RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 MED1Q15648 1581 aaPredicted RBP36.83■■■■□ 3.49
TTC3-212ENST00000463216 PPP1R15AO75807 674 aaPredicted RBP36.82■■■■□ 3.48
TTC3-212ENST00000463216 KCNA6P17658 529 aa36.81■■■■□ 3.48
TTC3-212ENST00000463216 RBM33Q96EV2 1170 aaKnown RBP36.79■■■■□ 3.48
TTC3-212ENST00000463216 PROSER2Q86WR7 435 aaPredicted RBP36.78■■■■□ 3.48
TTC3-212ENST00000463216 E9PCH4 1651 aa36.77■■■■□ 3.48
TTC3-212ENST00000463216 TMEM94Q12767 1356 aa36.77■■■■□ 3.48
TTC3-212ENST00000463216 NUP155O75694 1391 aa36.76■■■■□ 3.47
TTC3-212ENST00000463216 HDGFP51858 240 aaKnown RBP36.75■■■■□ 3.47
TTC3-212ENST00000463216 RIMS2Q9UQ26 1411 aa36.75■■■■□ 3.47
TTC3-212ENST00000463216 TMEM131LA2VDJ0 1609 aa36.73■■■■□ 3.47
TTC3-212ENST00000463216 IQGAP3Q86VI3 1631 aa36.73■■■■□ 3.47
TTC3-212ENST00000463216 ZFYVE9O95405 1425 aa36.71■■■■□ 3.47
TTC3-212ENST00000463216 PHF23Q9BUL5 403 aaPredicted RBP36.71■■■■□ 3.47
TTC3-212ENST00000463216 NUTM2DQ5VT03 806 aaPredicted RBP36.7■■■■□ 3.47
TTC3-212ENST00000463216 PLEKHG1Q9ULL1 1385 aa36.68■■■■□ 3.46
TTC3-212ENST00000463216 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.65■■■■□ 3.46
TTC3-212ENST00000463216 NWD1Q149M9 1564 aa36.63■■■■□ 3.45
TTC3-212ENST00000463216 NKTRP30414 1462 aaKnown RBP36.62■■■■□ 3.45
TTC3-212ENST00000463216 FAM135BQ49AJ0 1406 aa36.58■■■■□ 3.45
TTC3-212ENST00000463216 CHD2O14647 1828 aaKnown RBP36.57■■■■□ 3.45
TTC3-212ENST00000463216 MSH6P52701 1360 aa36.57■■■■□ 3.45
TTC3-212ENST00000463216 TBX22Q9Y458 520 aa36.55■■■■□ 3.44
TTC3-212ENST00000463216 ROBO1Q9Y6N7 1651 aa36.53■■■■□ 3.44
TTC3-212ENST00000463216 C14orf37Q86TY3 774 aa36.51■■■■□ 3.44
TTC3-212ENST00000463216 SPHKAPQ2M3C7 1700 aa36.48■■■■□ 3.43
TTC3-212ENST00000463216 ADAMTS13Q76LX8 1427 aa36.48■■■■□ 3.43
TTC3-212ENST00000463216 ZNF326Q5BKZ1 582 aaKnown RBP36.47■■■■□ 3.43
TTC3-212ENST00000463216 RRBP1Q9P2E9 1410 aaKnown RBP36.47■■■■□ 3.43
TTC3-212ENST00000463216 SLAIN2Q9P270 581 aa36.46■■■■□ 3.43
TTC3-212ENST00000463216 DIP2AQ14689 1571 aa36.43■■■■□ 3.42
TTC3-212ENST00000463216 NAIPQ13075 1403 aa36.38■■■■□ 3.41
TTC3-212ENST00000463216 TRPM2O94759 1503 aa36.38■■■■□ 3.41
TTC3-212ENST00000463216 TRIM52Q96A61 297 aa36.37■■■■□ 3.41
TTC3-212ENST00000463216 AMOTL2Q9Y2J4 779 aa36.37■■■■□ 3.41
TTC3-212ENST00000463216 PIK3R4Q99570 1358 aa36.37■■■■□ 3.41
TTC3-212ENST00000463216 PHLPP1O60346 1717 aa36.34■■■■□ 3.41
TTC3-212ENST00000463216 NCOA3Q9Y6Q9 1424 aa36.34■■■■□ 3.41
TTC3-212ENST00000463216 ATF3P18847 181 aa36.32■■■■□ 3.4
TTC3-212ENST00000463216 CLTCL1P53675 1640 aa36.31■■■■□ 3.4
TTC3-212ENST00000463216 PTPRUQ92729 1446 aa36.31■■■■□ 3.4
TTC3-212ENST00000463216 C19orf44Q9H6X5 657 aa36.3■■■■□ 3.4
TTC3-212ENST00000463216 RGS17Q9UGC6 210 aaPredicted RBP36.3■■■■□ 3.4
TTC3-212ENST00000463216 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.29■■■■□ 3.4
TTC3-212ENST00000463216 CADPS2Q86UW7 1296 aa36.29■■■■□ 3.4
TTC3-212ENST00000463216 NRXN3Q9Y4C0 1643 aa36.26■■■■□ 3.4
TTC3-212ENST00000463216 KIF1BO60333 1816 aa36.25■■■■□ 3.39
TTC3-212ENST00000463216 SETBP1Q9Y6X0 1596 aa36.24■■■■□ 3.39
TTC3-212ENST00000463216 HFM1A2PYH4 1435 aa36.23■■■■□ 3.39
TTC3-212ENST00000463216 SLC4A1APQ9BWU0 796 aaKnown RBP36.21■■■■□ 3.39
TTC3-212ENST00000463216 NEXMIFQ5QGS0 1516 aa36.2■■■■□ 3.39
TTC3-212ENST00000463216 METP08581 1390 aa36.2■■■■□ 3.39
TTC3-212ENST00000463216 JCADQ9P266 1359 aa36.2■■■■□ 3.39
TTC3-212ENST00000463216 XRN1Q8IZH2 1706 aaKnown RBP36.17■■■■□ 3.38
TTC3-212ENST00000463216 COL16A1Q07092 1604 aaPredicted RBP36.16■■■■□ 3.38
TTC3-212ENST00000463216 POTEAQ6S8J7 498 aa36.13■■■■□ 3.37
TTC3-212ENST00000463216 BRINP3Q76B58 766 aa36.09■■■■□ 3.37
TTC3-212ENST00000463216 VGFO15240 615 aaPredicted RBP36.08■■■■□ 3.37
TTC3-212ENST00000463216 FOXD1Q16676 465 aa36.08■■■■□ 3.37
TTC3-212ENST00000463216 AHDC1Q5TGY3 1603 aaPredicted RBP36.07■■■■□ 3.36
TTC3-212ENST00000463216 MEX3CQ5U5Q3 659 aaKnown RBP36.06■■■■□ 3.36
TTC3-212ENST00000463216 DCCP43146 1447 aa36.06■■■■□ 3.36
TTC3-212ENST00000463216 SPATA31A6Q5VVP1 1343 aa36.02■■■■□ 3.36
TTC3-212ENST00000463216 RPGRIP1LQ68CZ1 1315 aa36■■■■□ 3.35
TTC3-212ENST00000463216 MST1RQ04912 1400 aa36■■■■□ 3.35
TTC3-212ENST00000463216 ADGRL3Q9HAR2 1447 aa35.99■■■■□ 3.35
TTC3-212ENST00000463216 ASXL1Q8IXJ9 1541 aa35.98■■■■□ 3.35
TTC3-212ENST00000463216 LRP6O75581 1613 aa35.97■■■■□ 3.35
TTC3-212ENST00000463216 NALCNQ8IZF0 1738 aa35.97■■■■□ 3.35
TTC3-212ENST00000463216 NUTM2BA6NNL0 878 aaPredicted RBP35.96■■■■□ 3.35
TTC3-212ENST00000463216 NUTM2EB1AL46 878 aaPredicted RBP35.96■■■■□ 3.35
TTC3-212ENST00000463216 NUTM2AQ8IVF1 878 aaPredicted RBP35.96■■■■□ 3.35
TTC3-212ENST00000463216 SHPRHQ149N8 1683 aa35.95■■■■□ 3.35
TTC3-212ENST00000463216 PPLO60437 1756 aa35.94■■■■□ 3.34
TTC3-212ENST00000463216 SETD1AO15047 1707 aaKnown RBP35.93■■■■□ 3.34
TTC3-212ENST00000463216 RGL3Q3MIN7 710 aa35.92■■■■□ 3.34
TTC3-212ENST00000463216 DDX17Q92841 729 aaKnown RBP35.92■■■■□ 3.34
TTC3-212ENST00000463216 MPHOSPH9Q99550 1183 aa35.9■■■■□ 3.34
TTC3-212ENST00000463216 CCDC144AA2RUR9 1427 aa35.9■■■■□ 3.34
TTC3-212ENST00000463216 ROBO2Q9HCK4 1378 aa35.89■■■■□ 3.34
TTC3-212ENST00000463216 PTCH1Q13635 1447 aa35.88■■■■□ 3.33
TTC3-212ENST00000463216 NHSL1Q5SYE7 1610 aa35.86■■■■□ 3.33
TTC3-212ENST00000463216 LRRC59Q96AG4 307 aaKnown RBP35.85■■■■□ 3.33
TTC3-212ENST00000463216 ZNF772Q68DY9 489 aaPredicted RBP35.84■■■■□ 3.33
TTC3-212ENST00000463216 SETD5Q9C0A6 1442 aa35.83■■■■□ 3.33
TTC3-212ENST00000463216 C1orf167Q5SNV9 1468 aa35.82■■■■□ 3.32
TTC3-212ENST00000463216 ADGRF5Q8IZF2 1346 aa35.82■■■■□ 3.32
TTC3-212ENST00000463216 ORAI2Q96SN7 254 aa35.78■■■■□ 3.32
TTC3-212ENST00000463216 STK26Q9P289 416 aa35.77■■■■□ 3.32
TTC3-212ENST00000463216 SPATA31E1Q6ZUB1 1445 aa35.74■■■■□ 3.31
TTC3-212ENST00000463216 ANKRD30BQ9BXX2 1392 aa35.73■■■■□ 3.31
TTC3-212ENST00000463216 PNPLA6Q8IY17 1366 aa35.72■■■■□ 3.31
TTC3-212ENST00000463216 PRAG1Q86YV5 1406 aa35.72■■■■□ 3.31
TTC3-212ENST00000463216 C8orf37Q96NL8 207 aa35.71■■■■□ 3.31
TTC3-212ENST00000463216 AFF2P51816 1311 aa35.71■■■■□ 3.31
TTC3-212ENST00000463216 IFT172Q9UG01 1749 aa35.69■■■■□ 3.3
TTC3-212ENST00000463216 TMEM132EQ6IEE7 984 aa35.69■■■■□ 3.3
TTC3-212ENST00000463216 RXRBP28702 533 aa35.68■■■■□ 3.3
TTC3-212ENST00000463216 WAPLQ7Z5K2 1190 aa35.67■■■■□ 3.3
TTC3-212ENST00000463216 ESCO1Q5FWF5 840 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms