RNA–Protein interactions for RNA: ENST00000461448.5

SNHG12-201, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-201ENST00000461448 SLIT1O75093 1534 aa28.27■■■□□ 2.12
SNHG12-201ENST00000461448 ARHGAP23Q9P227 1491 aa28.27■■■□□ 2.12
SNHG12-201ENST00000461448 RPGRIP1LQ68CZ1 1315 aa28.27■■■□□ 2.12
SNHG12-201ENST00000461448 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.26■■■□□ 2.112e-10■■■■□ 20.6
SNHG12-201ENST00000461448 NEURL4Q96JN8 1562 aa28.26■■■□□ 2.11
SNHG12-201ENST00000461448 PPP1R15AO75807 674 aaPredicted RBP28.25■■■□□ 2.11
SNHG12-201ENST00000461448 LTKP29376 864 aa28.25■■■□□ 2.11
SNHG12-201ENST00000461448 NCKAP5LQ9HCH0 1330 aa28.25■■■□□ 2.11
SNHG12-201ENST00000461448 ZFYVE9O95405 1425 aa28.24■■■□□ 2.11
SNHG12-201ENST00000461448 TIMELESSQ9UNS1 1208 aa28.22■■■□□ 2.11
SNHG12-201ENST00000461448 DCAF11Q8TEB1 546 aa28.21■■■□□ 2.11
SNHG12-201ENST00000461448 NEXMIFQ5QGS0 1516 aa28.21■■■□□ 2.11
SNHG12-201ENST00000461448 SCAF11Q99590 1463 aaKnown RBP28.21■■■□□ 2.11
SNHG12-201ENST00000461448 SENP3Q9H4L4 574 aaPredicted RBP28.21■■■□□ 2.11
SNHG12-201ENST00000461448 KDM2AQ9Y2K7 1162 aa28.21■■■□□ 2.11
SNHG12-201ENST00000461448 TONSLQ96HA7 1378 aa28.2■■■□□ 2.1
SNHG12-201ENST00000461448 VGFO15240 615 aaPredicted RBP28.2■■■□□ 2.1
SNHG12-201ENST00000461448 L3MBTL2Q969R5 705 aa28.19■■■□□ 2.1
SNHG12-201ENST00000461448 BCANQ96GW7 911 aa28.18■■■□□ 2.1
SNHG12-201ENST00000461448 PPLO60437 1756 aa28.15■■■□□ 2.1
SNHG12-201ENST00000461448 ADGRF5Q8IZF2 1346 aa28.13■■■□□ 2.09
SNHG12-201ENST00000461448 POLR1AO95602 1720 aaPredicted RBP28.13■■■□□ 2.09
SNHG12-201ENST00000461448 NPHP4O75161 1426 aaPredicted RBP28.12■■■□□ 2.09
SNHG12-201ENST00000461448 ZEB1P37275 1124 aaPredicted RBP28.11■■■□□ 2.09
SNHG12-201ENST00000461448 STAC3Q96MF2 364 aa28.11■■■□□ 2.09
SNHG12-201ENST00000461448 PLEKHG1Q9ULL1 1385 aa28.11■■■□□ 2.09
SNHG12-201ENST00000461448 STRCQ7RTU9 1775 aa28.11■■■□□ 2.09
SNHG12-201ENST00000461448 IFT172Q9UG01 1749 aa28.11■■■□□ 2.09
SNHG12-201ENST00000461448 MED14O60244 1454 aa28.09■■■□□ 2.09
SNHG12-201ENST00000461448 MYOM2P54296 1465 aa28.09■■■□□ 2.09
SNHG12-201ENST00000461448 DMRT2Q9Y5R5 561 aa28.07■■■□□ 2.08
SNHG12-201ENST00000461448 SLC26A8Q96RN1 970 aa28.06■■■□□ 2.08
SNHG12-201ENST00000461448 IQGAP1P46940 1657 aa28.03■■■□□ 2.08
SNHG12-201ENST00000461448 NRXN1Q9ULB1 1477 aa28.02■■■□□ 2.08
SNHG12-201ENST00000461448 PIK3C2GO75747 1445 aa28.01■■■□□ 2.07
SNHG12-201ENST00000461448 SETBP1Q9Y6X0 1596 aa27.99■■■□□ 2.07
SNHG12-201ENST00000461448 ADAMTS13Q76LX8 1427 aa27.99■■■□□ 2.07
SNHG12-201ENST00000461448 TBX22Q9Y458 520 aa27.99■■■□□ 2.07
SNHG12-201ENST00000461448 PRAG1Q86YV5 1406 aa27.98■■■□□ 2.07
SNHG12-201ENST00000461448 CFAP70Q5T0N1 1121 aa27.97■■■□□ 2.07
SNHG12-201ENST00000461448 NRXN3Q9Y4C0 1643 aa27.97■■■□□ 2.07
SNHG12-201ENST00000461448 C14orf93Q9H972 538 aaKnown RBP27.96■■■□□ 2.07
SNHG12-201ENST00000461448 ALKQ9UM73 1620 aa27.95■■■□□ 2.06
SNHG12-201ENST00000461448 NBPF8Q3BBV2 869 aa27.94■■■□□ 2.06
SNHG12-201ENST00000461448 DIP2AQ14689 1571 aa27.92■■■□□ 2.06
SNHG12-201ENST00000461448 METP08581 1390 aa27.9■■■□□ 2.06
SNHG12-201ENST00000461448 TMEM132EQ6IEE7 984 aa27.89■■■□□ 2.06
SNHG12-201ENST00000461448 LAMC1P11047 1609 aa27.86■■■□□ 2.05
SNHG12-201ENST00000461448 NBPF1Q3BBV0 1214 aa27.86■■■□□ 2.05
SNHG12-201ENST00000461448 PIK3R4Q99570 1358 aa27.85■■■□□ 2.05
SNHG12-201ENST00000461448 ZNF335Q9H4Z2 1342 aaPredicted RBP27.84■■■□□ 2.05
SNHG12-201ENST00000461448 SETD1AO15047 1707 aaKnown RBP27.84■■■□□ 2.05
SNHG12-201ENST00000461448 KCNA6P17658 529 aa27.83■■■□□ 2.05
SNHG12-201ENST00000461448 STK26Q9P289 416 aa27.83■■■□□ 2.05
SNHG12-201ENST00000461448 AMOTL2Q9Y2J4 779 aa27.83■■■□□ 2.05
SNHG12-201ENST00000461448 PTPRUQ92729 1446 aa27.81■■■□□ 2.04
SNHG12-201ENST00000461448 KIAA1210Q9ULL0 1709 aa27.81■■■□□ 2.04
SNHG12-201ENST00000461448 ASXL1Q8IXJ9 1541 aa27.81■■■□□ 2.04
SNHG12-201ENST00000461448 ROCK2O75116 1388 aaKnown RBP27.81■■■□□ 2.04
SNHG12-201ENST00000461448 TRPM1Q7Z4N2 1603 aa27.8■■■□□ 2.04
SNHG12-201ENST00000461448 ADGRB1O14514 1584 aa27.78■■■□□ 2.04
SNHG12-201ENST00000461448 YTHDC2Q9H6S0 1430 aaKnown RBP27.78■■■□□ 2.04
SNHG12-201ENST00000461448 RALGAPBQ86X10 1494 aa27.77■■■□□ 2.04
SNHG12-201ENST00000461448 LRPPRCP42704 1394 aaKnown RBP27.77■■■□□ 2.04
SNHG12-201ENST00000461448 CHD2O14647 1828 aaKnown RBP27.75■■■□□ 2.03
SNHG12-201ENST00000461448 CARD11Q9BXL7 1154 aa27.74■■■□□ 2.03
SNHG12-201ENST00000461448 TRAK1Q9UPV9 953 aa27.74■■■□□ 2.03
SNHG12-201ENST00000461448 NWD1Q149M9 1564 aa27.72■■■□□ 2.03
SNHG12-201ENST00000461448 ABCC11Q96J66 1382 aa27.72■■■□□ 2.03
SNHG12-201ENST00000461448 PROSER2Q86WR7 435 aaPredicted RBP27.71■■■□□ 2.03
SNHG12-201ENST00000461448 GPRASP1Q5JY77 1395 aa27.71■■■□□ 2.03
SNHG12-201ENST00000461448 STRCP1A6NGW2 1772 aa27.7■■■□□ 2.02
SNHG12-201ENST00000461448 XRN1Q8IZH2 1706 aaKnown RBP27.7■■■□□ 2.02
SNHG12-201ENST00000461448 NKTRP30414 1462 aaKnown RBP27.68■■■□□ 2.02
SNHG12-201ENST00000461448 ROBO2Q9HCK4 1378 aa27.68■■■□□ 2.02
SNHG12-201ENST00000461448 RBM33Q96EV2 1170 aaKnown RBP27.67■■■□□ 2.02
SNHG12-201ENST00000461448 TECPR2O15040 1411 aa27.67■■■□□ 2.02
SNHG12-201ENST00000461448 CPS1P31327 1500 aa27.66■■■□□ 2.02
SNHG12-201ENST00000461448 WAPLQ7Z5K2 1190 aa27.66■■■□□ 2.02
SNHG12-201ENST00000461448 LTBP4Q8N2S1 1624 aa27.65■■■□□ 2.02
SNHG12-201ENST00000461448 PTCH1Q13635 1447 aa27.65■■■□□ 2.02
SNHG12-201ENST00000461448 POGKQ9P215 609 aa27.65■■■□□ 2.02
SNHG12-201ENST00000461448 SIRT1Q96EB6 747 aa27.64■■■□□ 2.02
SNHG12-201ENST00000461448 PRAM1Q96QH2 718 aa27.64■■■□□ 2.02
SNHG12-201ENST00000461448 KNDC1Q76NI1 1749 aa27.63■■■□□ 2.01
SNHG12-201ENST00000461448 SAFB2Q14151 953 aaKnown RBP eCLIP27.63■■■□□ 2.01
SNHG12-201ENST00000461448 TMEM94Q12767 1356 aa27.62■■■□□ 2.01
SNHG12-201ENST00000461448 LRRC7Q96NW7 1537 aa27.62■■■□□ 2.01
SNHG12-201ENST00000461448 DLC1Q96QB1 1528 aa27.62■■■□□ 2.01
SNHG12-201ENST00000461448 FAM135BQ49AJ0 1406 aa27.61■■■□□ 2.01
SNHG12-201ENST00000461448 C14orf37Q86TY3 774 aa27.61■■■□□ 2.01
SNHG12-201ENST00000461448 PLEKHH1Q9ULM0 1364 aa27.61■■■□□ 2.01
SNHG12-201ENST00000461448 EIF3AQ14152 1382 aaKnown RBP27.59■■■□□ 2.01
SNHG12-201ENST00000461448 CENPJQ9HC77 1338 aaPredicted RBP27.57■■■□□ 2
SNHG12-201ENST00000461448 USP47Q96K76 1375 aa27.56■■■□□ 2
SNHG12-201ENST00000461448 ARHGEF28Q8N1W1 1705 aaKnown RBP27.56■■■□□ 2
SNHG12-201ENST00000461448 NCOA3Q9Y6Q9 1424 aa27.53■■■□□ 2
SNHG12-201ENST00000461448 MINK1Q8N4C8 1332 aaPredicted RBP27.52■■■□□ 2
SNHG12-201ENST00000461448 EIF4G2P78344 907 aaKnown RBP eCLIP27.52■■■□□ 2
SNHG12-201ENST00000461448 CERKQ8TCT0 537 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms