RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 NEXMIFQ5QGS0 1516 aa15.37■□□□□ 0.05
UPK1B-202ENST00000460625 NRXN1Q9ULB1 1477 aa15.37■□□□□ 0.05
UPK1B-202ENST00000460625 NUTM2DQ5VT03 806 aaPredicted RBP15.37■□□□□ 0.05
UPK1B-202ENST00000460625 STAC3Q96MF2 364 aa15.37■□□□□ 0.05
UPK1B-202ENST00000460625 GPRASP1Q5JY77 1395 aa15.36■□□□□ 0.05
UPK1B-202ENST00000460625 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
UPK1B-202ENST00000460625 TNRQ92752 1358 aa15.35■□□□□ 0.05
UPK1B-202ENST00000460625 RPGRIP1LQ68CZ1 1315 aa15.35■□□□□ 0.05
UPK1B-202ENST00000460625 C11orf95C9JLR9 678 aaPredicted RBP15.33■□□□□ 0.05
UPK1B-202ENST00000460625 A2ML1A8K2U0 1454 aa15.33■□□□□ 0.05
UPK1B-202ENST00000460625 RIMS1Q86UR5 1692 aaKnown RBP15.33■□□□□ 0.04
UPK1B-202ENST00000460625 LAMC1P11047 1609 aa15.33■□□□□ 0.04
UPK1B-202ENST00000460625 ADAMTSL3P82987 1691 aa15.33■□□□□ 0.04
UPK1B-202ENST00000460625 CFAP70Q5T0N1 1121 aa15.33■□□□□ 0.04
UPK1B-202ENST00000460625 KIAA1210Q9ULL0 1709 aa15.32■□□□□ 0.04
UPK1B-202ENST00000460625 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
UPK1B-202ENST00000460625 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
UPK1B-202ENST00000460625 WASHC2AQ641Q2 1341 aa15.3■□□□□ 0.04
UPK1B-202ENST00000460625 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
UPK1B-202ENST00000460625 DDX10Q13206 875 aaKnown RBP15.29■□□□□ 0.04
UPK1B-202ENST00000460625 VGFO15240 615 aaPredicted RBP15.29■□□□□ 0.04
UPK1B-202ENST00000460625 SENP3Q9H4L4 574 aaPredicted RBP15.29■□□□□ 0.04
UPK1B-202ENST00000460625 UBR1Q8IWV7 1749 aa15.28■□□□□ 0.04
UPK1B-202ENST00000460625 IQGAP1P46940 1657 aa15.28■□□□□ 0.04
UPK1B-202ENST00000460625 ZFYVE9O95405 1425 aa15.28■□□□□ 0.04
UPK1B-202ENST00000460625 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.03
UPK1B-202ENST00000460625 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
UPK1B-202ENST00000460625 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
UPK1B-202ENST00000460625 NLRP1Q9C000 1473 aa15.26■□□□□ 0.03
UPK1B-202ENST00000460625 KDM5AP29375 1690 aaKnown RBP15.26■□□□□ 0.03
UPK1B-202ENST00000460625 CCDC7Q96M83 1385 aa15.26■□□□□ 0.03
UPK1B-202ENST00000460625 KIF7Q2M1P5 1343 aa15.25■□□□□ 0.03
UPK1B-202ENST00000460625 ADGRB1O14514 1584 aa15.25■□□□□ 0.03
UPK1B-202ENST00000460625 SCAF11Q99590 1463 aaKnown RBP15.25■□□□□ 0.03
UPK1B-202ENST00000460625 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
UPK1B-202ENST00000460625 MYO3AQ8NEV4 1616 aa15.24■□□□□ 0.03
UPK1B-202ENST00000460625 TMEM132EQ6IEE7 984 aa15.23■□□□□ 0.03
UPK1B-202ENST00000460625 TESK2Q96S53 571 aa15.22■□□□□ 0.03
UPK1B-202ENST00000460625 MIER1Q8N108 512 aa15.21■□□□□ 0.03
UPK1B-202ENST00000460625 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.03
UPK1B-202ENST00000460625 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.03
UPK1B-202ENST00000460625 ALKQ9UM73 1620 aa15.2■□□□□ 0.02
UPK1B-202ENST00000460625 NRXN3Q9Y4C0 1643 aa15.19■□□□□ 0.02
UPK1B-202ENST00000460625 PTPRMP28827 1452 aa15.18■□□□□ 0.02
UPK1B-202ENST00000460625 POLR3GLQ9BT43 218 aa15.18■□□□□ 0.02
UPK1B-202ENST00000460625 TRAK1Q9UPV9 953 aa15.18■□□□□ 0.02
UPK1B-202ENST00000460625 SETD1AO15047 1707 aaKnown RBP15.18■□□□□ 0.02
UPK1B-202ENST00000460625 DISP3Q9P2K9 1392 aa15.18■□□□□ 0.02
UPK1B-202ENST00000460625 LTKP29376 864 aa15.17■□□□□ 0.02
UPK1B-202ENST00000460625 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
UPK1B-202ENST00000460625 CEP170BQ9Y4F5 1589 aaPredicted RBP15.17■□□□□ 0.02
UPK1B-202ENST00000460625 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
UPK1B-202ENST00000460625 SLIT1O75093 1534 aa15.16■□□□□ 0.02
UPK1B-202ENST00000460625 ARHGAP23Q9P227 1491 aa15.15■□□□□ 0.02
UPK1B-202ENST00000460625 ARHGEF28Q8N1W1 1705 aaKnown RBP15.15■□□□□ 0.02
UPK1B-202ENST00000460625 SETD1BQ9UPS6 1966 aaKnown RBP15.15■□□□□ 0.02
UPK1B-202ENST00000460625 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
UPK1B-202ENST00000460625 HDGFP51858 240 aaKnown RBP15.13■□□□□ 0.01
UPK1B-202ENST00000460625 TXNDC2Q86VQ3 553 aa15.13■□□□□ 0.01
UPK1B-202ENST00000460625 THEMISQ8N1K5 641 aaPredicted RBP15.13■□□□□ 0.01
UPK1B-202ENST00000460625 STK26Q9P289 416 aa15.13■□□□□ 0.01
UPK1B-202ENST00000460625 YTHDC2Q9H6S0 1430 aaKnown RBP15.12■□□□□ 0.01
UPK1B-202ENST00000460625 TMF1P82094 1093 aa15.12■□□□□ 0.01
UPK1B-202ENST00000460625 CENPJQ9HC77 1338 aaPredicted RBP15.12■□□□□ 0.01
UPK1B-202ENST00000460625 QRICH2Q9H0J4 1663 aa15.11■□□□□ 0.01
UPK1B-202ENST00000460625 METP08581 1390 aa15.11■□□□□ 0.01
UPK1B-202ENST00000460625 PLEKHG1Q9ULL1 1385 aa15.11■□□□□ 0.01
UPK1B-202ENST00000460625 ADAMTS13Q76LX8 1427 aa15.11■□□□□ 0.01
UPK1B-202ENST00000460625 BCANQ96GW7 911 aa15.1■□□□□ 0.01
UPK1B-202ENST00000460625 EID1Q9Y6B2 187 aa15.09■□□□□ 0.01
UPK1B-202ENST00000460625 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
UPK1B-202ENST00000460625 SBNO2Q9Y2G9 1366 aa15.08■□□□□ 0
UPK1B-202ENST00000460625 SAFB2Q14151 953 aaKnown RBP eCLIP15.07■□□□□ 0
UPK1B-202ENST00000460625 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
UPK1B-202ENST00000460625 MED14O60244 1454 aa15.07■□□□□ 0
UPK1B-202ENST00000460625 SLC26A8Q96RN1 970 aa15.06■□□□□ 0
UPK1B-202ENST00000460625 PRAM1Q96QH2 718 aa15.05■□□□□ 0
UPK1B-202ENST00000460625 ANP32CO43423 234 aa15.04■□□□□ -0
UPK1B-202ENST00000460625 ABCC11Q96J66 1382 aa15.04■□□□□ -0
UPK1B-202ENST00000460625 DLC1Q96QB1 1528 aa15.04■□□□□ -0
UPK1B-202ENST00000460625 MYOM1P52179 1685 aa15.04■□□□□ -0
UPK1B-202ENST00000460625 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
UPK1B-202ENST00000460625 PLEKHH1Q9ULM0 1364 aa15.03■□□□□ -0
UPK1B-202ENST00000460625 TULP4Q9NRJ4 1543 aa15.03■□□□□ -0
UPK1B-202ENST00000460625 KNDC1Q76NI1 1749 aa15.02■□□□□ -0
UPK1B-202ENST00000460625 PTPRUQ92729 1446 aa15.02■□□□□ -0
UPK1B-202ENST00000460625 CDCA8Q53HL2 280 aa15.02■□□□□ -0
UPK1B-202ENST00000460625 POGKQ9P215 609 aa15.02■□□□□ -0
UPK1B-202ENST00000460625 ANKLE2Q86XL3 938 aa15.02□□□□□ -0.01
UPK1B-202ENST00000460625 MINK1Q8N4C8 1332 aaPredicted RBP15.01□□□□□ -0.01
UPK1B-202ENST00000460625 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
UPK1B-202ENST00000460625 TECPR2O15040 1411 aa15.01□□□□□ -0.01
UPK1B-202ENST00000460625 PANK3Q9H999 370 aa15□□□□□ -0.01
UPK1B-202ENST00000460625 TBX22Q9Y458 520 aa15□□□□□ -0.01
UPK1B-202ENST00000460625 CPS1P31327 1500 aa15□□□□□ -0.01
UPK1B-202ENST00000460625 ROBO2Q9HCK4 1378 aa14.99□□□□□ -0.01
UPK1B-202ENST00000460625 DIP2AQ14689 1571 aa14.99□□□□□ -0.01
UPK1B-202ENST00000460625 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
UPK1B-202ENST00000460625 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
UPK1B-202ENST00000460625 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms