RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
BRCA1-207ENST00000461798 SYNMO15061 1565 aa14□□□□□ -0.17
BRCA1-207ENST00000461798 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
BRCA1-207ENST00000461798 PIK3C2BO00750 1634 aa13.99□□□□□ -0.17
BRCA1-207ENST00000461798 UNC13BO14795 1591 aa13.97□□□□□ -0.17
BRCA1-207ENST00000461798 ITGAEP38570 1179 aa13.97□□□□□ -0.17
BRCA1-207ENST00000461798 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
BRCA1-207ENST00000461798 LRRC7Q96NW7 1537 aa13.96□□□□□ -0.17
BRCA1-207ENST00000461798 TET3O43151 1660 aa13.96□□□□□ -0.17
BRCA1-207ENST00000461798 NUP155O75694 1391 aa13.96□□□□□ -0.18
BRCA1-207ENST00000461798 HDGFP51858 240 aaKnown RBP13.95□□□□□ -0.18
BRCA1-207ENST00000461798 KCNA6P17658 529 aa13.94□□□□□ -0.18
BRCA1-207ENST00000461798 ADGRB3O60242 1522 aa13.94□□□□□ -0.18
BRCA1-207ENST00000461798 ABCB7O75027 752 aa13.93□□□□□ -0.18
BRCA1-207ENST00000461798 ZFYVE9O95405 1425 aa13.92□□□□□ -0.18
BRCA1-207ENST00000461798 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
BRCA1-207ENST00000461798 IQGAP3Q86VI3 1631 aa13.92□□□□□ -0.18
BRCA1-207ENST00000461798 STRCP1A6NGW2 1772 aa13.91□□□□□ -0.18
BRCA1-207ENST00000461798 HSPA1LP34931 641 aa13.91□□□□□ -0.18
BRCA1-207ENST00000461798 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.91□□□□□ -0.18
BRCA1-207ENST00000461798 SLC26A8Q96RN1 970 aa13.91□□□□□ -0.18
BRCA1-207ENST00000461798 DISP3Q9P2K9 1392 aa13.91□□□□□ -0.18
BRCA1-207ENST00000461798 GCC2Q8IWJ2 1684 aa13.91□□□□□ -0.18
BRCA1-207ENST00000461798 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
BRCA1-207ENST00000461798 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
BRCA1-207ENST00000461798 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.19
BRCA1-207ENST00000461798 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
BRCA1-207ENST00000461798 E9PCH4 1651 aa13.88□□□□□ -0.19
BRCA1-207ENST00000461798 TMEM131LA2VDJ0 1609 aa13.88□□□□□ -0.19
BRCA1-207ENST00000461798 NAIPQ13075 1403 aa13.88□□□□□ -0.19
BRCA1-207ENST00000461798 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
BRCA1-207ENST00000461798 PPP1R15AO75807 674 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-207ENST00000461798 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
BRCA1-207ENST00000461798 PROSER2Q86WR7 435 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-207ENST00000461798 BCANQ96GW7 911 aa13.86□□□□□ -0.19
BRCA1-207ENST00000461798 ILDR2Q71H61 639 aa13.84□□□□□ -0.19
BRCA1-207ENST00000461798 HFM1A2PYH4 1435 aa13.83□□□□□ -0.2
BRCA1-207ENST00000461798 NKTRP30414 1462 aaKnown RBP13.83□□□□□ -0.2
BRCA1-207ENST00000461798 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-207ENST00000461798 PIK3R4Q99570 1358 aa13.83□□□□□ -0.2
BRCA1-207ENST00000461798 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
BRCA1-207ENST00000461798 ADAMTS13Q76LX8 1427 aa13.82□□□□□ -0.2
BRCA1-207ENST00000461798 NWD1Q149M9 1564 aa13.82□□□□□ -0.2
BRCA1-207ENST00000461798 NCOA3Q9Y6Q9 1424 aa13.81□□□□□ -0.2
BRCA1-207ENST00000461798 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-207ENST00000461798 XIRP1Q702N8 1843 aaKnown RBP13.8□□□□□ -0.2
BRCA1-207ENST00000461798 MYO5BQ9ULV0 1848 aa13.79□□□□□ -0.2
BRCA1-207ENST00000461798 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
BRCA1-207ENST00000461798 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
BRCA1-207ENST00000461798 MSH6P52701 1360 aa13.77□□□□□ -0.21
BRCA1-207ENST00000461798 DIP2AQ14689 1571 aa13.77□□□□□ -0.21
BRCA1-207ENST00000461798 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
BRCA1-207ENST00000461798 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
BRCA1-207ENST00000461798 SOCS7O14512 581 aa13.76□□□□□ -0.21
BRCA1-207ENST00000461798 ZNF326Q5BKZ1 582 aaKnown RBP13.76□□□□□ -0.21
BRCA1-207ENST00000461798 SLAIN2Q9P270 581 aa13.76□□□□□ -0.21
BRCA1-207ENST00000461798 TRPM2O94759 1503 aa13.75□□□□□ -0.21
BRCA1-207ENST00000461798 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
BRCA1-207ENST00000461798 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
BRCA1-207ENST00000461798 SPHKAPQ2M3C7 1700 aa13.75□□□□□ -0.21
BRCA1-207ENST00000461798 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
BRCA1-207ENST00000461798 C19orf44Q9H6X5 657 aa13.74□□□□□ -0.21
BRCA1-207ENST00000461798 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
BRCA1-207ENST00000461798 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
BRCA1-207ENST00000461798 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
BRCA1-207ENST00000461798 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
BRCA1-207ENST00000461798 MED1Q15648 1581 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-207ENST00000461798 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
BRCA1-207ENST00000461798 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
BRCA1-207ENST00000461798 CLTCL1P53675 1640 aa13.72□□□□□ -0.21
BRCA1-207ENST00000461798 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-207ENST00000461798 NEXMIFQ5QGS0 1516 aa13.7□□□□□ -0.22
BRCA1-207ENST00000461798 MPHOSPH9Q99550 1183 aa13.7□□□□□ -0.22
BRCA1-207ENST00000461798 METP08581 1390 aa13.7□□□□□ -0.22
BRCA1-207ENST00000461798 NRXN3Q9Y4C0 1643 aa13.69□□□□□ -0.22
BRCA1-207ENST00000461798 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
BRCA1-207ENST00000461798 ATF3P18847 181 aa13.68□□□□□ -0.22
BRCA1-207ENST00000461798 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
BRCA1-207ENST00000461798 DCCP43146 1447 aa13.65□□□□□ -0.22
BRCA1-207ENST00000461798 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-207ENST00000461798 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
BRCA1-207ENST00000461798 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
BRCA1-207ENST00000461798 KIF1BO60333 1816 aa13.64□□□□□ -0.23
BRCA1-207ENST00000461798 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-207ENST00000461798 JCADQ9P266 1359 aa13.63□□□□□ -0.23
BRCA1-207ENST00000461798 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-207ENST00000461798 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
BRCA1-207ENST00000461798 SPATA31E1Q6ZUB1 1445 aa13.63□□□□□ -0.23
BRCA1-207ENST00000461798 PRAG1Q86YV5 1406 aa13.63□□□□□ -0.23
BRCA1-207ENST00000461798 BRINP3Q76B58 766 aa13.62□□□□□ -0.23
BRCA1-207ENST00000461798 ANKRD30BQ9BXX2 1392 aa13.6□□□□□ -0.23
BRCA1-207ENST00000461798 PTCH1Q13635 1447 aa13.6□□□□□ -0.23
BRCA1-207ENST00000461798 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
BRCA1-207ENST00000461798 MST1RQ04912 1400 aa13.59□□□□□ -0.23
BRCA1-207ENST00000461798 HRCP23327 699 aa13.59□□□□□ -0.23
BRCA1-207ENST00000461798 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
BRCA1-207ENST00000461798 ADGRF5Q8IZF2 1346 aa13.59□□□□□ -0.23
BRCA1-207ENST00000461798 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
BRCA1-207ENST00000461798 AHDC1Q5TGY3 1603 aaPredicted RBP13.58□□□□□ -0.24
BRCA1-207ENST00000461798 SPATA31A6Q5VVP1 1343 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms