RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 ADGRB3O60242 1522 aa8.77□□□□□ -1.01
CCR9-205ENST00000463197 FAM135BQ49AJ0 1406 aa8.77□□□□□ -1.01
CCR9-205ENST00000463197 ADAMTS13Q76LX8 1427 aa8.77□□□□□ -1.01
CCR9-205ENST00000463197 RIMS2Q9UQ26 1411 aa8.77□□□□□ -1.01
CCR9-205ENST00000463197 PLEKHG1Q9ULL1 1385 aa8.76□□□□□ -1.01
CCR9-205ENST00000463197 CHGAP10645 457 aaKnown RBP8.76□□□□□ -1.01
CCR9-205ENST00000463197 TBX22Q9Y458 520 aa8.76□□□□□ -1.01
CCR9-205ENST00000463197 RPRD2Q5VT52 1461 aaKnown RBP8.76□□□□□ -1.01
CCR9-205ENST00000463197 TMEM131LA2VDJ0 1609 aa8.76□□□□□ -1.01
CCR9-205ENST00000463197 NUP155O75694 1391 aa8.75□□□□□ -1.01
CCR9-205ENST00000463197 PTPRUQ92729 1446 aa8.75□□□□□ -1.01
CCR9-205ENST00000463197 POTEAQ6S8J7 498 aa8.75□□□□□ -1.01
CCR9-205ENST00000463197 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
CCR9-205ENST00000463197 KDM5AP29375 1690 aaKnown RBP8.75□□□□□ -1.01
CCR9-205ENST00000463197 BCANQ96GW7 911 aa8.74□□□□□ -1.01
CCR9-205ENST00000463197 UNC13BO14795 1591 aa8.73□□□□□ -1.01
CCR9-205ENST00000463197 E9PCH4 1651 aa8.73□□□□□ -1.01
CCR9-205ENST00000463197 NWD1Q149M9 1564 aa8.73□□□□□ -1.01
CCR9-205ENST00000463197 AMOTL2Q9Y2J4 779 aa8.72□□□□□ -1.01
CCR9-205ENST00000463197 METP08581 1390 aa8.71□□□□□ -1.02
CCR9-205ENST00000463197 MYO5BQ9ULV0 1848 aa8.7□□□□□ -1.02
CCR9-205ENST00000463197 IQGAP3Q86VI3 1631 aa8.7□□□□□ -1.02
CCR9-205ENST00000463197 PPP1R15AO75807 674 aaPredicted RBP8.7□□□□□ -1.02
CCR9-205ENST00000463197 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCR9-205ENST00000463197 PHF23Q9BUL5 403 aaPredicted RBP8.7□□□□□ -1.02
CCR9-205ENST00000463197 NAIPQ13075 1403 aa8.7□□□□□ -1.02
CCR9-205ENST00000463197 RRBP1Q9P2E9 1410 aaKnown RBP8.7□□□□□ -1.02
CCR9-205ENST00000463197 NKTRP30414 1462 aaKnown RBP8.7□□□□□ -1.02
CCR9-205ENST00000463197 GCC2Q8IWJ2 1684 aa8.69□□□□□ -1.02
CCR9-205ENST00000463197 ROBO1Q9Y6N7 1651 aa8.69□□□□□ -1.02
CCR9-205ENST00000463197 HDGFP51858 240 aaKnown RBP8.69□□□□□ -1.02
CCR9-205ENST00000463197 C19orf44Q9H6X5 657 aa8.68□□□□□ -1.02
CCR9-205ENST00000463197 MSH6P52701 1360 aa8.68□□□□□ -1.02
CCR9-205ENST00000463197 CHD2O14647 1828 aaKnown RBP8.68□□□□□ -1.02
CCR9-205ENST00000463197 FOXD1Q16676 465 aa8.67□□□□□ -1.02
CCR9-205ENST00000463197 BRINP3Q76B58 766 aa8.67□□□□□ -1.02
CCR9-205ENST00000463197 DDX17Q92841 729 aaKnown RBP8.67□□□□□ -1.02
CCR9-205ENST00000463197 NCOA3Q9Y6Q9 1424 aa8.67□□□□□ -1.02
CCR9-205ENST00000463197 NRXN3Q9Y4C0 1643 aa8.66□□□□□ -1.02
CCR9-205ENST00000463197 PIK3R4Q99570 1358 aa8.66□□□□□ -1.02
CCR9-205ENST00000463197 LRP6O75581 1613 aa8.65□□□□□ -1.02
CCR9-205ENST00000463197 ZNF326Q5BKZ1 582 aaKnown RBP8.65□□□□□ -1.02
CCR9-205ENST00000463197 JCADQ9P266 1359 aa8.64□□□□□ -1.03
CCR9-205ENST00000463197 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
CCR9-205ENST00000463197 CADPS2Q86UW7 1296 aa8.64□□□□□ -1.03
CCR9-205ENST00000463197 CLTCL1P53675 1640 aa8.64□□□□□ -1.03
CCR9-205ENST00000463197 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.63□□□□□ -1.03
CCR9-205ENST00000463197 COL16A1Q07092 1604 aaPredicted RBP8.63□□□□□ -1.03
CCR9-205ENST00000463197 ATF3P18847 181 aa8.63□□□□□ -1.03
CCR9-205ENST00000463197 SETBP1Q9Y6X0 1596 aa8.63□□□□□ -1.03
CCR9-205ENST00000463197 NEXMIFQ5QGS0 1516 aa8.63□□□□□ -1.03
CCR9-205ENST00000463197 MST1RQ04912 1400 aa8.63□□□□□ -1.03
CCR9-205ENST00000463197 ROBO2Q9HCK4 1378 aa8.62□□□□□ -1.03
CCR9-205ENST00000463197 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
CCR9-205ENST00000463197 DIP2AQ14689 1571 aa8.61□□□□□ -1.03
CCR9-205ENST00000463197 ADGRF5Q8IZF2 1346 aa8.61□□□□□ -1.03
CCR9-205ENST00000463197 TRPM2O94759 1503 aa8.61□□□□□ -1.03
CCR9-205ENST00000463197 ORAI2Q96SN7 254 aa8.61□□□□□ -1.03
CCR9-205ENST00000463197 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
CCR9-205ENST00000463197 HFM1A2PYH4 1435 aa8.61□□□□□ -1.03
CCR9-205ENST00000463197 PHLPP1O60346 1717 aa8.6□□□□□ -1.03
CCR9-205ENST00000463197 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
CCR9-205ENST00000463197 NUTM2BA6NNL0 878 aaPredicted RBP8.6□□□□□ -1.03
CCR9-205ENST00000463197 NUTM2EB1AL46 878 aaPredicted RBP8.6□□□□□ -1.03
CCR9-205ENST00000463197 NUTM2AQ8IVF1 878 aaPredicted RBP8.6□□□□□ -1.03
CCR9-205ENST00000463197 AHDC1Q5TGY3 1603 aaPredicted RBP8.6□□□□□ -1.03
CCR9-205ENST00000463197 SPHKAPQ2M3C7 1700 aa8.6□□□□□ -1.03
CCR9-205ENST00000463197 SPATA31A6Q5VVP1 1343 aa8.59□□□□□ -1.03
CCR9-205ENST00000463197 VGFO15240 615 aaPredicted RBP8.59□□□□□ -1.03
CCR9-205ENST00000463197 MPHOSPH9Q99550 1183 aa8.59□□□□□ -1.03
CCR9-205ENST00000463197 SETD5Q9C0A6 1442 aa8.58□□□□□ -1.04
CCR9-205ENST00000463197 RGL3Q3MIN7 710 aa8.58□□□□□ -1.04
CCR9-205ENST00000463197 ASXL1Q8IXJ9 1541 aa8.58□□□□□ -1.04
CCR9-205ENST00000463197 C1orf167Q5SNV9 1468 aa8.57□□□□□ -1.04
CCR9-205ENST00000463197 DCCP43146 1447 aa8.57□□□□□ -1.04
CCR9-205ENST00000463197 ADGRL3Q9HAR2 1447 aa8.57□□□□□ -1.04
CCR9-205ENST00000463197 TMEM132EQ6IEE7 984 aa8.57□□□□□ -1.04
CCR9-205ENST00000463197 WAPLQ7Z5K2 1190 aa8.57□□□□□ -1.04
CCR9-205ENST00000463197 RPGRIP1LQ68CZ1 1315 aa8.56□□□□□ -1.04
CCR9-205ENST00000463197 SPATA31E1Q6ZUB1 1445 aa8.56□□□□□ -1.04
CCR9-205ENST00000463197 UPF1Q92900 1129 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCR9-205ENST00000463197 LRRC59Q96AG4 307 aaKnown RBP8.56□□□□□ -1.04
CCR9-205ENST00000463197 SETD1AO15047 1707 aaKnown RBP8.56□□□□□ -1.04
CCR9-205ENST00000463197 PNPLA6Q8IY17 1366 aa8.56□□□□□ -1.04
CCR9-205ENST00000463197 PLEKHH1Q9ULM0 1364 aa8.56□□□□□ -1.04
CCR9-205ENST00000463197 SOS2Q07890 1332 aaPredicted RBP8.55□□□□□ -1.04
CCR9-205ENST00000463197 AFF2P51816 1311 aa8.54□□□□□ -1.04
CCR9-205ENST00000463197 MEX3CQ5U5Q3 659 aaKnown RBP8.54□□□□□ -1.04
CCR9-205ENST00000463197 ZNF772Q68DY9 489 aaPredicted RBP8.54□□□□□ -1.04
CCR9-205ENST00000463197 STK26Q9P289 416 aa8.54□□□□□ -1.04
CCR9-205ENST00000463197 NALCNQ8IZF0 1738 aa8.54□□□□□ -1.04
CCR9-205ENST00000463197 PTCH1Q13635 1447 aa8.54□□□□□ -1.04
CCR9-205ENST00000463197 PRAG1Q86YV5 1406 aa8.54□□□□□ -1.04
CCR9-205ENST00000463197 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
CCR9-205ENST00000463197 ADAMTS2O95450 1211 aa8.53□□□□□ -1.04
CCR9-205ENST00000463197 RXRBP28702 533 aa8.53□□□□□ -1.04
CCR9-205ENST00000463197 XPCQ01831 940 aaPredicted RBP8.53□□□□□ -1.04
CCR9-205ENST00000463197 C8orf37Q96NL8 207 aa8.53□□□□□ -1.04
CCR9-205ENST00000463197 QTRT2Q9H974 415 aaKnown RBP8.53□□□□□ -1.04
CCR9-205ENST00000463197 NHSL1Q5SYE7 1610 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms