RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	PPP4C	P60510	307 aa		6.6	□□□□□ -1.35
FXR1-204	ENST00000461044	ZMYND10	O75800	440 aa		6.59	□□□□□ -1.35
FXR1-204	ENST00000461044	MAP2K5	Q13163	448 aa		6.59	□□□□□ -1.35
FXR1-204	ENST00000461044	PLA2G2E	Q9NZK7	142 aa		6.59	□□□□□ -1.35
FXR1-204	ENST00000461044	MINK1	Q8N4C8	1332 aa	Predicted RBP	6.58	□□□□□ -1.36
FXR1-204	ENST00000461044	SLC10A3	P09131	477 aa		6.58	□□□□□ -1.36
FXR1-204	ENST00000461044	APLP1	P51693	650 aa		6.58	□□□□□ -1.36
FXR1-204	ENST00000461044	HDGF	P51858	240 aa	Known RBP	6.58	□□□□□ -1.36
FXR1-204	ENST00000461044	BARGIN	Q6ZT62	677 aa		6.58	□□□□□ -1.36
FXR1-204	ENST00000461044	NYAP1	Q6ZVC0	841 aa		6.57	□□□□□ -1.36
FXR1-204	ENST00000461044	SLF2	Q8IX21	1173 aa		6.57	□□□□□ -1.36
FXR1-204	ENST00000461044	ITGBL1	O95965	494 aa	Predicted RBP	6.56	□□□□□ -1.36
FXR1-204	ENST00000461044	TJAP1	Q5JTD0	557 aa		6.56	□□□□□ -1.36
FXR1-204	ENST00000461044	RNF40	O75150	1001 aa		6.55	□□□□□ -1.36
FXR1-204	ENST00000461044	IFFO2	Q5TF58	517 aa		6.55	□□□□□ -1.36
FXR1-204	ENST00000461044	CCDC102A	Q96A19	550 aa		6.55	□□□□□ -1.36
FXR1-204	ENST00000461044	DAXX	Q9UER7	740 aa	Predicted RBP	6.55	□□□□□ -1.36
FXR1-204	ENST00000461044	TMUB1	Q9BVT8	246 aa		6.54	□□□□□ -1.36
FXR1-204	ENST00000461044	REPIN1	Q9BWE0	567 aa	Known RBP	6.53	□□□□□ -1.36
FXR1-204	ENST00000461044	ZNF516	Q92618	1163 aa		6.52	□□□□□ -1.37
FXR1-204	ENST00000461044	MTR	Q99707	1265 aa		6.52	□□□□□ -1.37
FXR1-204	ENST00000461044	DDX11L8	A8MPP1	907 aa		6.5	□□□□□ -1.37
FXR1-204	ENST00000461044	ACTN4	O43707	911 aa	Known RBP	6.5	□□□□□ -1.37
FXR1-204	ENST00000461044	CFH	P08603	1231 aa		6.5	□□□□□ -1.37
FXR1-204	ENST00000461044	MDM2	Q00987	491 aa	Predicted RBP	6.5	□□□□□ -1.37
FXR1-204	ENST00000461044	KRI1	Q8N9T8	703 aa	Known RBP	6.5	□□□□□ -1.37
FXR1-204	ENST00000461044	KCNC4	Q03721	635 aa		6.49	□□□□□ -1.37
FXR1-204	ENST00000461044	NECTIN2	Q92692	538 aa		6.49	□□□□□ -1.37
FXR1-204	ENST00000461044	IL21	Q9HBE4	155 aa		6.49	□□□□□ -1.37
FXR1-204	ENST00000461044		A0A0G2JS52	829 aa		6.48	□□□□□ -1.37
FXR1-204	ENST00000461044	GCGR	P47871	477 aa		6.48	□□□□□ -1.37
FXR1-204	ENST00000461044	SLC4A3	P48751	1232 aa		6.48	□□□□□ -1.37
FXR1-204	ENST00000461044	BLOC1S3	Q6QNY0	202 aa		6.48	□□□□□ -1.37
FXR1-204	ENST00000461044	NKX2-3	Q8TAU0	364 aa		6.48	□□□□□ -1.37
FXR1-204	ENST00000461044	TRIM66	O15016	1216 aa		6.47	□□□□□ -1.37
FXR1-204	ENST00000461044	CD46	P15529	392 aa		6.47	□□□□□ -1.37
FXR1-204	ENST00000461044	COPS2	P61201	443 aa		6.47	□□□□□ -1.37
FXR1-204	ENST00000461044	AMHR2	Q16671	573 aa		6.47	□□□□□ -1.37
FXR1-204	ENST00000461044	PCDHB3	Q9Y5E6	796 aa		6.47	□□□□□ -1.37
FXR1-204	ENST00000461044	KMT5B	Q4FZB7	885 aa		6.46	□□□□□ -1.38
FXR1-204	ENST00000461044	RDH13	Q8NBN7	331 aa		6.46	□□□□□ -1.38
FXR1-204	ENST00000461044	SLC24A3	Q9HC58	644 aa		6.46	□□□□□ -1.38
FXR1-204	ENST00000461044	GPCPD1	Q9NPB8	672 aa		6.46	□□□□□ -1.38
FXR1-204	ENST00000461044	FAM217B	Q9NTX9	383 aa	Predicted RBP	6.46	□□□□□ -1.38
FXR1-204	ENST00000461044	ZPR1	O75312	459 aa		6.45	□□□□□ -1.38
FXR1-204	ENST00000461044	CLCN1	P35523	988 aa		6.45	□□□□□ -1.38
FXR1-204	ENST00000461044	PUS10	Q3MIT2	529 aa	Known RBP	6.45	□□□□□ -1.38
FXR1-204	ENST00000461044	AK7	Q96M32	723 aa		6.45	□□□□□ -1.38
FXR1-204	ENST00000461044	PRR14	Q9BWN1	585 aa		6.45	□□□□□ -1.38
FXR1-204	ENST00000461044	FUT2	Q10981	343 aa		6.44	□□□□□ -1.38
FXR1-204	ENST00000461044	RSPH4A	Q5TD94	716 aa		6.44	□□□□□ -1.38
FXR1-204	ENST00000461044	SULF1	Q8IWU6	871 aa		6.44	□□□□□ -1.38
FXR1-204	ENST00000461044	MORN1	Q5T089	497 aa		6.43	□□□□□ -1.38
FXR1-204	ENST00000461044	SCUBE3	Q8IX30	993 aa		6.43	□□□□□ -1.38
FXR1-204	ENST00000461044	TIMELESS	Q9UNS1	1208 aa		6.43	□□□□□ -1.38
FXR1-204	ENST00000461044	TLL1	O43897	1013 aa		6.42	□□□□□ -1.38
FXR1-204	ENST00000461044	SSTR3	P32745	418 aa	Predicted RBP	6.42	□□□□□ -1.38
FXR1-204	ENST00000461044	PARP9	Q8IXQ6	854 aa		6.42	□□□□□ -1.38
FXR1-204	ENST00000461044	ATP6V1A	P38606	617 aa		6.41	□□□□□ -1.38
FXR1-204	ENST00000461044	PPP1R18	Q6NYC8	613 aa		6.41	□□□□□ -1.38
FXR1-204	ENST00000461044	THAP11	Q96EK4	314 aa		6.41	□□□□□ -1.38
FXR1-204	ENST00000461044	SLC27A5	Q9Y2P5	690 aa		6.41	□□□□□ -1.38
FXR1-204	ENST00000461044	MS4A1	P11836	297 aa		6.4	□□□□□ -1.38
FXR1-204	ENST00000461044	PDE4D	Q08499	809 aa		6.4	□□□□□ -1.38
FXR1-204	ENST00000461044	GIGYF2	Q6Y7W6	1299 aa	Known RBP	6.4	□□□□□ -1.38
FXR1-204	ENST00000461044	HLA-C	Q95604	372 aa		6.4	□□□□□ -1.38
FXR1-204	ENST00000461044	KDM4A	O75164	1064 aa		6.39	□□□□□ -1.39
FXR1-204	ENST00000461044	NR1I2	O75469	434 aa		6.39	□□□□□ -1.39
FXR1-204	ENST00000461044	RGS20	O76081	388 aa		6.38	□□□□□ -1.39
FXR1-204	ENST00000461044	TTLL12	Q14166	644 aa	Predicted RBP	6.38	□□□□□ -1.39
FXR1-204	ENST00000461044	BRICD5	Q6PL45	260 aa		6.38	□□□□□ -1.39
FXR1-204	ENST00000461044	EMID1	Q96A84	441 aa	Predicted RBP	6.38	□□□□□ -1.39
FXR1-204	ENST00000461044	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	6.38	□□□□□ -1.39
FXR1-204	ENST00000461044	GUCA2A	Q02747	115 aa		6.37	□□□□□ -1.39
FXR1-204	ENST00000461044	FAM160A2	Q8N612	972 aa	Predicted RBP	6.37	□□□□□ -1.39
FXR1-204	ENST00000461044	SPIRE2	Q8WWL2	714 aa		6.37	□□□□□ -1.39
FXR1-204	ENST00000461044	SALL2	Q9Y467	1007 aa	Predicted RBP	6.37	□□□□□ -1.39
FXR1-204	ENST00000461044	GTF3C3	Q9Y5Q9	886 aa		6.37	□□□□□ -1.39
FXR1-204	ENST00000461044	PPEF1	O14829	653 aa	Predicted RBP	6.36	□□□□□ -1.39
FXR1-204	ENST00000461044	HOXA2	O43364	376 aa		6.36	□□□□□ -1.39
FXR1-204	ENST00000461044	ADH1B	P00325	375 aa		6.36	□□□□□ -1.39
FXR1-204	ENST00000461044	RNF19B	Q6ZMZ0	732 aa		6.36	□□□□□ -1.39
FXR1-204	ENST00000461044	SPSB2	Q99619	263 aa		6.36	□□□□□ -1.39
FXR1-204	ENST00000461044	BEGAIN	Q9BUH8	593 aa		6.36	□□□□□ -1.39
FXR1-204	ENST00000461044	RNF223	E7ERA6	249 aa		6.35	□□□□□ -1.39
FXR1-204	ENST00000461044	S1PR4	O95977	384 aa		6.35	□□□□□ -1.39
FXR1-204	ENST00000461044	USP46	P62068	366 aa		6.35	□□□□□ -1.39
FXR1-204	ENST00000461044	PCDHGC3	Q9UN70	934 aa		6.35	□□□□□ -1.39
FXR1-204	ENST00000461044	NDUFV2	P19404	249 aa		6.34	□□□□□ -1.39
FXR1-204	ENST00000461044	FMNL1	O95466	1100 aa	Predicted RBP	6.33	□□□□□ -1.4
FXR1-204	ENST00000461044	GRIPAP1	Q4V328	841 aa		6.33	□□□□□ -1.4
FXR1-204	ENST00000461044	SYMPK	Q92797	1274 aa	Known RBP	6.33	□□□□□ -1.4
FXR1-204	ENST00000461044	TBC1D2	Q9BYX2	928 aa		6.33	□□□□□ -1.4
FXR1-204	ENST00000461044	SLC6A16	Q9GZN6	736 aa		6.33	□□□□□ -1.4
FXR1-204	ENST00000461044	MOXD2P	A6NHM9	499 aa		6.32	□□□□□ -1.4
FXR1-204	ENST00000461044	PLA2G2C	Q5R387	149 aa		6.32	□□□□□ -1.4
FXR1-204	ENST00000461044	NUTM1	Q86Y26	1132 aa		6.32	□□□□□ -1.4
FXR1-204	ENST00000461044	GPBP1L1	Q9HC44	474 aa	Predicted RBP	6.32	□□□□□ -1.4
FXR1-204	ENST00000461044	PRDM9	Q9NQV7	894 aa		6.32	□□□□□ -1.4
FXR1-204	ENST00000461044	ANKLE1	Q8NAG6	615 aa		6.31	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms