RNA–Protein interactions for RNA: ENST00000460741.1

HOMER1-203, Transcript of homer scaffold protein 1, humanhuman

TSL 2

Gene HOMER1, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-203ENST00000460741 MCM6Q14566 821 aa10.9□□□□□ -0.66
HOMER1-203ENST00000460741 Q6ZNB5 142 aa10.9□□□□□ -0.66
HOMER1-203ENST00000460741 REPIN1Q9BWE0 567 aaKnown RBP10.9□□□□□ -0.66
HOMER1-203ENST00000460741 PRIM1P49642 420 aaKnown RBP10.89□□□□□ -0.67
HOMER1-203ENST00000460741 NECTIN2Q92692 538 aa10.89□□□□□ -0.67
HOMER1-203ENST00000460741 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
HOMER1-203ENST00000460741 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
HOMER1-203ENST00000460741 ITGBL1O95965 494 aaPredicted RBP10.88□□□□□ -0.67
HOMER1-203ENST00000460741 PTGDRQ13258 359 aa10.85□□□□□ -0.67
HOMER1-203ENST00000460741 SH3D19Q5HYK7 790 aa10.85□□□□□ -0.67
HOMER1-203ENST00000460741 CCDC9Q9Y3X0 531 aaKnown RBP10.85□□□□□ -0.67
HOMER1-203ENST00000460741 ZNF777Q9ULD5 760 aaPredicted RBP10.84□□□□□ -0.67
HOMER1-203ENST00000460741 PROSER2Q86WR7 435 aaPredicted RBP10.83□□□□□ -0.68
HOMER1-203ENST00000460741 POM121Q96HA1 1249 aa10.82□□□□□ -0.68
HOMER1-203ENST00000460741 C6orf132Q5T0Z8 1188 aa10.81□□□□□ -0.68
HOMER1-203ENST00000460741 ANKK1Q8NFD2 765 aa10.8□□□□□ -0.68
HOMER1-203ENST00000460741 COL9A1P20849 921 aa10.79□□□□□ -0.68
HOMER1-203ENST00000460741 MDM2Q00987 491 aaPredicted RBP10.79□□□□□ -0.68
HOMER1-203ENST00000460741 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
HOMER1-203ENST00000460741 RBM33Q96EV2 1170 aaKnown RBP10.79□□□□□ -0.68
HOMER1-203ENST00000460741 ATP1B4Q9UN42 357 aaPredicted RBP10.79□□□□□ -0.68
HOMER1-203ENST00000460741 CLCN1P35523 988 aa10.78□□□□□ -0.68
HOMER1-203ENST00000460741 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
HOMER1-203ENST00000460741 CDHR5Q9HBB8 845 aa10.78□□□□□ -0.68
HOMER1-203ENST00000460741 RABGEF1Q9UJ41 708 aa10.78□□□□□ -0.68
HOMER1-203ENST00000460741 MAP3K7O43318 606 aa10.77□□□□□ -0.69
HOMER1-203ENST00000460741 LAPTM4AQ15012 233 aa10.77□□□□□ -0.69
HOMER1-203ENST00000460741 CCDC97Q96F63 343 aaPredicted RBP10.77□□□□□ -0.69
HOMER1-203ENST00000460741 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
HOMER1-203ENST00000460741 NYAP1Q6ZVC0 841 aa10.76□□□□□ -0.69
HOMER1-203ENST00000460741 PROCA1Q8NCQ7 364 aaPredicted RBP10.76□□□□□ -0.69
HOMER1-203ENST00000460741 GPCPD1Q9NPB8 672 aa10.76□□□□□ -0.69
HOMER1-203ENST00000460741 RAD21O60216 631 aa10.75□□□□□ -0.69
HOMER1-203ENST00000460741 PROX2Q3B8N5 592 aa10.75□□□□□ -0.69
HOMER1-203ENST00000460741 FNBP4Q8N3X1 1017 aaPredicted RBP10.75□□□□□ -0.69
HOMER1-203ENST00000460741 SSTR3P32745 418 aaPredicted RBP10.74□□□□□ -0.69
HOMER1-203ENST00000460741 PHOX2BQ99453 314 aa10.74□□□□□ -0.69
HOMER1-203ENST00000460741 LAPTM4BQ86VI4 370 aa10.73□□□□□ -0.69
HOMER1-203ENST00000460741 BEGAINQ9BUH8 593 aa10.73□□□□□ -0.69
HOMER1-203ENST00000460741 POLR3EQ9NVU0 708 aa10.73□□□□□ -0.69
HOMER1-203ENST00000460741 SERPINA10Q9UK55 444 aa10.73□□□□□ -0.69
HOMER1-203ENST00000460741 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
HOMER1-203ENST00000460741 BCAMP50895 628 aa10.72□□□□□ -0.69
HOMER1-203ENST00000460741 KCNC4Q03721 635 aa10.72□□□□□ -0.69
HOMER1-203ENST00000460741 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
HOMER1-203ENST00000460741 TRAIPQ9BWF2 469 aa10.72□□□□□ -0.69
HOMER1-203ENST00000460741 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
HOMER1-203ENST00000460741 LCE2BO14633 110 aa10.71□□□□□ -0.69
HOMER1-203ENST00000460741 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.69
HOMER1-203ENST00000460741 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
HOMER1-203ENST00000460741 TSR1Q2NL82 804 aaKnown RBP10.7□□□□□ -0.7
HOMER1-203ENST00000460741 KIAA1468Q9P260 1216 aa10.7□□□□□ -0.7
HOMER1-203ENST00000460741 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
HOMER1-203ENST00000460741 COG6Q9Y2V7 657 aa10.69□□□□□ -0.7
HOMER1-203ENST00000460741 TRAF7Q6Q0C0 670 aa10.68□□□□□ -0.7
HOMER1-203ENST00000460741 AEBP1Q8IUX7 1158 aa10.68□□□□□ -0.7
HOMER1-203ENST00000460741 PACS2Q86VP3 889 aa10.67□□□□□ -0.7
HOMER1-203ENST00000460741 FAM217BQ9NTX9 383 aaPredicted RBP10.67□□□□□ -0.7
HOMER1-203ENST00000460741 SPDYE5A6NIY4 337 aa10.66□□□□□ -0.7
HOMER1-203ENST00000460741 FAM161AQ3B820 660 aa10.66□□□□□ -0.7
HOMER1-203ENST00000460741 MYSM1Q5VVJ2 828 aa10.66□□□□□ -0.7
HOMER1-203ENST00000460741 ZFRQ96KR1 1074 aaKnown RBP10.66□□□□□ -0.7
HOMER1-203ENST00000460741 WBP1LQ9NX94 342 aa10.66□□□□□ -0.7
HOMER1-203ENST00000460741 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.65□□□□□ -0.7
HOMER1-203ENST00000460741 SNRKQ9NRH2 765 aa10.65□□□□□ -0.7
HOMER1-203ENST00000460741 GFRA3O60609 400 aa10.64□□□□□ -0.71
HOMER1-203ENST00000460741 CLK2P49760 499 aaKnown RBP10.64□□□□□ -0.71
HOMER1-203ENST00000460741 PRSS12P56730 875 aa10.64□□□□□ -0.71
HOMER1-203ENST00000460741 FAM98CQ17RN3 349 aaKnown RBP10.64□□□□□ -0.71
HOMER1-203ENST00000460741 RETREG2Q8NC44 543 aa10.64□□□□□ -0.71
HOMER1-203ENST00000460741 CDCA7LQ96GN5 454 aa10.64□□□□□ -0.71
HOMER1-203ENST00000460741 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
HOMER1-203ENST00000460741 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
HOMER1-203ENST00000460741 SEPT9Q9UHD8 586 aaPredicted RBP10.62□□□□□ -0.71
HOMER1-203ENST00000460741 TSKSQ9UJT2 592 aa10.62□□□□□ -0.71
HOMER1-203ENST00000460741 RFC5P40937 340 aa10.61□□□□□ -0.71
HOMER1-203ENST00000460741 METTL3Q86U44 580 aaKnown RBP10.61□□□□□ -0.71
HOMER1-203ENST00000460741 NBPF26B4DH59 902 aa10.6□□□□□ -0.71
HOMER1-203ENST00000460741 FBXO31Q5XUX0 539 aaPredicted RBP10.6□□□□□ -0.71
HOMER1-203ENST00000460741 BANK1Q8NDB2 785 aa10.59□□□□□ -0.71
HOMER1-203ENST00000460741 TBC1D2Q9BYX2 928 aa10.58□□□□□ -0.72
HOMER1-203ENST00000460741 NRG2O14511 850 aaPredicted RBP10.57□□□□□ -0.72
HOMER1-203ENST00000460741 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
HOMER1-203ENST00000460741 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
HOMER1-203ENST00000460741 LRCH3Q96II8 777 aa10.56□□□□□ -0.72
HOMER1-203ENST00000460741 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.56□□□□□ -0.72
HOMER1-203ENST00000460741 OATP04181 439 aa10.55□□□□□ -0.72
HOMER1-203ENST00000460741 IRF5Q13568 498 aa10.55□□□□□ -0.72
HOMER1-203ENST00000460741 PXYLP1Q8TE99 480 aa10.55□□□□□ -0.72
HOMER1-203ENST00000460741 GDPD2Q9HCC8 539 aa10.55□□□□□ -0.72
HOMER1-203ENST00000460741 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
HOMER1-203ENST00000460741 TATDN2Q93075 761 aa10.54□□□□□ -0.72
HOMER1-203ENST00000460741 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
HOMER1-203ENST00000460741 PNMA3Q9UL41 463 aa10.54□□□□□ -0.72
HOMER1-203ENST00000460741 HPS5Q9UPZ3 1129 aa10.54□□□□□ -0.72
HOMER1-203ENST00000460741 ADGRG1Q9Y653 693 aa10.54□□□□□ -0.72
HOMER1-203ENST00000460741 TMCO4Q5TGY1 634 aa10.53□□□□□ -0.72
HOMER1-203ENST00000460741 MTMR14Q8NCE2 650 aa10.53□□□□□ -0.72
HOMER1-203ENST00000460741 TMEM259Q4ZIN3 620 aa10.52□□□□□ -0.73
HOMER1-203ENST00000460741 TTC13Q8NBP0 860 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms