RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 HFM1A2PYH4 1435 aa29.88■■■□□ 2.37
MSH5-210ENST00000463094 LRRC7Q96NW7 1537 aa29.87■■■□□ 2.37
MSH5-210ENST00000463094 TMEM131LA2VDJ0 1609 aa29.86■■■□□ 2.37
MSH5-210ENST00000463094 SENP3Q9H4L4 574 aaPredicted RBP29.85■■■□□ 2.37
MSH5-210ENST00000463094 ZFYVE9O95405 1425 aa29.83■■■□□ 2.37
MSH5-210ENST00000463094 PLEKHG1Q9ULL1 1385 aa29.83■■■□□ 2.37
MSH5-210ENST00000463094 KCNA6P17658 529 aa29.83■■■□□ 2.37
MSH5-210ENST00000463094 STRCP1A6NGW2 1772 aa29.82■■■□□ 2.36
MSH5-210ENST00000463094 ZNF326Q5BKZ1 582 aaKnown RBP29.8■■■□□ 2.36
MSH5-210ENST00000463094 MYO5BQ9ULV0 1848 aa29.79■■■□□ 2.36
MSH5-210ENST00000463094 PROSER2Q86WR7 435 aaPredicted RBP29.78■■■□□ 2.36
MSH5-210ENST00000463094 SPHKAPQ2M3C7 1700 aa29.78■■■□□ 2.36
MSH5-210ENST00000463094 NUTM2DQ5VT03 806 aaPredicted RBP29.77■■■□□ 2.36
MSH5-210ENST00000463094 SLC4A1APQ9BWU0 796 aaKnown RBP29.77■■■□□ 2.36
MSH5-210ENST00000463094 DISP3Q9P2K9 1392 aa29.75■■■□□ 2.35
MSH5-210ENST00000463094 TBX22Q9Y458 520 aa29.73■■■□□ 2.35
MSH5-210ENST00000463094 TMEM94Q12767 1356 aa29.72■■■□□ 2.35
MSH5-210ENST00000463094 HSPA1LP34931 641 aa29.71■■■□□ 2.35
MSH5-210ENST00000463094 NKTRP30414 1462 aaKnown RBP29.71■■■□□ 2.35
MSH5-210ENST00000463094 TRPM2O94759 1503 aa29.69■■■□□ 2.34
MSH5-210ENST00000463094 ACIN1Q9UKV3 1341 aaKnown RBP29.67■■■□□ 2.34
MSH5-210ENST00000463094 DIP2AQ14689 1571 aa29.65■■■□□ 2.34
MSH5-210ENST00000463094 NWD1Q149M9 1564 aa29.65■■■□□ 2.34
MSH5-210ENST00000463094 C14orf37Q86TY3 774 aa29.64■■■□□ 2.34
MSH5-210ENST00000463094 MSH6P52701 1360 aa29.64■■■□□ 2.33
MSH5-210ENST00000463094 RBM33Q96EV2 1170 aaKnown RBP29.63■■■□□ 2.33
MSH5-210ENST00000463094 PIK3R4Q99570 1358 aa29.63■■■□□ 2.33
MSH5-210ENST00000463094 CLTCL1P53675 1640 aa29.62■■■□□ 2.33
MSH5-210ENST00000463094 ADAMTS13Q76LX8 1427 aa29.6■■■□□ 2.33
MSH5-210ENST00000463094 ALKQ9UM73 1620 aa29.6■■■□□ 2.33
MSH5-210ENST00000463094 KIF1BO60333 1816 aa29.57■■■□□ 2.32
MSH5-210ENST00000463094 XIRP1Q702N8 1843 aaKnown RBP29.57■■■□□ 2.32
MSH5-210ENST00000463094 CHD2O14647 1828 aaKnown RBP29.56■■■□□ 2.32
MSH5-210ENST00000463094 VGFO15240 615 aaPredicted RBP29.55■■■□□ 2.32
MSH5-210ENST00000463094 MPHOSPH9Q99550 1183 aa29.54■■■□□ 2.32
MSH5-210ENST00000463094 AMOTL2Q9Y2J4 779 aa29.54■■■□□ 2.32
MSH5-210ENST00000463094 SETD5Q9C0A6 1442 aa29.54■■■□□ 2.32
MSH5-210ENST00000463094 FOXD1Q16676 465 aa29.52■■■□□ 2.32
MSH5-210ENST00000463094 NCOA3Q9Y6Q9 1424 aa29.52■■■□□ 2.32
MSH5-210ENST00000463094 SETBP1Q9Y6X0 1596 aa29.52■■■□□ 2.32
MSH5-210ENST00000463094 RPGRIP1LQ68CZ1 1315 aa29.51■■■□□ 2.32
MSH5-210ENST00000463094 CCDC144AA2RUR9 1427 aa29.51■■■□□ 2.31
MSH5-210ENST00000463094 FAM135BQ49AJ0 1406 aa29.5■■■□□ 2.31
MSH5-210ENST00000463094 NEXMIFQ5QGS0 1516 aa29.5■■■□□ 2.31
MSH5-210ENST00000463094 ATF3P18847 181 aa29.47■■■□□ 2.31
MSH5-210ENST00000463094 SLAIN2Q9P270 581 aa29.47■■■□□ 2.31
MSH5-210ENST00000463094 CADPS2Q86UW7 1296 aa29.45■■■□□ 2.31
MSH5-210ENST00000463094 C19orf44Q9H6X5 657 aa29.45■■■□□ 2.31
MSH5-210ENST00000463094 PHF23Q9BUL5 403 aaPredicted RBP29.42■■■□□ 2.3
MSH5-210ENST00000463094 NRXN3Q9Y4C0 1643 aa29.42■■■□□ 2.3
MSH5-210ENST00000463094 METP08581 1390 aa29.41■■■□□ 2.3
MSH5-210ENST00000463094 PTPRUQ92729 1446 aa29.41■■■□□ 2.3
MSH5-210ENST00000463094 RGL3Q3MIN7 710 aa29.4■■■□□ 2.3
MSH5-210ENST00000463094 RAB3GAP2Q9H2M9 1393 aa29.39■■■□□ 2.3
MSH5-210ENST00000463094 ROBO1Q9Y6N7 1651 aa29.39■■■□□ 2.3
MSH5-210ENST00000463094 MED1Q15648 1581 aaPredicted RBP29.39■■■□□ 2.29
MSH5-210ENST00000463094 ILDR2Q71H61 639 aa29.34■■■□□ 2.29
MSH5-210ENST00000463094 XRN1Q8IZH2 1706 aaKnown RBP29.34■■■□□ 2.29
MSH5-210ENST00000463094 ANKRD30BQ9BXX2 1392 aa29.32■■■□□ 2.28
MSH5-210ENST00000463094 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.31■■■□□ 2.28
MSH5-210ENST00000463094 DCCP43146 1447 aa29.3■■■□□ 2.28
MSH5-210ENST00000463094 PPLO60437 1756 aa29.3■■■□□ 2.28
MSH5-210ENST00000463094 SPATA31E1Q6ZUB1 1445 aa29.27■■■□□ 2.28
MSH5-210ENST00000463094 PHLPP1O60346 1717 aa29.24■■■□□ 2.27
MSH5-210ENST00000463094 ADGRL3Q9HAR2 1447 aa29.24■■■□□ 2.27
MSH5-210ENST00000463094 ADGRF5Q8IZF2 1346 aa29.23■■■□□ 2.27
MSH5-210ENST00000463094 PTCH1Q13635 1447 aa29.23■■■□□ 2.27
MSH5-210ENST00000463094 HRCP23327 699 aa29.22■■■□□ 2.27
MSH5-210ENST00000463094 JCADQ9P266 1359 aa29.2■■■□□ 2.26
MSH5-210ENST00000463094 SOCS7O14512 581 aa29.19■■■□□ 2.26
MSH5-210ENST00000463094 BRINP3Q76B58 766 aa29.18■■■□□ 2.26
MSH5-210ENST00000463094 ROBO2Q9HCK4 1378 aa29.17■■■□□ 2.26
MSH5-210ENST00000463094 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
MSH5-210ENST00000463094 STK26Q9P289 416 aa29.16■■■□□ 2.26
MSH5-210ENST00000463094 MST1RQ04912 1400 aa29.15■■■□□ 2.26
MSH5-210ENST00000463094 PRAG1Q86YV5 1406 aa29.13■■■□□ 2.25
MSH5-210ENST00000463094 IFT172Q9UG01 1749 aa29.13■■■□□ 2.25
MSH5-210ENST00000463094 PIK3C2GO75747 1445 aa29.12■■■□□ 2.25
MSH5-210ENST00000463094 AHDC1Q5TGY3 1603 aaPredicted RBP29.12■■■□□ 2.25
MSH5-210ENST00000463094 NALCNQ8IZF0 1738 aa29.11■■■□□ 2.25
MSH5-210ENST00000463094 ASXL1Q8IXJ9 1541 aa29.1■■■□□ 2.25
MSH5-210ENST00000463094 COL16A1Q07092 1604 aaPredicted RBP29.09■■■□□ 2.25
MSH5-210ENST00000463094 TMEM132EQ6IEE7 984 aa29.09■■■□□ 2.25
MSH5-210ENST00000463094 LRPPRCP42704 1394 aaKnown RBP29.09■■■□□ 2.25
MSH5-210ENST00000463094 SPATA31A6Q5VVP1 1343 aa29.08■■■□□ 2.25
MSH5-210ENST00000463094 MYOM2P54296 1465 aa29.07■■■□□ 2.24
MSH5-210ENST00000463094 MEX3CQ5U5Q3 659 aaKnown RBP29.07■■■□□ 2.24
MSH5-210ENST00000463094 C14orf93Q9H972 538 aaKnown RBP29.05■■■□□ 2.24
MSH5-210ENST00000463094 C1orf167Q5SNV9 1468 aa29.04■■■□□ 2.24
MSH5-210ENST00000463094 DHX57Q6P158 1386 aaKnown RBP29.04■■■□□ 2.24
MSH5-210ENST00000463094 ABCC11Q96J66 1382 aa29.04■■■□□ 2.24
MSH5-210ENST00000463094 LRRC59Q96AG4 307 aaKnown RBP29.04■■■□□ 2.24
MSH5-210ENST00000463094 TECPR2O15040 1411 aa29.03■■■□□ 2.24
MSH5-210ENST00000463094 YTHDC2Q9H6S0 1430 aaKnown RBP29.03■■■□□ 2.24
MSH5-210ENST00000463094 LAMC1P11047 1609 aa29.02■■■□□ 2.24
MSH5-210ENST00000463094 CFAP70Q5T0N1 1121 aa29.01■■■□□ 2.23
MSH5-210ENST00000463094 WAPLQ7Z5K2 1190 aa29.01■■■□□ 2.23
MSH5-210ENST00000463094 DCAF11Q8TEB1 546 aa29.01■■■□□ 2.23
MSH5-210ENST00000463094 STAC3Q96MF2 364 aa29.01■■■□□ 2.23
MSH5-210ENST00000463094 KDM2AQ9Y2K7 1162 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms