RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 BIVM-ERCC5R4GMW8 1640 aa8.22□□□□□ -1.09
SF3A3-202ENST00000460925 A6NJR5 290 aa8.22□□□□□ -1.09
SF3A3-202ENST00000460925 MAMSTRQ6ZN01 415 aa8.22□□□□□ -1.09
SF3A3-202ENST00000460925 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.22□□□□□ -1.09
SF3A3-202ENST00000460925 TOPBP1Q92547 1522 aa8.22□□□□□ -1.09
SF3A3-202ENST00000460925 WRNQ14191 1432 aaPredicted RBP eCLIP8.21□□□□□ -1.09
SF3A3-202ENST00000460925 WDR62O43379 1518 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 POTEB2H3BUK9 544 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 MCM6Q14566 821 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 DIXDC1Q155Q3 683 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 PPP4R3BQ5MIZ7 849 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 MYSM1Q5VVJ2 828 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 EYA1Q99502 592 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 SCUBE2Q9NQ36 999 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 LHX6Q9UPM6 363 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 TOP2BQ02880 1626 aa8.21□□□□□ -1.1
SF3A3-202ENST00000460925 ZNF710Q8N1W2 664 aa8.2□□□□□ -1.1
SF3A3-202ENST00000460925 NLRP7Q8WX94 980 aa8.2□□□□□ -1.1
SF3A3-202ENST00000460925 FAM198AQ9UFP1 575 aa8.2□□□□□ -1.1
SF3A3-202ENST00000460925 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
SF3A3-202ENST00000460925 COL9A1P20849 921 aa8.19□□□□□ -1.1
SF3A3-202ENST00000460925 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-202ENST00000460925 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
SF3A3-202ENST00000460925 FGD5Q6ZNL6 1462 aa8.18□□□□□ -1.1
SF3A3-202ENST00000460925 RCCD1A6NED2 376 aa8.17□□□□□ -1.1
SF3A3-202ENST00000460925 CLK2P49760 499 aaKnown RBP8.17□□□□□ -1.1
SF3A3-202ENST00000460925 TUSC1Q2TAM9 212 aa8.17□□□□□ -1.1
SF3A3-202ENST00000460925 TSKSQ9UJT2 592 aa8.17□□□□□ -1.1
SF3A3-202ENST00000460925 POLA1P09884 1462 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-202ENST00000460925 CD46P15529 392 aa8.16□□□□□ -1.1
SF3A3-202ENST00000460925 PTPREP23469 700 aa8.16□□□□□ -1.1
SF3A3-202ENST00000460925 C1orf115Q9H7X2 142 aa8.16□□□□□ -1.1
SF3A3-202ENST00000460925 POLR3EQ9NVU0 708 aa8.16□□□□□ -1.1
SF3A3-202ENST00000460925 WDR97A6NE52 1622 aa8.15□□□□□ -1.1
SF3A3-202ENST00000460925 RAD54L2Q9Y4B4 1467 aa8.15□□□□□ -1.1
SF3A3-202ENST00000460925 SNPHO15079 494 aa8.15□□□□□ -1.1
SF3A3-202ENST00000460925 HOXB1P14653 301 aaPredicted RBP8.15□□□□□ -1.1
SF3A3-202ENST00000460925 UBTFP17480 764 aaKnown RBP8.15□□□□□ -1.1
SF3A3-202ENST00000460925 DNAJB2P25686 324 aa8.15□□□□□ -1.1
SF3A3-202ENST00000460925 SULF1Q8IWU6 871 aa8.15□□□□□ -1.1
SF3A3-202ENST00000460925 BANK1Q8NDB2 785 aa8.15□□□□□ -1.1
SF3A3-202ENST00000460925 CUX2O14529 1486 aa8.14□□□□□ -1.11
SF3A3-202ENST00000460925 SPDYE5A6NIY4 337 aa8.14□□□□□ -1.11
SF3A3-202ENST00000460925 TRIM6-TRIM34B2RNG4 842 aa8.14□□□□□ -1.11
SF3A3-202ENST00000460925 NBPF26B4DH59 902 aa8.14□□□□□ -1.11
SF3A3-202ENST00000460925 TRAK2O60296 914 aa8.14□□□□□ -1.11
SF3A3-202ENST00000460925 GJA5P36382 358 aa8.14□□□□□ -1.11
SF3A3-202ENST00000460925 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
SF3A3-202ENST00000460925 NUDT18Q6ZVK8 323 aa8.13□□□□□ -1.11
SF3A3-202ENST00000460925 SPIRE2Q8WWL2 714 aa8.13□□□□□ -1.11
SF3A3-202ENST00000460925 TATDN2Q93075 761 aa8.13□□□□□ -1.11
SF3A3-202ENST00000460925 TMEM134Q9H6X4 195 aa8.13□□□□□ -1.11
SF3A3-202ENST00000460925 TARBP1Q13395 1621 aaKnown RBP8.13□□□□□ -1.11
SF3A3-202ENST00000460925 C3orf80F5H4A9 247 aa8.12□□□□□ -1.11
SF3A3-202ENST00000460925 SPTLC1O15269 473 aa8.12□□□□□ -1.11
SF3A3-202ENST00000460925 PACS2Q86VP3 889 aa8.12□□□□□ -1.11
SF3A3-202ENST00000460925 CLUAP1Q96AJ1 413 aa8.12□□□□□ -1.11
SF3A3-202ENST00000460925 APBB1O00213 710 aa8.11□□□□□ -1.11
SF3A3-202ENST00000460925 RFC5P40937 340 aa8.11□□□□□ -1.11
SF3A3-202ENST00000460925 TMEM259Q4ZIN3 620 aa8.11□□□□□ -1.11
SF3A3-202ENST00000460925 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
SF3A3-202ENST00000460925 LIMD1Q9UGP4 676 aa8.11□□□□□ -1.11
SF3A3-202ENST00000460925 ZNF608Q9ULD9 1512 aaPredicted RBP8.1□□□□□ -1.11
SF3A3-202ENST00000460925 SOCS7O14512 581 aa8.1□□□□□ -1.11
SF3A3-202ENST00000460925 FNBP4Q8N3X1 1017 aaPredicted RBP8.1□□□□□ -1.11
SF3A3-202ENST00000460925 PNMA3Q9UL41 463 aa8.1□□□□□ -1.11
SF3A3-202ENST00000460925 EIF4G3O43432 1585 aaKnown RBP8.1□□□□□ -1.11
SF3A3-202ENST00000460925 RUSC2Q8N2Y8 1516 aa8.09□□□□□ -1.11
SF3A3-202ENST00000460925 RSBN1LQ6PCB5 846 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-202ENST00000460925 PROSER2Q86WR7 435 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-202ENST00000460925 SOGA1O94964 1423 aa8.09□□□□□ -1.11
SF3A3-202ENST00000460925 PBRM1Q86U86 1689 aa8.08□□□□□ -1.12
SF3A3-202ENST00000460925 FBXO31Q5XUX0 539 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-202ENST00000460925 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-202ENST00000460925 ABCA5Q8WWZ7 1642 aa8.07□□□□□ -1.12
SF3A3-202ENST00000460925 ARID3CA6NKF2 412 aa8.07□□□□□ -1.12
SF3A3-202ENST00000460925 DDX11L8A8MPP1 907 aa8.07□□□□□ -1.12
SF3A3-202ENST00000460925 RAD21O60216 631 aa8.07□□□□□ -1.12
SF3A3-202ENST00000460925 NUTM1Q86Y26 1132 aa8.07□□□□□ -1.12
SF3A3-202ENST00000460925 ABCA10Q8WWZ4 1543 aa8.07□□□□□ -1.12
SF3A3-202ENST00000460925 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
SF3A3-202ENST00000460925 ZBED2Q9BTP6 218 aa8.06□□□□□ -1.12
SF3A3-202ENST00000460925 TDRD9Q8NDG6 1382 aaKnown RBP8.06□□□□□ -1.12
SF3A3-202ENST00000460925 AQRO60306 1485 aaKnown RBP eCLIP8.06□□□□□ -1.121e-6■■■■■ 39.2
SF3A3-202ENST00000460925 MOXD2PA6NHM9 499 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 LILRB3O75022 631 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 USP46P62068 366 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 PROX2Q3B8N5 592 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 FAM9AQ8IZU1 332 aaPredicted RBP8.05□□□□□ -1.12
SF3A3-202ENST00000460925 POM121Q96HA1 1249 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 KCNH8Q96L42 1107 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 SLC4A5Q9BY07 1137 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 SNRKQ9NRH2 765 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 COG6Q9Y2V7 657 aa8.05□□□□□ -1.12
SF3A3-202ENST00000460925 PRPF38BQ5VTL8 546 aaKnown RBP8.04□□□□□ -1.12
SF3A3-202ENST00000460925 KCNK17Q96T54 332 aa8.04□□□□□ -1.12
SF3A3-202ENST00000460925 KDM4AO75164 1064 aa8.03□□□□□ -1.12
SF3A3-202ENST00000460925 GCGRP47871 477 aa8.03□□□□□ -1.12
SF3A3-202ENST00000460925 RSPH4AQ5TD94 716 aa8.03□□□□□ -1.12
SF3A3-202ENST00000460925 ARID3AQ99856 593 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms