RNA–Protein interactions for RNA: ENST00000460908.1

TRIM2-205, Transcript of tripartite motif containing 2, humanhuman

TSL 3

Gene TRIM2, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-205ENST00000460908 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
TRIM2-205ENST00000460908 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
TRIM2-205ENST00000460908 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
TRIM2-205ENST00000460908 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
TRIM2-205ENST00000460908 HRO43593 1189 aa12.33□□□□□ -0.44
TRIM2-205ENST00000460908 NLRP7Q8WX94 980 aa12.33□□□□□ -0.44
TRIM2-205ENST00000460908 SLF2Q8IX21 1173 aa12.32□□□□□ -0.44
TRIM2-205ENST00000460908 ANKK1Q8NFD2 765 aa12.32□□□□□ -0.44
TRIM2-205ENST00000460908 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
TRIM2-205ENST00000460908 KRTAP3-3Q9BYR6 98 aa12.32□□□□□ -0.44
TRIM2-205ENST00000460908 KRTAP3-2Q9BYR7 98 aa12.32□□□□□ -0.44
TRIM2-205ENST00000460908 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
TRIM2-205ENST00000460908 LRCH3Q96II8 777 aa12.31□□□□□ -0.44
TRIM2-205ENST00000460908 DDX11L8A8MPP1 907 aa12.3□□□□□ -0.44
TRIM2-205ENST00000460908 RNF40O75150 1001 aa12.29□□□□□ -0.44
TRIM2-205ENST00000460908 SAMD7Q7Z3H4 446 aa12.29□□□□□ -0.44
TRIM2-205ENST00000460908 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
TRIM2-205ENST00000460908 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
TRIM2-205ENST00000460908 FAM217BQ9NTX9 383 aaPredicted RBP12.29□□□□□ -0.44
TRIM2-205ENST00000460908 IL27Q8NEV9 243 aa12.28□□□□□ -0.44
TRIM2-205ENST00000460908 WNT2BQ93097 391 aa12.28□□□□□ -0.44
TRIM2-205ENST00000460908 REPIN1Q9BWE0 567 aaKnown RBP12.28□□□□□ -0.44
TRIM2-205ENST00000460908 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
TRIM2-205ENST00000460908 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
TRIM2-205ENST00000460908 TMEM132AQ24JP5 1023 aa12.27□□□□□ -0.45
TRIM2-205ENST00000460908 BEGAINQ9BUH8 593 aa12.25□□□□□ -0.45
TRIM2-205ENST00000460908 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
TRIM2-205ENST00000460908 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
TRIM2-205ENST00000460908 PPP4CP60510 307 aa12.23□□□□□ -0.45
TRIM2-205ENST00000460908 FAM117AQ9C073 453 aa12.23□□□□□ -0.45
TRIM2-205ENST00000460908 MS4A1P11836 297 aa12.22□□□□□ -0.45
TRIM2-205ENST00000460908 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
TRIM2-205ENST00000460908 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
TRIM2-205ENST00000460908 SOWAHBA6NEL2 793 aa12.2□□□□□ -0.46
TRIM2-205ENST00000460908 CD46P15529 392 aa12.2□□□□□ -0.46
TRIM2-205ENST00000460908 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
TRIM2-205ENST00000460908 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
TRIM2-205ENST00000460908 TSR3Q9UJK0 312 aaKnown RBP12.19□□□□□ -0.46
TRIM2-205ENST00000460908 KCTD12Q96CX2 325 aaKnown RBP12.18□□□□□ -0.46
TRIM2-205ENST00000460908 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
TRIM2-205ENST00000460908 HPS5Q9UPZ3 1129 aa12.17□□□□□ -0.46
TRIM2-205ENST00000460908 GCGRP47871 477 aa12.16□□□□□ -0.46
TRIM2-205ENST00000460908 USP46P62068 366 aa12.15□□□□□ -0.46
TRIM2-205ENST00000460908 KDM4AO75164 1064 aa12.14□□□□□ -0.47
TRIM2-205ENST00000460908 SLC10A3P09131 477 aa12.14□□□□□ -0.47
TRIM2-205ENST00000460908 BCAMP50895 628 aa12.14□□□□□ -0.47
TRIM2-205ENST00000460908 CFHP08603 1231 aa12.13□□□□□ -0.47
TRIM2-205ENST00000460908 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
TRIM2-205ENST00000460908 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
TRIM2-205ENST00000460908 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
TRIM2-205ENST00000460908 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
TRIM2-205ENST00000460908 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
TRIM2-205ENST00000460908 PLEKHG3A1L390 1219 aa12.1□□□□□ -0.47
TRIM2-205ENST00000460908 PTPN5P54829 565 aa12.1□□□□□ -0.47
TRIM2-205ENST00000460908 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
TRIM2-205ENST00000460908 SPIRE2Q8WWL2 714 aa12.1□□□□□ -0.47
TRIM2-205ENST00000460908 SH3D19Q5HYK7 790 aa12.08□□□□□ -0.48
TRIM2-205ENST00000460908 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
TRIM2-205ENST00000460908 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
TRIM2-205ENST00000460908 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
TRIM2-205ENST00000460908 POLR3EQ9NVU0 708 aa12.06□□□□□ -0.48
TRIM2-205ENST00000460908 WBP1LQ9NX94 342 aa12.06□□□□□ -0.48
TRIM2-205ENST00000460908 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
TRIM2-205ENST00000460908 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
TRIM2-205ENST00000460908 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
TRIM2-205ENST00000460908 GJA5P36382 358 aa12.03□□□□□ -0.48
TRIM2-205ENST00000460908 CLK2P49760 499 aaKnown RBP12.03□□□□□ -0.48
TRIM2-205ENST00000460908 FUT2Q10981 343 aa12.03□□□□□ -0.48
TRIM2-205ENST00000460908 HCSTQ9UBK5 93 aa12.03□□□□□ -0.48
TRIM2-205ENST00000460908 PCDHB3Q9Y5E6 796 aa12.03□□□□□ -0.48
TRIM2-205ENST00000460908 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
TRIM2-205ENST00000460908 HOXA2O43364 376 aa12.01□□□□□ -0.49
TRIM2-205ENST00000460908 FDX1P10109 184 aa12.01□□□□□ -0.49
TRIM2-205ENST00000460908 NR1I2O75469 434 aa12□□□□□ -0.49
TRIM2-205ENST00000460908 APLP1P51693 650 aa12□□□□□ -0.49
TRIM2-205ENST00000460908 SPTLC1O15269 473 aa11.99□□□□□ -0.49
TRIM2-205ENST00000460908 Q3C1V9 767 aa11.99□□□□□ -0.49
TRIM2-205ENST00000460908 RSBN1LQ6PCB5 846 aaPredicted RBP11.99□□□□□ -0.49
TRIM2-205ENST00000460908 NUTM2BA6NNL0 878 aaPredicted RBP11.98□□□□□ -0.49
TRIM2-205ENST00000460908 NUTM2EB1AL46 878 aaPredicted RBP11.98□□□□□ -0.49
TRIM2-205ENST00000460908 NDUFV2P19404 249 aa11.98□□□□□ -0.49
TRIM2-205ENST00000460908 NUTM2DQ5VT03 806 aaPredicted RBP11.98□□□□□ -0.49
TRIM2-205ENST00000460908 NUTM2AQ8IVF1 878 aaPredicted RBP11.98□□□□□ -0.49
TRIM2-205ENST00000460908 TUSC1Q2TAM9 212 aa11.97□□□□□ -0.49
TRIM2-205ENST00000460908 CSPP1Q1MSJ5 1256 aa11.96□□□□□ -0.49
TRIM2-205ENST00000460908 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
TRIM2-205ENST00000460908 MORN1Q5T089 497 aa11.95□□□□□ -0.5
TRIM2-205ENST00000460908 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
TRIM2-205ENST00000460908 PRPF38BQ5VTL8 546 aaKnown RBP11.94□□□□□ -0.5
TRIM2-205ENST00000460908 PROCA1Q8NCQ7 364 aaPredicted RBP11.94□□□□□ -0.5
TRIM2-205ENST00000460908 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
TRIM2-205ENST00000460908 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
TRIM2-205ENST00000460908 C6orf229H3BNL8 230 aa11.93□□□□□ -0.5
TRIM2-205ENST00000460908 SCUBE3Q8IX30 993 aa11.93□□□□□ -0.5
TRIM2-205ENST00000460908 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
TRIM2-205ENST00000460908 SLC27A5Q9Y2P5 690 aa11.92□□□□□ -0.5
TRIM2-205ENST00000460908 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
TRIM2-205ENST00000460908 COPS2P61201 443 aa11.91□□□□□ -0.5
TRIM2-205ENST00000460908 MTMR2Q13614 643 aa11.91□□□□□ -0.5
TRIM2-205ENST00000460908 BLOC1S3Q6QNY0 202 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms