RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.92
RBM39-222ENST00000461849 RIMS2Q9UQ26 1411 aa20.77■□□□□ 0.91
RBM39-222ENST00000461849 MYO5BQ9ULV0 1848 aa20.76■□□□□ 0.91
RBM39-222ENST00000461849 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
RBM39-222ENST00000461849 KCNA6P17658 529 aa20.75■□□□□ 0.91
RBM39-222ENST00000461849 NAIPQ13075 1403 aa20.75■□□□□ 0.91
RBM39-222ENST00000461849 SOCS7O14512 581 aa20.74■□□□□ 0.91
RBM39-222ENST00000461849 ZFYVE9O95405 1425 aa20.74■□□□□ 0.91
RBM39-222ENST00000461849 PLEKHG1Q9ULL1 1385 aa20.73■□□□□ 0.91
RBM39-222ENST00000461849 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
RBM39-222ENST00000461849 HSPA1LP34931 641 aa20.72■□□□□ 0.91
RBM39-222ENST00000461849 NUTM2DQ5VT03 806 aaPredicted RBP20.71■□□□□ 0.91
RBM39-222ENST00000461849 PROSER2Q86WR7 435 aaPredicted RBP20.71■□□□□ 0.91
RBM39-222ENST00000461849 SPHKAPQ2M3C7 1700 aa20.7■□□□□ 0.9
RBM39-222ENST00000461849 HFM1A2PYH4 1435 aa20.7■□□□□ 0.9
RBM39-222ENST00000461849 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
RBM39-222ENST00000461849 TMEM94Q12767 1356 aa20.68■□□□□ 0.9
RBM39-222ENST00000461849 TBX22Q9Y458 520 aa20.66■□□□□ 0.9
RBM39-222ENST00000461849 ALKQ9UM73 1620 aa20.66■□□□□ 0.9
RBM39-222ENST00000461849 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
RBM39-222ENST00000461849 XIRP1Q702N8 1843 aaKnown RBP20.64■□□□□ 0.9
RBM39-222ENST00000461849 NWD1Q149M9 1564 aa20.64■□□□□ 0.9
RBM39-222ENST00000461849 RBM33Q96EV2 1170 aaKnown RBP20.64■□□□□ 0.89
RBM39-222ENST00000461849 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
RBM39-222ENST00000461849 DIP2AQ14689 1571 aa20.61■□□□□ 0.89
RBM39-222ENST00000461849 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
RBM39-222ENST00000461849 TRPM2O94759 1503 aa20.61■□□□□ 0.89
RBM39-222ENST00000461849 MSH6P52701 1360 aa20.6■□□□□ 0.89
RBM39-222ENST00000461849 CHD2O14647 1828 aaKnown RBP20.6■□□□□ 0.89
RBM39-222ENST00000461849 ADAMTS13Q76LX8 1427 aa20.6■□□□□ 0.89
RBM39-222ENST00000461849 PIK3R4Q99570 1358 aa20.59■□□□□ 0.89
RBM39-222ENST00000461849 CLTCL1P53675 1640 aa20.58■□□□□ 0.89
RBM39-222ENST00000461849 C14orf37Q86TY3 774 aa20.58■□□□□ 0.89
RBM39-222ENST00000461849 KIF1BO60333 1816 aa20.57■□□□□ 0.88
RBM39-222ENST00000461849 ILDR2Q71H61 639 aa20.55■□□□□ 0.88
RBM39-222ENST00000461849 FAM135BQ49AJ0 1406 aa20.54■□□□□ 0.88
RBM39-222ENST00000461849 AMOTL2Q9Y2J4 779 aa20.54■□□□□ 0.88
RBM39-222ENST00000461849 NCOA3Q9Y6Q9 1424 aa20.53■□□□□ 0.88
RBM39-222ENST00000461849 SETBP1Q9Y6X0 1596 aa20.51■□□□□ 0.87
RBM39-222ENST00000461849 SLAIN2Q9P270 581 aa20.51■□□□□ 0.87
RBM39-222ENST00000461849 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
RBM39-222ENST00000461849 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
RBM39-222ENST00000461849 NEXMIFQ5QGS0 1516 aa20.5■□□□□ 0.87
RBM39-222ENST00000461849 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
RBM39-222ENST00000461849 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
RBM39-222ENST00000461849 ROBO1Q9Y6N7 1651 aa20.49■□□□□ 0.87
RBM39-222ENST00000461849 FOXD1Q16676 465 aa20.49■□□□□ 0.87
RBM39-222ENST00000461849 ATF3P18847 181 aa20.48■□□□□ 0.87
RBM39-222ENST00000461849 MPHOSPH9Q99550 1183 aa20.48■□□□□ 0.87
RBM39-222ENST00000461849 C19orf44Q9H6X5 657 aa20.48■□□□□ 0.87
RBM39-222ENST00000461849 NRXN3Q9Y4C0 1643 aa20.48■□□□□ 0.87
RBM39-222ENST00000461849 RPGRIP1LQ68CZ1 1315 aa20.48■□□□□ 0.87
RBM39-222ENST00000461849 PTPRUQ92729 1446 aa20.47■□□□□ 0.87
RBM39-222ENST00000461849 CADPS2Q86UW7 1296 aa20.47■□□□□ 0.87
RBM39-222ENST00000461849 CCDC144AA2RUR9 1427 aa20.45■□□□□ 0.86
RBM39-222ENST00000461849 METP08581 1390 aa20.45■□□□□ 0.86
RBM39-222ENST00000461849 SETD5Q9C0A6 1442 aa20.44■□□□□ 0.86
RBM39-222ENST00000461849 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
RBM39-222ENST00000461849 XRN1Q8IZH2 1706 aaKnown RBP20.41■□□□□ 0.86
RBM39-222ENST00000461849 RGL3Q3MIN7 710 aa20.4■□□□□ 0.86
RBM39-222ENST00000461849 PHLPP1O60346 1717 aa20.38■□□□□ 0.85
RBM39-222ENST00000461849 PPLO60437 1756 aa20.37■□□□□ 0.85
RBM39-222ENST00000461849 DCCP43146 1447 aa20.36■□□□□ 0.85
RBM39-222ENST00000461849 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
RBM39-222ENST00000461849 HRCP23327 699 aa20.35■□□□□ 0.85
RBM39-222ENST00000461849 JCADQ9P266 1359 aa20.34■□□□□ 0.85
RBM39-222ENST00000461849 PCGF6Q9BYE7 350 aa20.33■□□□□ 0.85
RBM39-222ENST00000461849 ANKRD30BQ9BXX2 1392 aa20.33■□□□□ 0.84
RBM39-222ENST00000461849 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
RBM39-222ENST00000461849 ADGRL3Q9HAR2 1447 aa20.32■□□□□ 0.84
RBM39-222ENST00000461849 PTCH1Q13635 1447 aa20.31■□□□□ 0.84
RBM39-222ENST00000461849 BRINP3Q76B58 766 aa20.31■□□□□ 0.84
RBM39-222ENST00000461849 SETD1AO15047 1707 aaKnown RBP20.3■□□□□ 0.84
RBM39-222ENST00000461849 ADGRF5Q8IZF2 1346 aa20.3■□□□□ 0.84
RBM39-222ENST00000461849 MST1RQ04912 1400 aa20.28■□□□□ 0.84
RBM39-222ENST00000461849 COL16A1Q07092 1604 aaPredicted RBP20.28■□□□□ 0.84
RBM39-222ENST00000461849 ROBO2Q9HCK4 1378 aa20.28■□□□□ 0.84
RBM39-222ENST00000461849 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.84
RBM39-222ENST00000461849 NALCNQ8IZF0 1738 aa20.27■□□□□ 0.83
RBM39-222ENST00000461849 IFT172Q9UG01 1749 aa20.25■□□□□ 0.83
RBM39-222ENST00000461849 ASXL1Q8IXJ9 1541 aa20.25■□□□□ 0.83
RBM39-222ENST00000461849 SPATA31A6Q5VVP1 1343 aa20.25■□□□□ 0.83
RBM39-222ENST00000461849 STK26Q9P289 416 aa20.24■□□□□ 0.83
RBM39-222ENST00000461849 PRAG1Q86YV5 1406 aa20.24■□□□□ 0.83
RBM39-222ENST00000461849 MEX3CQ5U5Q3 659 aaKnown RBP20.23■□□□□ 0.83
RBM39-222ENST00000461849 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
RBM39-222ENST00000461849 PIK3C2GO75747 1445 aa20.22■□□□□ 0.83
RBM39-222ENST00000461849 TMEM132EQ6IEE7 984 aa20.21■□□□□ 0.83
RBM39-222ENST00000461849 C1orf167Q5SNV9 1468 aa20.2■□□□□ 0.82
RBM39-222ENST00000461849 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
RBM39-222ENST00000461849 SHPRHQ149N8 1683 aa20.19■□□□□ 0.82
RBM39-222ENST00000461849 LRPPRCP42704 1394 aaKnown RBP20.19■□□□□ 0.82
RBM39-222ENST00000461849 NHSL1Q5SYE7 1610 aa20.18■□□□□ 0.82
RBM39-222ENST00000461849 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
RBM39-222ENST00000461849 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
RBM39-222ENST00000461849 ABCC11Q96J66 1382 aa20.17■□□□□ 0.82
RBM39-222ENST00000461849 MYOM2P54296 1465 aa20.17■□□□□ 0.82
RBM39-222ENST00000461849 NUTM2BA6NNL0 878 aaPredicted RBP20.16■□□□□ 0.82
RBM39-222ENST00000461849 NUTM2EB1AL46 878 aaPredicted RBP20.16■□□□□ 0.82
RBM39-222ENST00000461849 NUTM2AQ8IVF1 878 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms