RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
CHL1-209ENST00000461289 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
CHL1-209ENST00000461289 PCMTD1Q96MG8 357 aaPredicted RBP12.77□□□□□ -0.37
CHL1-209ENST00000461289 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
CHL1-209ENST00000461289 TMEM134Q9H6X4 195 aa12.77□□□□□ -0.37
CHL1-209ENST00000461289 SLC4A3P48751 1232 aa12.76□□□□□ -0.37
CHL1-209ENST00000461289 SEPT9Q9UHD8 586 aaPredicted RBP12.76□□□□□ -0.37
CHL1-209ENST00000461289 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
CHL1-209ENST00000461289 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
CHL1-209ENST00000461289 RSPH4AQ5TD94 716 aa12.74□□□□□ -0.37
CHL1-209ENST00000461289 RDH13Q8NBN7 331 aa12.74□□□□□ -0.37
CHL1-209ENST00000461289 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
CHL1-209ENST00000461289 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
CHL1-209ENST00000461289 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
CHL1-209ENST00000461289 SH3D19Q5HYK7 790 aa12.72□□□□□ -0.37
CHL1-209ENST00000461289 FAM98CQ17RN3 349 aaKnown RBP12.71□□□□□ -0.37
CHL1-209ENST00000461289 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
CHL1-209ENST00000461289 TIMELESSQ9UNS1 1208 aa12.71□□□□□ -0.37
CHL1-209ENST00000461289 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
CHL1-209ENST00000461289 SWT1Q5T5J6 900 aaKnown RBP12.69□□□□□ -0.38
CHL1-209ENST00000461289 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
CHL1-209ENST00000461289 TK2O00142 265 aa12.68□□□□□ -0.38
CHL1-209ENST00000461289 CD46P15529 392 aa12.68□□□□□ -0.38
CHL1-209ENST00000461289 SKIV2LQ15477 1246 aaKnown RBP12.68□□□□□ -0.38
CHL1-209ENST00000461289 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
CHL1-209ENST00000461289 TBC1D2Q9BYX2 928 aa12.68□□□□□ -0.38
CHL1-209ENST00000461289 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
CHL1-209ENST00000461289 RNF40O75150 1001 aa12.67□□□□□ -0.38
CHL1-209ENST00000461289 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHL1-209ENST00000461289 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
CHL1-209ENST00000461289 MRPL50Q8N5N7 158 aaKnown RBP12.67□□□□□ -0.38
CHL1-209ENST00000461289 MYSM1Q5VVJ2 828 aa12.65□□□□□ -0.38
CHL1-209ENST00000461289 ADGRD1Q6QNK2 874 aa12.64□□□□□ -0.39
CHL1-209ENST00000461289 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
CHL1-209ENST00000461289 SLF2Q8IX21 1173 aa12.64□□□□□ -0.39
CHL1-209ENST00000461289 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
CHL1-209ENST00000461289 CLK2P49760 499 aaKnown RBP12.63□□□□□ -0.39
CHL1-209ENST00000461289 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
CHL1-209ENST00000461289 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
CHL1-209ENST00000461289 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
CHL1-209ENST00000461289 KDM4AO75164 1064 aa12.59□□□□□ -0.39
CHL1-209ENST00000461289 RIC3Q7Z5B4 369 aa12.59□□□□□ -0.39
CHL1-209ENST00000461289 PROCA1Q8NCQ7 364 aaPredicted RBP12.59□□□□□ -0.39
CHL1-209ENST00000461289 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
CHL1-209ENST00000461289 LRCH3Q96II8 777 aa12.58□□□□□ -0.4
CHL1-209ENST00000461289 GCGRP47871 477 aa12.57□□□□□ -0.4
CHL1-209ENST00000461289 USP46P62068 366 aa12.57□□□□□ -0.4
CHL1-209ENST00000461289 SLC10A3P09131 477 aa12.56□□□□□ -0.4
CHL1-209ENST00000461289 ANKK1Q8NFD2 765 aa12.56□□□□□ -0.4
CHL1-209ENST00000461289 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
CHL1-209ENST00000461289 KRTAP3-3Q9BYR6 98 aa12.56□□□□□ -0.4
CHL1-209ENST00000461289 KRTAP3-2Q9BYR7 98 aa12.56□□□□□ -0.4
CHL1-209ENST00000461289 CSPP1Q1MSJ5 1256 aa12.55□□□□□ -0.4
CHL1-209ENST00000461289 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.55□□□□□ -0.4
CHL1-209ENST00000461289 MOXD2PA6NHM9 499 aa12.54□□□□□ -0.4
CHL1-209ENST00000461289 CFHP08603 1231 aa12.54□□□□□ -0.4
CHL1-209ENST00000461289 FLIIQ13045 1269 aa12.54□□□□□ -0.4
CHL1-209ENST00000461289 RSBN1LQ6PCB5 846 aaPredicted RBP12.53□□□□□ -0.4
CHL1-209ENST00000461289 LIMD1Q9UGP4 676 aa12.53□□□□□ -0.4
CHL1-209ENST00000461289 SPTLC1O15269 473 aa12.52□□□□□ -0.41
CHL1-209ENST00000461289 NDUFV2P19404 249 aa12.52□□□□□ -0.41
CHL1-209ENST00000461289 KMT5BQ4FZB7 885 aa12.52□□□□□ -0.41
CHL1-209ENST00000461289 GRIPAP1Q4V328 841 aa12.52□□□□□ -0.41
CHL1-209ENST00000461289 HRO43593 1189 aa12.51□□□□□ -0.41
CHL1-209ENST00000461289 HOXA2O43364 376 aa12.5□□□□□ -0.41
CHL1-209ENST00000461289 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHL1-209ENST00000461289 NUTM2BA6NNL0 878 aaPredicted RBP12.49□□□□□ -0.41
CHL1-209ENST00000461289 NUTM2EB1AL46 878 aaPredicted RBP12.49□□□□□ -0.41
CHL1-209ENST00000461289 GJA5P36382 358 aa12.49□□□□□ -0.41
CHL1-209ENST00000461289 NUTM2DQ5VT03 806 aaPredicted RBP12.49□□□□□ -0.41
CHL1-209ENST00000461289 NUTM2AQ8IVF1 878 aaPredicted RBP12.49□□□□□ -0.41
CHL1-209ENST00000461289 FDX1P10109 184 aa12.48□□□□□ -0.41
CHL1-209ENST00000461289 WNT2BQ93097 391 aa12.48□□□□□ -0.41
CHL1-209ENST00000461289 PPP4CP60510 307 aa12.47□□□□□ -0.41
CHL1-209ENST00000461289 TUSC1Q2TAM9 212 aa12.47□□□□□ -0.41
CHL1-209ENST00000461289 PRR14Q9BWN1 585 aa12.47□□□□□ -0.41
CHL1-209ENST00000461289 FUT2Q10981 343 aa12.46□□□□□ -0.41
CHL1-209ENST00000461289 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
CHL1-209ENST00000461289 RFC5P40937 340 aa12.45□□□□□ -0.42
CHL1-209ENST00000461289 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
CHL1-209ENST00000461289 BCAMP50895 628 aa12.44□□□□□ -0.42
CHL1-209ENST00000461289 ZBTB3Q9H5J0 574 aa12.44□□□□□ -0.42
CHL1-209ENST00000461289 PCDHB15Q9Y5E8 787 aa12.44□□□□□ -0.42
CHL1-209ENST00000461289 SOWAHBA6NEL2 793 aa12.43□□□□□ -0.42
CHL1-209ENST00000461289 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
CHL1-209ENST00000461289 QPCTQ16769 361 aa12.43□□□□□ -0.42
CHL1-209ENST00000461289 TMEM259Q4ZIN3 620 aa12.43□□□□□ -0.42
CHL1-209ENST00000461289 PPP2R2DQ66LE6 453 aa12.42□□□□□ -0.42
CHL1-209ENST00000461289 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
CHL1-209ENST00000461289 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
CHL1-209ENST00000461289 CABLES1Q8TDN4 633 aa12.41□□□□□ -0.42
CHL1-209ENST00000461289 HLA-CQ95604 372 aa12.41□□□□□ -0.42
CHL1-209ENST00000461289 TSR3Q9UJK0 312 aaKnown RBP12.41□□□□□ -0.42
CHL1-209ENST00000461289 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
CHL1-209ENST00000461289 LILRB3O75022 631 aa12.4□□□□□ -0.42
CHL1-209ENST00000461289 ZMYND15Q9H091 742 aa12.4□□□□□ -0.42
CHL1-209ENST00000461289 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
CHL1-209ENST00000461289 AP1G2O75843 785 aa12.39□□□□□ -0.43
CHL1-209ENST00000461289 MCM6Q14566 821 aa12.39□□□□□ -0.43
CHL1-209ENST00000461289 HRCP23327 699 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms