RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 TET3O43151 1660 aa11.8□□□□□ -0.52
TRAPPC10-205ENST00000461889 DEFB132Q7Z7B7 95 aa11.79□□□□□ -0.52
TRAPPC10-205ENST00000461889 PSDA5PKW4 1024 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC10-205ENST00000461889 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
TRAPPC10-205ENST00000461889 TMEM2Q9UHN6 1383 aa11.77□□□□□ -0.53
TRAPPC10-205ENST00000461889 ATRNO75882 1429 aa11.77□□□□□ -0.53
TRAPPC10-205ENST00000461889 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
TRAPPC10-205ENST00000461889 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
TRAPPC10-205ENST00000461889 C1QTNF8P60827 252 aa11.76□□□□□ -0.53
TRAPPC10-205ENST00000461889 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
TRAPPC10-205ENST00000461889 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
TRAPPC10-205ENST00000461889 USP21Q9UK80 565 aa11.76□□□□□ -0.53
TRAPPC10-205ENST00000461889 CEP350Q5VT06 3117 aa11.75□□□□□ -0.53
TRAPPC10-205ENST00000461889 BRINP3Q76B58 766 aa11.75□□□□□ -0.53
TRAPPC10-205ENST00000461889 FNBP4Q8N3X1 1017 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC10-205ENST00000461889 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
TRAPPC10-205ENST00000461889 MROH1Q8NDA8 1641 aa11.75□□□□□ -0.53
TRAPPC10-205ENST00000461889 SLC26A8Q96RN1 970 aa11.74□□□□□ -0.53
TRAPPC10-205ENST00000461889 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
TRAPPC10-205ENST00000461889 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
TRAPPC10-205ENST00000461889 PNPLA6Q8IY17 1366 aa11.73□□□□□ -0.53
TRAPPC10-205ENST00000461889 ZNF784Q8NCA9 323 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC10-205ENST00000461889 MAST1Q9Y2H9 1570 aa11.73□□□□□ -0.53
TRAPPC10-205ENST00000461889 DSG3P32926 999 aa11.72□□□□□ -0.53
TRAPPC10-205ENST00000461889 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
TRAPPC10-205ENST00000461889 C19orf44Q9H6X5 657 aa11.72□□□□□ -0.53
TRAPPC10-205ENST00000461889 UNC13BO14795 1591 aa11.71□□□□□ -0.53
TRAPPC10-205ENST00000461889 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
TRAPPC10-205ENST00000461889 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC10-205ENST00000461889 ATF3P18847 181 aa11.7□□□□□ -0.54
TRAPPC10-205ENST00000461889 CFDP1Q9UEE9 299 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC10-205ENST00000461889 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
TRAPPC10-205ENST00000461889 ADAMTS2O95450 1211 aa11.69□□□□□ -0.54
TRAPPC10-205ENST00000461889 CHD2O14647 1828 aaKnown RBP11.69□□□□□ -0.54
TRAPPC10-205ENST00000461889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAPPC10-205ENST00000461889 ASXL1Q8IXJ9 1541 aa11.68□□□□□ -0.54
TRAPPC10-205ENST00000461889 CCDC18Q5T9S5 1454 aa11.67□□□□□ -0.54
TRAPPC10-205ENST00000461889 PTCH1Q13635 1447 aa11.67□□□□□ -0.54
TRAPPC10-205ENST00000461889 SPHKAPQ2M3C7 1700 aa11.66□□□□□ -0.54
TRAPPC10-205ENST00000461889 GJD4Q96KN9 370 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC10-205ENST00000461889 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
TRAPPC10-205ENST00000461889 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
TRAPPC10-205ENST00000461889 BAG6P46379 1132 aa11.64□□□□□ -0.55
TRAPPC10-205ENST00000461889 R3HDM1Q15032 1099 aaKnown RBP11.64□□□□□ -0.55
TRAPPC10-205ENST00000461889 EFCAB6Q5THR3 1501 aa11.64□□□□□ -0.55
TRAPPC10-205ENST00000461889 DCCP43146 1447 aa11.63□□□□□ -0.55
TRAPPC10-205ENST00000461889 ARHGAP31Q2M1Z3 1444 aa11.63□□□□□ -0.55
TRAPPC10-205ENST00000461889 CFAP65Q6ZU64 1925 aaKnown RBP11.63□□□□□ -0.55
TRAPPC10-205ENST00000461889 SLC34A2O95436 690 aa11.62□□□□□ -0.55
TRAPPC10-205ENST00000461889 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
TRAPPC10-205ENST00000461889 NINLQ9Y2I6 1382 aa11.61□□□□□ -0.55
TRAPPC10-205ENST00000461889 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
TRAPPC10-205ENST00000461889 CCNB3Q8WWL7 1395 aa11.6□□□□□ -0.55
TRAPPC10-205ENST00000461889 ZNF644Q9H582 1327 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC10-205ENST00000461889 BRWD3Q6RI45 1802 aa11.59□□□□□ -0.55
TRAPPC10-205ENST00000461889 TBX22Q9Y458 520 aa11.59□□□□□ -0.55
TRAPPC10-205ENST00000461889 MST1RQ04912 1400 aa11.59□□□□□ -0.55
TRAPPC10-205ENST00000461889 RSPH4AQ5TD94 716 aa11.58□□□□□ -0.56
TRAPPC10-205ENST00000461889 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
TRAPPC10-205ENST00000461889 PLEKHG1Q9ULL1 1385 aa11.57□□□□□ -0.56
TRAPPC10-205ENST00000461889 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC10-205ENST00000461889 BCANQ96GW7 911 aa11.57□□□□□ -0.56
TRAPPC10-205ENST00000461889 PIK3R4Q99570 1358 aa11.56□□□□□ -0.56
TRAPPC10-205ENST00000461889 UTRNP46939 3433 aa11.56□□□□□ -0.56
TRAPPC10-205ENST00000461889 GLI3P10071 1580 aa11.56□□□□□ -0.56
TRAPPC10-205ENST00000461889 IDI1Q13907 227 aa11.56□□□□□ -0.56
TRAPPC10-205ENST00000461889 CCDC141Q6ZP82 1450 aa11.56□□□□□ -0.56
TRAPPC10-205ENST00000461889 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.55□□□□□ -0.56
TRAPPC10-205ENST00000461889 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
TRAPPC10-205ENST00000461889 ONECUT3O60422 494 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC10-205ENST00000461889 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC10-205ENST00000461889 DDX17Q92841 729 aaKnown RBP11.55□□□□□ -0.56
TRAPPC10-205ENST00000461889 PCDH10Q9P2E7 1040 aa11.55□□□□□ -0.56
TRAPPC10-205ENST00000461889 LAMC1P11047 1609 aa11.55□□□□□ -0.56
TRAPPC10-205ENST00000461889 CEP152O94986 1710 aa11.55□□□□□ -0.56
TRAPPC10-205ENST00000461889 EEA1Q15075 1411 aa11.54□□□□□ -0.56
TRAPPC10-205ENST00000461889 COL22A1Q8NFW1 1626 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC10-205ENST00000461889 EIF2AK4Q9P2K8 1649 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-205ENST00000461889 EN1Q05925 392 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC10-205ENST00000461889 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
TRAPPC10-205ENST00000461889 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
TRAPPC10-205ENST00000461889 SOS2Q07890 1332 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC10-205ENST00000461889 MTUS2Q5JR59 1369 aa11.54□□□□□ -0.56
TRAPPC10-205ENST00000461889 KRT27Q7Z3Y8 459 aa11.52□□□□□ -0.57
TRAPPC10-205ENST00000461889 UNC5CLQ8IV45 518 aa11.52□□□□□ -0.57
TRAPPC10-205ENST00000461889 PPP1R1BQ9UD71 204 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC10-205ENST00000461889 CAMTA1Q9Y6Y1 1673 aa11.52□□□□□ -0.57
TRAPPC10-205ENST00000461889 ZFYVE9O95405 1425 aa11.52□□□□□ -0.57
TRAPPC10-205ENST00000461889 MYOM2P54296 1465 aa11.51□□□□□ -0.57
TRAPPC10-205ENST00000461889 MARF1Q9Y4F3 1742 aaKnown RBP11.51□□□□□ -0.57
TRAPPC10-205ENST00000461889 ADGRB3O60242 1522 aa11.5□□□□□ -0.57
TRAPPC10-205ENST00000461889 GIGYF1O75420 1035 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC10-205ENST00000461889 CAPN15O75808 1086 aa11.5□□□□□ -0.57
TRAPPC10-205ENST00000461889 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
TRAPPC10-205ENST00000461889 SPON1Q9HCB6 807 aa11.5□□□□□ -0.57
TRAPPC10-205ENST00000461889 CHD4Q14839 1912 aa11.5□□□□□ -0.57
TRAPPC10-205ENST00000461889 SPINK5Q9NQ38 1064 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC10-205ENST00000461889 SLIT2O94813 1529 aa11.49□□□□□ -0.57
TRAPPC10-205ENST00000461889 ADAMTS13Q76LX8 1427 aa11.48□□□□□ -0.57
TRAPPC10-205ENST00000461889 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms