa23.03■■□□□ 1.28
CMSS1-202ENST00000463526 ROBO2Q9HCK4 1378 aa23.02■■□□□ 1.28
CMSS1-202ENST00000463526 HFM1A2PYH4 1435 aa23.01■■□□□ 1.27
CMSS1-202ENST00000463526 UPF1Q92900 1129 aaKnown RBP eCLIP23.01■■□□□ 1.27
CMSS1-202ENST00000463526 ORAI2Q96SN7 254 aa23.01■■□□□ 1.27
CMSS1-202ENST00000463526 RPGRIP1LQ68CZ1 1315 aa23.01■■□□□ 1.27
CMSS1-202ENST00000463526 C1orf167Q5SNV9 1468 aa23■■□□□ 1.27
CMSS1-202ENST00000463526 PNPLA6Q8IY17 1366 aa23■■□□□ 1.27
CMSS1-202ENST00000463526 ADAMTS2O95450 1211 aa22.99■■□□□ 1.27
CMSS1-202ENST00000463526 NALCNQ8IZF0 1738 aa22.99■■□□□ 1.27
CMSS1-202ENST00000463526 NHSL1Q5SYE7 1610 aa22.98■■□□□ 1.27
CMSS1-202ENST00000463526 QTRT2Q9H974 415 aaKnown RBP22.97■■□□□ 1.27
CMSS1-202ENST00000463526 RGL3Q3MIN7 710 aa22.96■■□□□ 1.27
CMSS1-202ENST00000463526 PTCH1Q13635 1447 aa22.96■■□□□ 1.27
CMSS1-202ENST00000463526 NGLY1Q96IV0 654 aa22.95■■□□□ 1.26
CMSS1-202ENST00000463526 STK26Q9P289 416 aa22.93■■□□□ 1.26
CMSS1-202ENST00000463526 ADGRF5Q8IZF2 1346 aa22.92■■□□□ 1.26
CMSS1-202ENST00000463526 SOS2Q07890 1332 aaPredicted RBP22.91■■□□□ 1.26
CMSS1-202ENST00000463526 RBM6P78332 1123 aaKnown RBP22.91■■□□□ 1.26
CMSS1-202ENST00000463526 ESCO1Q5FWF5 840 aa22.9■■□□□ 1.26
CMSS1-202ENST00000463526 NUTM2FA1L443 756 aa22.89■■□□□ 1.25
CMSS1-202ENST00000463526 WAPLQ7Z5K2 1190 aa22.88■■□□□ 1.25
CMSS1-202ENST00000463526 MPHOSPH9Q99550 1183 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms