RNA–Protein interactions for RNA: ENST00000460828.5

PCMT1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 5

Gene PCMT1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-204ENST00000460828 ANKRD30AQ9BXX3 1397 aa26.53■■□□□ 1.84
PCMT1-204ENST00000460828 PPP1R15AO75807 674 aaPredicted RBP26.52■■□□□ 1.84
PCMT1-204ENST00000460828 NOS1P29475 1434 aa26.52■■□□□ 1.84
PCMT1-204ENST00000460828 COL16A1Q07092 1604 aaPredicted RBP26.52■■□□□ 1.84
PCMT1-204ENST00000460828 CHIC2Q9UKJ5 165 aa26.52■■□□□ 1.84
PCMT1-204ENST00000460828 CHD2O14647 1828 aaKnown RBP26.5■■□□□ 1.83
PCMT1-204ENST00000460828 MYO5BQ9ULV0 1848 aa26.5■■□□□ 1.83
PCMT1-204ENST00000460828 GCC2Q8IWJ2 1684 aa26.5■■□□□ 1.83
PCMT1-204ENST00000460828 C14orf37Q86TY3 774 aa26.49■■□□□ 1.83
PCMT1-204ENST00000460828 SLC52A1Q9NWF4 448 aa26.49■■□□□ 1.83
PCMT1-204ENST00000460828 APLP2Q06481 763 aa26.46■■□□□ 1.83
PCMT1-204ENST00000460828 FGD6Q6ZV73 1430 aa26.46■■□□□ 1.83
PCMT1-204ENST00000460828 PLEKHG1Q9ULL1 1385 aa26.46■■□□□ 1.83
PCMT1-204ENST00000460828 TRIM52Q96A61 297 aa26.45■■□□□ 1.82
PCMT1-204ENST00000460828 LRP6O75581 1613 aa26.45■■□□□ 1.82
PCMT1-204ENST00000460828 RIMS2Q9UQ26 1411 aa26.44■■□□□ 1.82
PCMT1-204ENST00000460828 SPATA31A6Q5VVP1 1343 aa26.43■■□□□ 1.82
PCMT1-204ENST00000460828 ZNF772Q68DY9 489 aaPredicted RBP26.43■■□□□ 1.82
PCMT1-204ENST00000460828 ZFYVE9O95405 1425 aa26.42■■□□□ 1.82
PCMT1-204ENST00000460828 HDGFP51858 240 aaKnown RBP26.42■■□□□ 1.82
PCMT1-204ENST00000460828 RPRD2Q5VT52 1461 aaKnown RBP26.42■■□□□ 1.82
PCMT1-204ENST00000460828 SHPRHQ149N8 1683 aa26.41■■□□□ 1.82
PCMT1-204ENST00000460828 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.81
PCMT1-204ENST00000460828 AHDC1Q5TGY3 1603 aaPredicted RBP26.39■■□□□ 1.81
PCMT1-204ENST00000460828 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
PCMT1-204ENST00000460828 UPF1Q92900 1129 aaKnown RBP eCLIP26.38■■□□□ 1.81
PCMT1-204ENST00000460828 TMEM131LA2VDJ0 1609 aa26.38■■□□□ 1.81
PCMT1-204ENST00000460828 CHGAP10645 457 aaKnown RBP26.37■■□□□ 1.81
PCMT1-204ENST00000460828 ATF3P18847 181 aa26.37■■□□□ 1.81
PCMT1-204ENST00000460828 NCOA3Q9Y6Q9 1424 aa26.37■■□□□ 1.81
PCMT1-204ENST00000460828 CADPS2Q86UW7 1296 aa26.36■■□□□ 1.81
PCMT1-204ENST00000460828 DIP2AQ14689 1571 aa26.36■■□□□ 1.81
PCMT1-204ENST00000460828 ADGRL2O95490 1459 aa26.35■■□□□ 1.81
PCMT1-204ENST00000460828 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.33■■□□□ 1.81
PCMT1-204ENST00000460828 TBX22Q9Y458 520 aa26.32■■□□□ 1.8
PCMT1-204ENST00000460828 ANKRD50Q9ULJ7 1429 aa26.31■■□□□ 1.8
PCMT1-204ENST00000460828 RXRBP28702 533 aa26.31■■□□□ 1.8
PCMT1-204ENST00000460828 NUTM2BA6NNL0 878 aaPredicted RBP26.3■■□□□ 1.8
PCMT1-204ENST00000460828 NUTM2EB1AL46 878 aaPredicted RBP26.3■■□□□ 1.8
PCMT1-204ENST00000460828 NUTM2DQ5VT03 806 aaPredicted RBP26.3■■□□□ 1.8
PCMT1-204ENST00000460828 NUTM2AQ8IVF1 878 aaPredicted RBP26.3■■□□□ 1.8
PCMT1-204ENST00000460828 C19orf44Q9H6X5 657 aa26.29■■□□□ 1.8
PCMT1-204ENST00000460828 TRPM2O94759 1503 aa26.29■■□□□ 1.8
PCMT1-204ENST00000460828 FAM50AQ14320 339 aaKnown RBP26.27■■□□□ 1.8
PCMT1-204ENST00000460828 ADAMTS13Q76LX8 1427 aa26.27■■□□□ 1.8
PCMT1-204ENST00000460828 PIK3R4Q99570 1358 aa26.25■■□□□ 1.79
PCMT1-204ENST00000460828 UNC13BO14795 1591 aa26.24■■□□□ 1.79
PCMT1-204ENST00000460828 CDK12Q9NYV4 1490 aaPredicted RBP26.23■■□□□ 1.79
PCMT1-204ENST00000460828 E9PCH4 1651 aa26.23■■□□□ 1.79
PCMT1-204ENST00000460828 AFF2P51816 1311 aa26.22■■□□□ 1.79
PCMT1-204ENST00000460828 BRINP3Q76B58 766 aa26.22■■□□□ 1.79
PCMT1-204ENST00000460828 ASXL1Q8IXJ9 1541 aa26.21■■□□□ 1.79
PCMT1-204ENST00000460828 AMOTL2Q9Y2J4 779 aa26.19■■□□□ 1.78
PCMT1-204ENST00000460828 DCCP43146 1447 aa26.19■■□□□ 1.78
PCMT1-204ENST00000460828 NHSL1Q5SYE7 1610 aa26.17■■□□□ 1.78
PCMT1-204ENST00000460828 PTPRUQ92729 1446 aa26.15■■□□□ 1.78
PCMT1-204ENST00000460828 C8orf37Q96NL8 207 aa26.14■■□□□ 1.78
PCMT1-204ENST00000460828 XRN1Q8IZH2 1706 aaKnown RBP26.14■■□□□ 1.77
PCMT1-204ENST00000460828 IQGAP3Q86VI3 1631 aa26.14■■□□□ 1.77
PCMT1-204ENST00000460828 SETD5Q9C0A6 1442 aa26.14■■□□□ 1.77
PCMT1-204ENST00000460828 RGS12O14924 1447 aa26.13■■□□□ 1.77
PCMT1-204ENST00000460828 MST1RQ04912 1400 aa26.12■■□□□ 1.77
PCMT1-204ENST00000460828 LRRC59Q96AG4 307 aaKnown RBP26.1■■□□□ 1.77
PCMT1-204ENST00000460828 NRXN3Q9Y4C0 1643 aa26.08■■□□□ 1.77
PCMT1-204ENST00000460828 QTRT2Q9H974 415 aaKnown RBP26.08■■□□□ 1.77
PCMT1-204ENST00000460828 RBM6P78332 1123 aaKnown RBP26.07■■□□□ 1.76
PCMT1-204ENST00000460828 SETBP1Q9Y6X0 1596 aa26.07■■□□□ 1.76
PCMT1-204ENST00000460828 PNPLA6Q8IY17 1366 aa26.05■■□□□ 1.76
PCMT1-204ENST00000460828 ZNF326Q5BKZ1 582 aaKnown RBP26.04■■□□□ 1.76
PCMT1-204ENST00000460828 NALCNQ8IZF0 1738 aa26.04■■□□□ 1.76
PCMT1-204ENST00000460828 DDX17Q92841 729 aaKnown RBP26.03■■□□□ 1.76
PCMT1-204ENST00000460828 ADGRL3Q9HAR2 1447 aa26.03■■□□□ 1.76
PCMT1-204ENST00000460828 SPHKAPQ2M3C7 1700 aa26.02■■□□□ 1.76
PCMT1-204ENST00000460828 NUP155O75694 1391 aa26.02■■□□□ 1.76
PCMT1-204ENST00000460828 ADAMTS2O95450 1211 aa26.01■■□□□ 1.75
PCMT1-204ENST00000460828 SRCAPQ6ZRS2 3230 aa26.01■■□□□ 1.75
PCMT1-204ENST00000460828 NGLY1Q96IV0 654 aa26■■□□□ 1.75
PCMT1-204ENST00000460828 ATAD2Q6PL18 1390 aa25.99■■□□□ 1.75
PCMT1-204ENST00000460828 METP08581 1390 aa25.97■■□□□ 1.75
PCMT1-204ENST00000460828 ROCK1Q13464 1354 aa25.97■■□□□ 1.75
PCMT1-204ENST00000460828 FOXD1Q16676 465 aa25.95■■□□□ 1.74
PCMT1-204ENST00000460828 USP21Q9UK80 565 aa25.92■■□□□ 1.74
PCMT1-204ENST00000460828 C1orf167Q5SNV9 1468 aa25.91■■□□□ 1.74
PCMT1-204ENST00000460828 ITGAEP38570 1179 aa25.9■■□□□ 1.74
PCMT1-204ENST00000460828 NEXMIFQ5QGS0 1516 aa25.89■■□□□ 1.74
PCMT1-204ENST00000460828 TRPC5Q9UL62 973 aaPredicted RBP25.89■■□□□ 1.74
PCMT1-204ENST00000460828 LAMC1P11047 1609 aa25.88■■□□□ 1.73
PCMT1-204ENST00000460828 ZRANB1Q9UGI0 708 aa25.87■■□□□ 1.73
PCMT1-204ENST00000460828 CLTCL1P53675 1640 aa25.87■■□□□ 1.73
PCMT1-204ENST00000460828 PTCH1Q13635 1447 aa25.86■■□□□ 1.73
PCMT1-204ENST00000460828 KIF1BO60333 1816 aa25.86■■□□□ 1.73
PCMT1-204ENST00000460828 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
PCMT1-204ENST00000460828 SOS2Q07890 1332 aaPredicted RBP25.82■■□□□ 1.72
PCMT1-204ENST00000460828 COL22A1Q8NFW1 1626 aaPredicted RBP25.81■■□□□ 1.72
PCMT1-204ENST00000460828 ATRNO75882 1429 aa25.8■■□□□ 1.72
PCMT1-204ENST00000460828 FNBP4Q8N3X1 1017 aaPredicted RBP25.78■■□□□ 1.72
PCMT1-204ENST00000460828 ROBO2Q9HCK4 1378 aa25.77■■□□□ 1.72
PCMT1-204ENST00000460828 MARF1Q9Y4F3 1742 aaKnown RBP25.77■■□□□ 1.72
PCMT1-204ENST00000460828 EP400Q96L91 3159 aa25.75■■□□□ 1.71
PCMT1-204ENST00000460828 MYOM2P54296 1465 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms