RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 PROSER2Q86WR7 435 aaPredicted RBP17.65■□□□□ 0.42
SSR3-202ENST00000463503 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
SSR3-202ENST00000463503 TMEM131LA2VDJ0 1609 aa17.65■□□□□ 0.42
SSR3-202ENST00000463503 ZFYVE9O95405 1425 aa17.64■□□□□ 0.42
SSR3-202ENST00000463503 ABCC5O15440 1437 aa17.64■□□□□ 0.41
SSR3-202ENST00000463503 IDI1Q13907 227 aa17.62■□□□□ 0.41
SSR3-202ENST00000463503 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
SSR3-202ENST00000463503 CDK12Q9NYV4 1490 aaPredicted RBP17.62■□□□□ 0.41
SSR3-202ENST00000463503 SLAIN2Q9P270 581 aa17.61■□□□□ 0.41
SSR3-202ENST00000463503 NHSL1Q5SYE7 1610 aa17.61■□□□□ 0.41
SSR3-202ENST00000463503 SPATA31A6Q5VVP1 1343 aa17.6■□□□□ 0.41
SSR3-202ENST00000463503 DAPK1P53355 1430 aa17.59■□□□□ 0.41
SSR3-202ENST00000463503 EP400Q96L91 3159 aa17.59■□□□□ 0.41
SSR3-202ENST00000463503 KANK1Q14678 1352 aa17.58■□□□□ 0.4
SSR3-202ENST00000463503 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.4
SSR3-202ENST00000463503 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
SSR3-202ENST00000463503 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
SSR3-202ENST00000463503 KANK4Q5T7N3 995 aaPredicted RBP17.56■□□□□ 0.4
SSR3-202ENST00000463503 TRIM52Q96A61 297 aa17.56■□□□□ 0.4
SSR3-202ENST00000463503 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
SSR3-202ENST00000463503 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
SSR3-202ENST00000463503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.47e-7■■□□□ 13.2
SSR3-202ENST00000463503 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
SSR3-202ENST00000463503 XRN1Q8IZH2 1706 aaKnown RBP17.54■□□□□ 0.4
SSR3-202ENST00000463503 ADAMTS13Q76LX8 1427 aa17.53■□□□□ 0.4
SSR3-202ENST00000463503 RIMS2Q9UQ26 1411 aa17.53■□□□□ 0.4
SSR3-202ENST00000463503 E9PCH4 1651 aa17.52■□□□□ 0.4
SSR3-202ENST00000463503 RGS12O14924 1447 aa17.52■□□□□ 0.4
SSR3-202ENST00000463503 UNC13BO14795 1591 aa17.52■□□□□ 0.39
SSR3-202ENST00000463503 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.39
SSR3-202ENST00000463503 NRXN3Q9Y4C0 1643 aa17.51■□□□□ 0.39
SSR3-202ENST00000463503 ADGRL2O95490 1459 aa17.5■□□□□ 0.39
SSR3-202ENST00000463503 MEX3CQ5U5Q3 659 aaKnown RBP17.5■□□□□ 0.39
SSR3-202ENST00000463503 TRPM2O94759 1503 aa17.49■□□□□ 0.39
SSR3-202ENST00000463503 SLC52A1Q9NWF4 448 aa17.49■□□□□ 0.39
SSR3-202ENST00000463503 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
SSR3-202ENST00000463503 RXRBP28702 533 aa17.47■□□□□ 0.39
SSR3-202ENST00000463503 DCCP43146 1447 aa17.47■□□□□ 0.39
SSR3-202ENST00000463503 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
SSR3-202ENST00000463503 ANKRD30AQ9BXX3 1397 aa17.46■□□□□ 0.39
SSR3-202ENST00000463503 LAMC1P11047 1609 aa17.46■□□□□ 0.39
SSR3-202ENST00000463503 PIK3R4Q99570 1358 aa17.45■□□□□ 0.38
SSR3-202ENST00000463503 IQGAP3Q86VI3 1631 aa17.44■□□□□ 0.38
SSR3-202ENST00000463503 BRINP3Q76B58 766 aa17.44■□□□□ 0.38
SSR3-202ENST00000463503 CADPS2Q86UW7 1296 aa17.44■□□□□ 0.38
SSR3-202ENST00000463503 BCANQ96GW7 911 aa17.44■□□□□ 0.38
SSR3-202ENST00000463503 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
SSR3-202ENST00000463503 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
SSR3-202ENST00000463503 AFF2P51816 1311 aa17.44■□□□□ 0.38
SSR3-202ENST00000463503 MST1RQ04912 1400 aa17.43■□□□□ 0.38
SSR3-202ENST00000463503 C19orf44Q9H6X5 657 aa17.42■□□□□ 0.38
SSR3-202ENST00000463503 SETBP1Q9Y6X0 1596 aa17.41■□□□□ 0.38
SSR3-202ENST00000463503 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
SSR3-202ENST00000463503 MARF1Q9Y4F3 1742 aaKnown RBP17.39■□□□□ 0.37
SSR3-202ENST00000463503 ATF3P18847 181 aa17.39■□□□□ 0.37
SSR3-202ENST00000463503 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
SSR3-202ENST00000463503 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
SSR3-202ENST00000463503 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
SSR3-202ENST00000463503 NUTM2AQ8IVF1 878 aaPredicted RBP17.38■□□□□ 0.37
SSR3-202ENST00000463503 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
SSR3-202ENST00000463503 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
SSR3-202ENST00000463503 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
SSR3-202ENST00000463503 SPHKAPQ2M3C7 1700 aa17.37■□□□□ 0.37
SSR3-202ENST00000463503 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
SSR3-202ENST00000463503 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.36
SSR3-202ENST00000463503 RBM6P78332 1123 aaKnown RBP17.33■□□□□ 0.36
SSR3-202ENST00000463503 NUTM2DQ5VT03 806 aaPredicted RBP17.33■□□□□ 0.36
SSR3-202ENST00000463503 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.33■□□□□ 0.36
SSR3-202ENST00000463503 ADGRL3Q9HAR2 1447 aa17.32■□□□□ 0.36
SSR3-202ENST00000463503 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
SSR3-202ENST00000463503 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
SSR3-202ENST00000463503 AMOTL2Q9Y2J4 779 aa17.31■□□□□ 0.36
SSR3-202ENST00000463503 QTRT2Q9H974 415 aaKnown RBP17.3■□□□□ 0.36
SSR3-202ENST00000463503 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.3■□□□□ 0.36
SSR3-202ENST00000463503 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
SSR3-202ENST00000463503 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.36
SSR3-202ENST00000463503 BRWD3Q6RI45 1802 aa17.27■□□□□ 0.36
SSR3-202ENST00000463503 LRRC59Q96AG4 307 aaKnown RBP17.27■□□□□ 0.36
SSR3-202ENST00000463503 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
SSR3-202ENST00000463503 ATRNO75882 1429 aa17.26■□□□□ 0.35
SSR3-202ENST00000463503 METP08581 1390 aa17.26■□□□□ 0.35
SSR3-202ENST00000463503 LRP5O75197 1615 aa17.25■□□□□ 0.35
SSR3-202ENST00000463503 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
SSR3-202ENST00000463503 CLTCL1P53675 1640 aa17.24■□□□□ 0.35
SSR3-202ENST00000463503 PTCH1Q13635 1447 aa17.23■□□□□ 0.35
SSR3-202ENST00000463503 KIF1BO60333 1816 aa17.23■□□□□ 0.35
SSR3-202ENST00000463503 MYOM2P54296 1465 aa17.22■□□□□ 0.35
SSR3-202ENST00000463503 ADAMTS2O95450 1211 aa17.21■□□□□ 0.35
SSR3-202ENST00000463503 NGLY1Q96IV0 654 aa17.21■□□□□ 0.35
SSR3-202ENST00000463503 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
SSR3-202ENST00000463503 GLI3P10071 1580 aa17.19■□□□□ 0.34
SSR3-202ENST00000463503 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
SSR3-202ENST00000463503 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
SSR3-202ENST00000463503 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
SSR3-202ENST00000463503 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
SSR3-202ENST00000463503 USP21Q9UK80 565 aa17.17■□□□□ 0.34
SSR3-202ENST00000463503 TRPC5Q9UL62 973 aaPredicted RBP17.17■□□□□ 0.34
SSR3-202ENST00000463503 PXDNQ92626 1479 aa17.17■□□□□ 0.34
SSR3-202ENST00000463503 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
SSR3-202ENST00000463503 ROCK1Q13464 1354 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms