RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
CALD1-213ENST00000462181 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
CALD1-213ENST00000462181 SLC4A3P48751 1232 aa12.49□□□□□ -0.41
CALD1-213ENST00000462181 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
CALD1-213ENST00000462181 GPCPD1Q9NPB8 672 aa12.48□□□□□ -0.41
CALD1-213ENST00000462181 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.48□□□□□ -0.41
CALD1-213ENST00000462181 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
CALD1-213ENST00000462181 SOWAHBA6NEL2 793 aa12.45□□□□□ -0.42
CALD1-213ENST00000462181 RNF40O75150 1001 aa12.45□□□□□ -0.42
CALD1-213ENST00000462181 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
CALD1-213ENST00000462181 PARP9Q8IXQ6 854 aa12.44□□□□□ -0.42
CALD1-213ENST00000462181 BCAMP50895 628 aa12.43□□□□□ -0.42
CALD1-213ENST00000462181 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
CALD1-213ENST00000462181 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
CALD1-213ENST00000462181 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
CALD1-213ENST00000462181 RSPH4AQ5TD94 716 aa12.42□□□□□ -0.42
CALD1-213ENST00000462181 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
CALD1-213ENST00000462181 SULF1Q8IWU6 871 aa12.42□□□□□ -0.42
CALD1-213ENST00000462181 TMUB1Q9BVT8 246 aa12.42□□□□□ -0.42
CALD1-213ENST00000462181 THSD4Q6ZMP0 1018 aa12.41□□□□□ -0.42
CALD1-213ENST00000462181 RNF166Q96A37 237 aaPredicted RBP12.41□□□□□ -0.42
CALD1-213ENST00000462181 SSTR3P32745 418 aaPredicted RBP12.39□□□□□ -0.43
CALD1-213ENST00000462181 PPP4CP60510 307 aa12.39□□□□□ -0.43
CALD1-213ENST00000462181 RDH13Q8NBN7 331 aa12.39□□□□□ -0.43
CALD1-213ENST00000462181 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
CALD1-213ENST00000462181 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
CALD1-213ENST00000462181 FAM217BQ9NTX9 383 aaPredicted RBP12.39□□□□□ -0.43
CALD1-213ENST00000462181 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
CALD1-213ENST00000462181 TSR3Q9UJK0 312 aaKnown RBP12.38□□□□□ -0.43
CALD1-213ENST00000462181 PTPN5P54829 565 aa12.37□□□□□ -0.43
CALD1-213ENST00000462181 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
CALD1-213ENST00000462181 MMRN1Q13201 1228 aa12.37□□□□□ -0.43
CALD1-213ENST00000462181 KDM4CQ9H3R0 1056 aa12.36□□□□□ -0.43
CALD1-213ENST00000462181 SLC10A3P09131 477 aa12.35□□□□□ -0.43
CALD1-213ENST00000462181 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
CALD1-213ENST00000462181 MS4A1P11836 297 aa12.33□□□□□ -0.44
CALD1-213ENST00000462181 CD46P15529 392 aa12.33□□□□□ -0.44
CALD1-213ENST00000462181 CFHP08603 1231 aa12.3□□□□□ -0.44
CALD1-213ENST00000462181 KMT5BQ4FZB7 885 aa12.3□□□□□ -0.44
CALD1-213ENST00000462181 BEGAINQ9BUH8 593 aa12.3□□□□□ -0.44
CALD1-213ENST00000462181 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
CALD1-213ENST00000462181 PRR14Q9BWN1 585 aa12.29□□□□□ -0.44
CALD1-213ENST00000462181 GCGRP47871 477 aa12.28□□□□□ -0.44
CALD1-213ENST00000462181 NYAP1Q6ZVC0 841 aa12.28□□□□□ -0.44
CALD1-213ENST00000462181 DDRGK1Q96HY6 314 aa12.26□□□□□ -0.45
CALD1-213ENST00000462181 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
CALD1-213ENST00000462181 APLP1P51693 650 aa12.25□□□□□ -0.45
CALD1-213ENST00000462181 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
CALD1-213ENST00000462181 ACTN4O43707 911 aaKnown RBP12.23□□□□□ -0.45
CALD1-213ENST00000462181 KDM4AO75164 1064 aa12.23□□□□□ -0.45
CALD1-213ENST00000462181 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
CALD1-213ENST00000462181 DIXDC1Q155Q3 683 aa12.21□□□□□ -0.45
CALD1-213ENST00000462181 USP46P62068 366 aa12.2□□□□□ -0.46
CALD1-213ENST00000462181 FUT2Q10981 343 aa12.2□□□□□ -0.46
CALD1-213ENST00000462181 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
CALD1-213ENST00000462181 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
CALD1-213ENST00000462181 PCDHB3Q9Y5E6 796 aa12.2□□□□□ -0.46
CALD1-213ENST00000462181 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
CALD1-213ENST00000462181 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
CALD1-213ENST00000462181 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
CALD1-213ENST00000462181 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
CALD1-213ENST00000462181 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
CALD1-213ENST00000462181 PUS10Q3MIT2 529 aaKnown RBP12.16□□□□□ -0.46
CALD1-213ENST00000462181 HOXA2O43364 376 aa12.14□□□□□ -0.47
CALD1-213ENST00000462181 COPS2P61201 443 aa12.13□□□□□ -0.47
CALD1-213ENST00000462181 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
CALD1-213ENST00000462181 MORN1Q5T089 497 aa12.12□□□□□ -0.47
CALD1-213ENST00000462181 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
CALD1-213ENST00000462181 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
CALD1-213ENST00000462181 MTRQ99707 1265 aa12.12□□□□□ -0.47
CALD1-213ENST00000462181 NR1I2O75469 434 aa12.11□□□□□ -0.47
CALD1-213ENST00000462181 NDUFV2P19404 249 aa12.11□□□□□ -0.47
CALD1-213ENST00000462181 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
CALD1-213ENST00000462181 SCUBE3Q8IX30 993 aa12.1□□□□□ -0.47
CALD1-213ENST00000462181 IL21Q9HBE4 155 aa12.1□□□□□ -0.47
CALD1-213ENST00000462181 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
CALD1-213ENST00000462181 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
CALD1-213ENST00000462181 FDX1P10109 184 aa12.09□□□□□ -0.47
CALD1-213ENST00000462181 SH3D19Q5HYK7 790 aa12.09□□□□□ -0.47
CALD1-213ENST00000462181 TJAP1Q5JTD0 557 aa12.09□□□□□ -0.47
CALD1-213ENST00000462181 HLA-CQ95604 372 aa12.09□□□□□ -0.47
CALD1-213ENST00000462181 SLC27A5Q9Y2P5 690 aa12.09□□□□□ -0.47
CALD1-213ENST00000462181 GUCA2AQ02747 115 aa12.08□□□□□ -0.48
CALD1-213ENST00000462181 SKIV2LQ15477 1246 aaKnown RBP12.08□□□□□ -0.48
CALD1-213ENST00000462181 SPTLC1O15269 473 aa12.07□□□□□ -0.48
CALD1-213ENST00000462181 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
CALD1-213ENST00000462181 ZPR1O75312 459 aa12.06□□□□□ -0.48
CALD1-213ENST00000462181 GJA5P36382 358 aa12.06□□□□□ -0.48
CALD1-213ENST00000462181 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
CALD1-213ENST00000462181 GOPCQ9HD26 462 aa12.06□□□□□ -0.48
CALD1-213ENST00000462181 KCNC4Q03721 635 aa12.05□□□□□ -0.48
CALD1-213ENST00000462181 Q3C1V9 767 aa12.05□□□□□ -0.48
CALD1-213ENST00000462181 ZNF516Q92618 1163 aa12.05□□□□□ -0.48
CALD1-213ENST00000462181 LIMD1Q9UGP4 676 aa12.04□□□□□ -0.48
CALD1-213ENST00000462181 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
CALD1-213ENST00000462181 CSPP1Q1MSJ5 1256 aa12.03□□□□□ -0.48
CALD1-213ENST00000462181 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
CALD1-213ENST00000462181 PCMTD1Q96MG8 357 aaPredicted RBP12.03□□□□□ -0.48
CALD1-213ENST00000462181 PCDHGC3Q9UN70 934 aa12.03□□□□□ -0.48
CALD1-213ENST00000462181 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms