RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 BCL2L13Q9BXK5 485 aa10.25□□□□□ -0.77
ERCC8-204ENST00000462279 CHMP5Q9NZZ3 219 aa10.25□□□□□ -0.77
ERCC8-204ENST00000462279 GAPVD1Q14C86 1478 aa10.25□□□□□ -0.77
ERCC8-204ENST00000462279 DMRT2Q9Y5R5 561 aa10.24□□□□□ -0.77
ERCC8-204ENST00000462279 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
ERCC8-204ENST00000462279 KIAA1211Q6ZU35 1233 aa10.24□□□□□ -0.77
ERCC8-204ENST00000462279 ADGRL2O95490 1459 aa10.24□□□□□ -0.77
ERCC8-204ENST00000462279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.23□□□□□ -0.77
ERCC8-204ENST00000462279 PDZRN3Q9UPQ7 1066 aa10.23□□□□□ -0.77
ERCC8-204ENST00000462279 ZNF521Q96K83 1311 aa10.23□□□□□ -0.77
ERCC8-204ENST00000462279 CENPJQ9HC77 1338 aaPredicted RBP10.23□□□□□ -0.77
ERCC8-204ENST00000462279 TESK2Q96S53 571 aa10.23□□□□□ -0.77
ERCC8-204ENST00000462279 C22orf23Q9BZE7 217 aa10.22□□□□□ -0.77
ERCC8-204ENST00000462279 TNNQ9UQP3 1299 aa10.22□□□□□ -0.77
ERCC8-204ENST00000462279 RAPGEF6Q8TEU7 1601 aa10.22□□□□□ -0.77
ERCC8-204ENST00000462279 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 PCDHB15Q9Y5E8 787 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 DISP1Q96F81 1524 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 ZNF608Q9ULD9 1512 aaPredicted RBP10.21□□□□□ -0.77
ERCC8-204ENST00000462279 E9PSI1 815 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 TSPY4P0CV99 314 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 TSPY10P0CW01 314 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 GAS2L3Q86XJ1 694 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 HSCBQ8IWL3 235 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 PDCL3Q9H2J4 239 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 FAM13BQ9NYF5 915 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 NKTRP30414 1462 aaKnown RBP10.21□□□□□ -0.77
ERCC8-204ENST00000462279 CAMSAP2Q08AD1 1489 aa10.21□□□□□ -0.77
ERCC8-204ENST00000462279 A0A0U1RQG5 324 aaPredicted RBP10.21□□□□□ -0.78
ERCC8-204ENST00000462279 PRG4Q92954 1404 aaPredicted RBP10.21□□□□□ -0.78
ERCC8-204ENST00000462279 MYO5CQ9NQX4 1742 aa10.21□□□□□ -0.78
ERCC8-204ENST00000462279 VIRMAQ69YN4 1812 aaKnown RBP10.21□□□□□ -0.78
ERCC8-204ENST00000462279 NLRP1Q9C000 1473 aa10.2□□□□□ -0.78
ERCC8-204ENST00000462279 DDX11L8A8MPP1 907 aa10.2□□□□□ -0.78
ERCC8-204ENST00000462279 PDE3AQ14432 1141 aa10.2□□□□□ -0.78
ERCC8-204ENST00000462279 TPM2P07951 284 aa10.2□□□□□ -0.78
ERCC8-204ENST00000462279 PMFBP1Q8TBY8 1022 aa10.2□□□□□ -0.78
ERCC8-204ENST00000462279 RRP7AQ9Y3A4 280 aaKnown RBP10.2□□□□□ -0.78
ERCC8-204ENST00000462279 TRPM1Q7Z4N2 1603 aa10.19□□□□□ -0.78
ERCC8-204ENST00000462279 AEBP2Q6ZN18 517 aaPredicted RBP10.19□□□□□ -0.78
ERCC8-204ENST00000462279 ERBINQ96RT1 1412 aa10.19□□□□□ -0.78
ERCC8-204ENST00000462279 ARHGEF12Q9NZN5 1544 aa10.19□□□□□ -0.78
ERCC8-204ENST00000462279 RLBP1P12271 317 aa10.19□□□□□ -0.78
ERCC8-204ENST00000462279 INSRP06213 1382 aa10.18□□□□□ -0.78
ERCC8-204ENST00000462279 TRMT2AQ8IZ69 625 aaKnown RBP10.18□□□□□ -0.78
ERCC8-204ENST00000462279 ANP32BQ92688 251 aaKnown RBP10.18□□□□□ -0.78
ERCC8-204ENST00000462279 CCDC144AA2RUR9 1427 aa10.18□□□□□ -0.78
ERCC8-204ENST00000462279 COL17A1Q9UMD9 1497 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-204ENST00000462279 MSNP26038 577 aaKnown RBP10.17□□□□□ -0.78
ERCC8-204ENST00000462279 RNF17Q9BXT8 1623 aaKnown RBP10.17□□□□□ -0.78
ERCC8-204ENST00000462279 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
ERCC8-204ENST00000462279 HSP90AB1P08238 724 aaKnown RBP10.17□□□□□ -0.78
ERCC8-204ENST00000462279 HNRNPMP52272 730 aaKnown RBP eCLIP10.17□□□□□ -0.78
ERCC8-204ENST00000462279 AMER1Q5JTC6 1135 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-204ENST00000462279 TNPO1Q92973 898 aaKnown RBP10.17□□□□□ -0.78
ERCC8-204ENST00000462279 RWDD1Q9H446 243 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-204ENST00000462279 R3HCC1Q9Y3T6 440 aaKnown RBP10.16□□□□□ -0.78
ERCC8-204ENST00000462279 TNNT2P45379 298 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-204ENST00000462279 NUP153P49790 1475 aaKnown RBP10.16□□□□□ -0.78
ERCC8-204ENST00000462279 NASPP49321 788 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-204ENST00000462279 GBP4Q96PP9 640 aa10.15□□□□□ -0.78
ERCC8-204ENST00000462279 PDS5BQ9NTI5 1447 aa10.15□□□□□ -0.78
ERCC8-204ENST00000462279 ZBTB7CA1YPR0 619 aa10.14□□□□□ -0.79
ERCC8-204ENST00000462279 NCLP19338 710 aaKnown RBP10.14□□□□□ -0.79
ERCC8-204ENST00000462279 WWC1Q8IX03 1113 aa10.14□□□□□ -0.79
ERCC8-204ENST00000462279 ZSCAN30Q86W11 494 aa10.14□□□□□ -0.79
ERCC8-204ENST00000462279 FTSJ3Q8IY81 847 aaKnown RBP10.14□□□□□ -0.79
ERCC8-204ENST00000462279 MAGI2Q86UL8 1455 aa10.14□□□□□ -0.79
ERCC8-204ENST00000462279 ISY1Q9ULR0 285 aaKnown RBP10.13□□□□□ -0.79
ERCC8-204ENST00000462279 RIMBP3CA6NJZ7 1639 aa10.13□□□□□ -0.79
ERCC8-204ENST00000462279 RIMBP3BA6NNM3 1639 aa10.13□□□□□ -0.79
ERCC8-204ENST00000462279 RIMBP3Q9UFD9 1639 aa10.13□□□□□ -0.79
ERCC8-204ENST00000462279 GPATCH8Q9UKJ3 1502 aaKnown RBP10.13□□□□□ -0.79
ERCC8-204ENST00000462279 RARSP54136 660 aaKnown RBP10.13□□□□□ -0.79
ERCC8-204ENST00000462279 C9orf84Q5VXU9 1444 aa10.13□□□□□ -0.79
ERCC8-204ENST00000462279 ABCA8O94911 1581 aa10.13□□□□□ -0.79
ERCC8-204ENST00000462279 UNC13BO14795 1591 aa10.12□□□□□ -0.79
ERCC8-204ENST00000462279 CALD1Q05682 793 aaKnown RBP10.12□□□□□ -0.79
ERCC8-204ENST00000462279 PRDM10Q9NQV6 1147 aa10.12□□□□□ -0.79
ERCC8-204ENST00000462279 PTPRGP23470 1445 aa10.12□□□□□ -0.79
ERCC8-204ENST00000462279 RIPK4P57078 832 aa10.12□□□□□ -0.79
ERCC8-204ENST00000462279 CCDC173Q0VFZ6 552 aa10.12□□□□□ -0.79
ERCC8-204ENST00000462279 DDX49Q9Y6V7 483 aaKnown RBP10.12□□□□□ -0.79
ERCC8-204ENST00000462279 SHANK2Q9UPX8 1470 aa10.12□□□□□ -0.79
ERCC8-204ENST00000462279 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-204ENST00000462279 ZNF692Q9BU19 519 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-204ENST00000462279 TROQ12816 1431 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-204ENST00000462279 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
ERCC8-204ENST00000462279 OFD1O75665 1012 aa10.11□□□□□ -0.79
ERCC8-204ENST00000462279 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-204ENST00000462279 ARHGEF5Q12774 1597 aa10.1□□□□□ -0.79
ERCC8-204ENST00000462279 SKOR2Q2VWA4 1001 aaPredicted RBP10.1□□□□□ -0.79
ERCC8-204ENST00000462279 PRDM4Q9UKN5 801 aa10.1□□□□□ -0.79
ERCC8-204ENST00000462279 ZHX1Q9UKY1 873 aaPredicted RBP10.1□□□□□ -0.79
ERCC8-204ENST00000462279 ABCC10Q5T3U5 1492 aa10.1□□□□□ -0.79
ERCC8-204ENST00000462279 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
ERCC8-204ENST00000462279 EIF4G3O43432 1585 aaKnown RBP10.09□□□□□ -0.79
ERCC8-204ENST00000462279 MAST1Q9Y2H9 1570 aa10.09□□□□□ -0.79
ERCC8-204ENST00000462279 UQCRHLA0A096LP55 91 aa10.09□□□□□ -0.79
ERCC8-204ENST00000462279 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms