RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 CFAP70Q5T0N1 1121 aa20.32■□□□□ 0.84
PCNP-202ENST00000460231 NEXMIFQ5QGS0 1516 aa20.32■□□□□ 0.84
PCNP-202ENST00000460231 USP47Q96K76 1375 aa20.31■□□□□ 0.84
PCNP-202ENST00000460231 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.844e-6■■■□□ 16
PCNP-202ENST00000460231 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
PCNP-202ENST00000460231 RIMS1Q86UR5 1692 aaKnown RBP20.28■□□□□ 0.84
PCNP-202ENST00000460231 A2ML1A8K2U0 1454 aa20.27■□□□□ 0.84
PCNP-202ENST00000460231 MYOM2P54296 1465 aa20.27■□□□□ 0.84
PCNP-202ENST00000460231 NRXN1Q9ULB1 1477 aa20.27■□□□□ 0.84
PCNP-202ENST00000460231 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.84
PCNP-202ENST00000460231 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.83
PCNP-202ENST00000460231 TNRQ92752 1358 aa20.26■□□□□ 0.83
PCNP-202ENST00000460231 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
PCNP-202ENST00000460231 ADAMTSL3P82987 1691 aa20.25■□□□□ 0.83
PCNP-202ENST00000460231 GPRASP1Q5JY77 1395 aa20.25■□□□□ 0.83
PCNP-202ENST00000460231 PIK3C2GO75747 1445 aa20.24■□□□□ 0.83
PCNP-202ENST00000460231 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
PCNP-202ENST00000460231 STAG3Q9UJ98 1225 aa20.22■□□□□ 0.83
PCNP-202ENST00000460231 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
PCNP-202ENST00000460231 KIF7Q2M1P5 1343 aa20.18■□□□□ 0.82
PCNP-202ENST00000460231 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
PCNP-202ENST00000460231 MIER1Q8N108 512 aa20.17■□□□□ 0.82
PCNP-202ENST00000460231 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
PCNP-202ENST00000460231 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
PCNP-202ENST00000460231 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
PCNP-202ENST00000460231 IQGAP1P46940 1657 aa20.16■□□□□ 0.82
PCNP-202ENST00000460231 TESK2Q96S53 571 aa20.16■□□□□ 0.82
PCNP-202ENST00000460231 ADGRB1O14514 1584 aa20.16■□□□□ 0.82
PCNP-202ENST00000460231 ASXL1Q8IXJ9 1541 aa20.15■□□□□ 0.82
PCNP-202ENST00000460231 LAMC1P11047 1609 aa20.15■□□□□ 0.82
PCNP-202ENST00000460231 CCDC7Q96M83 1385 aa20.14■□□□□ 0.82
PCNP-202ENST00000460231 VGFO15240 615 aaPredicted RBP20.14■□□□□ 0.81
PCNP-202ENST00000460231 LTKP29376 864 aa20.14■□□□□ 0.81
PCNP-202ENST00000460231 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.81
PCNP-202ENST00000460231 STAC3Q96MF2 364 aa20.13■□□□□ 0.81
PCNP-202ENST00000460231 POLR3GLQ9BT43 218 aa20.12■□□□□ 0.81
PCNP-202ENST00000460231 MYO3AQ8NEV4 1616 aa20.12■□□□□ 0.81
PCNP-202ENST00000460231 PTPRMP28827 1452 aa20.12■□□□□ 0.81
PCNP-202ENST00000460231 TRAK1Q9UPV9 953 aa20.12■□□□□ 0.81
PCNP-202ENST00000460231 DISP3Q9P2K9 1392 aa20.12■□□□□ 0.81
PCNP-202ENST00000460231 TMEM2Q9UHN6 1383 aa20.11■□□□□ 0.81
PCNP-202ENST00000460231 NRXN3Q9Y4C0 1643 aa20.1■□□□□ 0.81
PCNP-202ENST00000460231 SCAF11Q99590 1463 aaKnown RBP20.1■□□□□ 0.81
PCNP-202ENST00000460231 NLRP1Q9C000 1473 aa20.09■□□□□ 0.81
PCNP-202ENST00000460231 ALKQ9UM73 1620 aa20.08■□□□□ 0.81
PCNP-202ENST00000460231 STK26Q9P289 416 aa20.08■□□□□ 0.8
PCNP-202ENST00000460231 SETD1AO15047 1707 aaKnown RBP20.06■□□□□ 0.8
PCNP-202ENST00000460231 KDM4FA0A1W2PPD8 638 aa20.06■□□□□ 0.8
PCNP-202ENST00000460231 POLR1AO95602 1720 aaPredicted RBP20.06■□□□□ 0.8
PCNP-202ENST00000460231 SETBP1Q9Y6X0 1596 aa20.05■□□□□ 0.8
PCNP-202ENST00000460231 METP08581 1390 aa20.04■□□□□ 0.8
PCNP-202ENST00000460231 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
PCNP-202ENST00000460231 KDM5AP29375 1690 aaKnown RBP20.04■□□□□ 0.8
PCNP-202ENST00000460231 SAFB2Q14151 953 aaKnown RBP eCLIP20.03■□□□□ 0.8
PCNP-202ENST00000460231 TXNDC2Q86VQ3 553 aa20.02■□□□□ 0.8
PCNP-202ENST00000460231 ARHGAP23Q9P227 1491 aa20.01■□□□□ 0.79
PCNP-202ENST00000460231 SLC26A8Q96RN1 970 aa20■□□□□ 0.79
PCNP-202ENST00000460231 ARHGEF28Q8N1W1 1705 aaKnown RBP20■□□□□ 0.79
PCNP-202ENST00000460231 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
PCNP-202ENST00000460231 SLIT1O75093 1534 aa19.99■□□□□ 0.79
PCNP-202ENST00000460231 YTHDC2Q9H6S0 1430 aaKnown RBP19.98■□□□□ 0.79
PCNP-202ENST00000460231 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
PCNP-202ENST00000460231 BCANQ96GW7 911 aa19.97■□□□□ 0.79
PCNP-202ENST00000460231 PLEKHH1Q9ULM0 1364 aa19.97■□□□□ 0.79
PCNP-202ENST00000460231 SETD1BQ9UPS6 1966 aaKnown RBP19.96■□□□□ 0.79
PCNP-202ENST00000460231 WAPLQ7Z5K2 1190 aa19.95■□□□□ 0.78
PCNP-202ENST00000460231 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
PCNP-202ENST00000460231 CENPJQ9HC77 1338 aaPredicted RBP19.95■□□□□ 0.78
PCNP-202ENST00000460231 QRICH2Q9H0J4 1663 aa19.95■□□□□ 0.78
PCNP-202ENST00000460231 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.95■□□□□ 0.78
PCNP-202ENST00000460231 ZNF142P52746 1687 aaPredicted RBP19.95■□□□□ 0.78
PCNP-202ENST00000460231 PRAM1Q96QH2 718 aa19.94■□□□□ 0.78
PCNP-202ENST00000460231 PLEKHG1Q9ULL1 1385 aa19.93■□□□□ 0.78
PCNP-202ENST00000460231 PTPRUQ92729 1446 aa19.92■□□□□ 0.78
PCNP-202ENST00000460231 TMF1P82094 1093 aa19.92■□□□□ 0.78
PCNP-202ENST00000460231 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
PCNP-202ENST00000460231 MED14O60244 1454 aa19.91■□□□□ 0.78
PCNP-202ENST00000460231 EID1Q9Y6B2 187 aa19.9■□□□□ 0.78
PCNP-202ENST00000460231 MINK1Q8N4C8 1332 aaPredicted RBP19.9■□□□□ 0.78
PCNP-202ENST00000460231 TULP4Q9NRJ4 1543 aa19.89■□□□□ 0.78
PCNP-202ENST00000460231 HSPA2P54652 639 aa19.88■□□□□ 0.77
PCNP-202ENST00000460231 MYOM1P52179 1685 aa19.88■□□□□ 0.77
PCNP-202ENST00000460231 LRPPRCP42704 1394 aaKnown RBP19.87■□□□□ 0.77
PCNP-202ENST00000460231 ROBO2Q9HCK4 1378 aa19.87■□□□□ 0.77
PCNP-202ENST00000460231 NCKAP5LQ9HCH0 1330 aa19.87■□□□□ 0.77
PCNP-202ENST00000460231 HDGFP51858 240 aaKnown RBP19.85■□□□□ 0.77
PCNP-202ENST00000460231 CABP2Q9NPB3 220 aa19.85■□□□□ 0.77
PCNP-202ENST00000460231 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
PCNP-202ENST00000460231 PANK3Q9H999 370 aa19.85■□□□□ 0.77
PCNP-202ENST00000460231 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
PCNP-202ENST00000460231 ABCC11Q96J66 1382 aa19.84■□□□□ 0.77
PCNP-202ENST00000460231 PER1O15534 1290 aaPredicted RBP19.84■□□□□ 0.77
PCNP-202ENST00000460231 POGKQ9P215 609 aa19.83■□□□□ 0.77
PCNP-202ENST00000460231 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.76
PCNP-202ENST00000460231 ANKLE2Q86XL3 938 aa19.81■□□□□ 0.76
PCNP-202ENST00000460231 SLC12A5Q9H2X9 1139 aa19.81■□□□□ 0.76
PCNP-202ENST00000460231 ANP32CO43423 234 aa19.8■□□□□ 0.76
PCNP-202ENST00000460231 AMOTL2Q9Y2J4 779 aa19.8■□□□□ 0.76
PCNP-202ENST00000460231 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
PCNP-202ENST00000460231 TBX22Q9Y458 520 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms