RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 CLCN1P35523 988 aa8.65□□□□□ -1.02
VRK2-208ENST00000463222 FLIIQ13045 1269 aa8.65□□□□□ -1.02
VRK2-208ENST00000463222 NLRP7Q8WX94 980 aa8.65□□□□□ -1.02
VRK2-208ENST00000463222 RABGEF1Q9UJ41 708 aa8.65□□□□□ -1.02
VRK2-208ENST00000463222 C1orf115Q9H7X2 142 aa8.64□□□□□ -1.03
VRK2-208ENST00000463222 GPCPD1Q9NPB8 672 aa8.64□□□□□ -1.03
VRK2-208ENST00000463222 ATP1B4Q9UN42 357 aaPredicted RBP8.63□□□□□ -1.03
VRK2-208ENST00000463222 APBB1O00213 710 aa8.61□□□□□ -1.03
VRK2-208ENST00000463222 ONECUT3O60422 494 aaPredicted RBP8.61□□□□□ -1.03
VRK2-208ENST00000463222 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
VRK2-208ENST00000463222 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
VRK2-208ENST00000463222 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
VRK2-208ENST00000463222 LAPTM4BQ86VI4 370 aa8.61□□□□□ -1.03
VRK2-208ENST00000463222 ANKK1Q8NFD2 765 aa8.61□□□□□ -1.03
VRK2-208ENST00000463222 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
VRK2-208ENST00000463222 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
VRK2-208ENST00000463222 COL9A1P20849 921 aa8.6□□□□□ -1.03
VRK2-208ENST00000463222 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
VRK2-208ENST00000463222 PROCA1Q8NCQ7 364 aaPredicted RBP8.6□□□□□ -1.03
VRK2-208ENST00000463222 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
VRK2-208ENST00000463222 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
VRK2-208ENST00000463222 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
VRK2-208ENST00000463222 NYAP1Q6ZVC0 841 aa8.59□□□□□ -1.03
VRK2-208ENST00000463222 METTL3Q86U44 580 aaKnown RBP8.59□□□□□ -1.03
VRK2-208ENST00000463222 OATP04181 439 aa8.58□□□□□ -1.04
VRK2-208ENST00000463222 FAM217BQ9NTX9 383 aaPredicted RBP8.58□□□□□ -1.04
VRK2-208ENST00000463222 ADGRG1Q9Y653 693 aa8.57□□□□□ -1.04
VRK2-208ENST00000463222 SOWAHBA6NEL2 793 aa8.56□□□□□ -1.04
VRK2-208ENST00000463222 PXYLP1Q8TE99 480 aa8.56□□□□□ -1.04
VRK2-208ENST00000463222 IRX2Q9BZI1 471 aaPredicted RBP8.56□□□□□ -1.04
VRK2-208ENST00000463222 TRAK2O60296 914 aa8.54□□□□□ -1.04
VRK2-208ENST00000463222 CERKQ8TCT0 537 aa8.54□□□□□ -1.04
VRK2-208ENST00000463222 A6NJR5 290 aa8.53□□□□□ -1.04
VRK2-208ENST00000463222 BCAMP50895 628 aa8.53□□□□□ -1.04
VRK2-208ENST00000463222 MCM6Q14566 821 aa8.53□□□□□ -1.04
VRK2-208ENST00000463222 TTC13Q8NBP0 860 aa8.53□□□□□ -1.04
VRK2-208ENST00000463222 ZFRQ96KR1 1074 aaKnown RBP8.53□□□□□ -1.04
VRK2-208ENST00000463222 KIAA1468Q9P260 1216 aa8.53□□□□□ -1.04
VRK2-208ENST00000463222 PRSS12P56730 875 aa8.52□□□□□ -1.05
VRK2-208ENST00000463222 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
VRK2-208ENST00000463222 TRIM6-TRIM34B2RNG4 842 aa8.51□□□□□ -1.05
VRK2-208ENST00000463222 CDCA7LQ96GN5 454 aa8.51□□□□□ -1.05
VRK2-208ENST00000463222 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
VRK2-208ENST00000463222 POM121Q96HA1 1249 aa8.5□□□□□ -1.05
VRK2-208ENST00000463222 TBC1D2Q9BYX2 928 aa8.5□□□□□ -1.05
VRK2-208ENST00000463222 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
VRK2-208ENST00000463222 RBM46Q8TBY0 533 aaKnown RBP8.49□□□□□ -1.05
VRK2-208ENST00000463222 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
VRK2-208ENST00000463222 ZNF777Q9ULD5 760 aaPredicted RBP8.49□□□□□ -1.05
VRK2-208ENST00000463222 FBXO31Q5XUX0 539 aaPredicted RBP8.48□□□□□ -1.05
VRK2-208ENST00000463222 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
VRK2-208ENST00000463222 WBP1LQ9NX94 342 aa8.48□□□□□ -1.05
VRK2-208ENST00000463222 RBM27Q9P2N5 1060 aaKnown RBP8.48□□□□□ -1.05
VRK2-208ENST00000463222 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
VRK2-208ENST00000463222 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
VRK2-208ENST00000463222 SEPT9Q9UHD8 586 aaPredicted RBP8.47□□□□□ -1.05
VRK2-208ENST00000463222 RCCD1A6NED2 376 aa8.46□□□□□ -1.06
VRK2-208ENST00000463222 KCNC4Q03721 635 aa8.46□□□□□ -1.06
VRK2-208ENST00000463222 TRIM26Q12899 539 aaPredicted RBP8.46□□□□□ -1.06
VRK2-208ENST00000463222 SNRKQ9NRH2 765 aa8.46□□□□□ -1.06
VRK2-208ENST00000463222 LIMD1Q9UGP4 676 aa8.46□□□□□ -1.06
VRK2-208ENST00000463222 TSR3Q9UJK0 312 aaKnown RBP8.46□□□□□ -1.06
VRK2-208ENST00000463222 RAD21O60216 631 aa8.45□□□□□ -1.06
VRK2-208ENST00000463222 RFC5P40937 340 aa8.45□□□□□ -1.06
VRK2-208ENST00000463222 PROSER2Q86WR7 435 aaPredicted RBP8.45□□□□□ -1.06
VRK2-208ENST00000463222 SPIRE2Q8WWL2 714 aa8.45□□□□□ -1.06
VRK2-208ENST00000463222 LRCH3Q96II8 777 aa8.45□□□□□ -1.06
VRK2-208ENST00000463222 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.45□□□□□ -1.06
VRK2-208ENST00000463222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.44□□□□□ -1.06
VRK2-208ENST00000463222 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
VRK2-208ENST00000463222 RIC3Q7Z5B4 369 aa8.44□□□□□ -1.06
VRK2-208ENST00000463222 EYA1Q99502 592 aa8.44□□□□□ -1.06
VRK2-208ENST00000463222 DIXDC1Q155Q3 683 aa8.43□□□□□ -1.06
VRK2-208ENST00000463222 NUDT18Q6ZVK8 323 aa8.43□□□□□ -1.06
VRK2-208ENST00000463222 FNBP4Q8N3X1 1017 aaPredicted RBP8.43□□□□□ -1.06
VRK2-208ENST00000463222 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
VRK2-208ENST00000463222 HRCP23327 699 aa8.42□□□□□ -1.06
VRK2-208ENST00000463222 CSPP1Q1MSJ5 1256 aa8.42□□□□□ -1.06
VRK2-208ENST00000463222 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
VRK2-208ENST00000463222 HPS5Q9UPZ3 1129 aa8.42□□□□□ -1.06
VRK2-208ENST00000463222 COG6Q9Y2V7 657 aa8.42□□□□□ -1.06
VRK2-208ENST00000463222 SPDYE5A6NIY4 337 aa8.41□□□□□ -1.06
VRK2-208ENST00000463222 DDX11L8A8MPP1 907 aa8.41□□□□□ -1.06
VRK2-208ENST00000463222 CD46P15529 392 aa8.41□□□□□ -1.06
VRK2-208ENST00000463222 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
VRK2-208ENST00000463222 BANK1Q8NDB2 785 aa8.4□□□□□ -1.06
VRK2-208ENST00000463222 PNMA3Q9UL41 463 aa8.4□□□□□ -1.06
VRK2-208ENST00000463222 SMAPO00193 183 aa8.39□□□□□ -1.07
VRK2-208ENST00000463222 NDUFV2P19404 249 aa8.39□□□□□ -1.07
VRK2-208ENST00000463222 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
VRK2-208ENST00000463222 PPP2R2DQ66LE6 453 aa8.39□□□□□ -1.07
VRK2-208ENST00000463222 TATDN2Q93075 761 aa8.39□□□□□ -1.07
VRK2-208ENST00000463222 MOXD2PA6NHM9 499 aa8.38□□□□□ -1.07
VRK2-208ENST00000463222 SPTLC1O15269 473 aa8.38□□□□□ -1.07
VRK2-208ENST00000463222 DNAJB2P25686 324 aa8.37□□□□□ -1.07
VRK2-208ENST00000463222 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
VRK2-208ENST00000463222 RSBN1LQ6PCB5 846 aaPredicted RBP8.37□□□□□ -1.07
VRK2-208ENST00000463222 ZNF330Q9Y3S2 320 aaPredicted RBP8.37□□□□□ -1.07
VRK2-208ENST00000463222 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
VRK2-208ENST00000463222 QPCTQ16769 361 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms