RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 RIMS2Q9UQ26 1411 aa13.54□□□□□ -0.24
PCCB-202ENST00000459873 PCGF6Q9BYE7 350 aa13.53□□□□□ -0.24
PCCB-202ENST00000459873 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.25
PCCB-202ENST00000459873 NPHP4O75161 1426 aaPredicted RBP13.52□□□□□ -0.25
PCCB-202ENST00000459873 NWD1Q149M9 1564 aa13.51□□□□□ -0.25
PCCB-202ENST00000459873 MYOM2P54296 1465 aa13.51□□□□□ -0.25
PCCB-202ENST00000459873 LAMC1P11047 1609 aa13.5□□□□□ -0.25
PCCB-202ENST00000459873 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
PCCB-202ENST00000459873 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
PCCB-202ENST00000459873 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
PCCB-202ENST00000459873 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
PCCB-202ENST00000459873 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
PCCB-202ENST00000459873 XRN1Q8IZH2 1706 aaKnown RBP13.47□□□□□ -0.25
PCCB-202ENST00000459873 LTKP29376 864 aa13.46□□□□□ -0.25
PCCB-202ENST00000459873 ADAMTS13Q76LX8 1427 aa13.46□□□□□ -0.26
PCCB-202ENST00000459873 LTBP4Q8N2S1 1624 aa13.46□□□□□ -0.26
PCCB-202ENST00000459873 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
PCCB-202ENST00000459873 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
PCCB-202ENST00000459873 ANKLE2Q86XL3 938 aa13.45□□□□□ -0.26
PCCB-202ENST00000459873 PIK3C2GO75747 1445 aa13.45□□□□□ -0.26
PCCB-202ENST00000459873 CHD2O14647 1828 aaKnown RBP13.43□□□□□ -0.26
PCCB-202ENST00000459873 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
PCCB-202ENST00000459873 EID1Q9Y6B2 187 aa13.43□□□□□ -0.26
PCCB-202ENST00000459873 ALKQ9UM73 1620 aa13.42□□□□□ -0.26
PCCB-202ENST00000459873 KIAA1210Q9ULL0 1709 aa13.42□□□□□ -0.26
PCCB-202ENST00000459873 TXNDC2Q86VQ3 553 aa13.42□□□□□ -0.26
PCCB-202ENST00000459873 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
PCCB-202ENST00000459873 RPGRIP1LQ68CZ1 1315 aa13.41□□□□□ -0.26
PCCB-202ENST00000459873 CPS1P31327 1500 aa13.41□□□□□ -0.26
PCCB-202ENST00000459873 ZNF326Q5BKZ1 582 aaKnown RBP13.41□□□□□ -0.26
PCCB-202ENST00000459873 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCCB-202ENST00000459873 PRAG1Q86YV5 1406 aa13.4□□□□□ -0.26
PCCB-202ENST00000459873 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
PCCB-202ENST00000459873 XIRP1Q702N8 1843 aaKnown RBP13.4□□□□□ -0.26
PCCB-202ENST00000459873 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
PCCB-202ENST00000459873 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
PCCB-202ENST00000459873 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
PCCB-202ENST00000459873 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
PCCB-202ENST00000459873 PIK3R4Q99570 1358 aa13.36□□□□□ -0.27
PCCB-202ENST00000459873 ADGRF5Q8IZF2 1346 aa13.36□□□□□ -0.27
PCCB-202ENST00000459873 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
PCCB-202ENST00000459873 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
PCCB-202ENST00000459873 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
PCCB-202ENST00000459873 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
PCCB-202ENST00000459873 RGL3Q3MIN7 710 aa13.35□□□□□ -0.27
PCCB-202ENST00000459873 PTPRUQ92729 1446 aa13.35□□□□□ -0.27
PCCB-202ENST00000459873 NALCNQ8IZF0 1738 aa13.35□□□□□ -0.27
PCCB-202ENST00000459873 PTCH1Q13635 1447 aa13.34□□□□□ -0.27
PCCB-202ENST00000459873 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
PCCB-202ENST00000459873 ARHGEF28Q8N1W1 1705 aaKnown RBP13.33□□□□□ -0.27
PCCB-202ENST00000459873 TECPR2O15040 1411 aa13.33□□□□□ -0.28
PCCB-202ENST00000459873 VGFO15240 615 aaPredicted RBP13.33□□□□□ -0.28
PCCB-202ENST00000459873 SLC26A8Q96RN1 970 aa13.33□□□□□ -0.28
PCCB-202ENST00000459873 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
PCCB-202ENST00000459873 METP08581 1390 aa13.32□□□□□ -0.28
PCCB-202ENST00000459873 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
PCCB-202ENST00000459873 TONSLQ96HA7 1378 aa13.31□□□□□ -0.28
PCCB-202ENST00000459873 DLC1Q96QB1 1528 aa13.3□□□□□ -0.28
PCCB-202ENST00000459873 SENP3Q9H4L4 574 aaPredicted RBP13.3□□□□□ -0.28
PCCB-202ENST00000459873 RALGAPBQ86X10 1494 aa13.29□□□□□ -0.28
PCCB-202ENST00000459873 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
PCCB-202ENST00000459873 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
PCCB-202ENST00000459873 YTHDC2Q9H6S0 1430 aaKnown RBP13.28□□□□□ -0.28
PCCB-202ENST00000459873 NEUROD1Q13562 356 aa13.27□□□□□ -0.29
PCCB-202ENST00000459873 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.29
PCCB-202ENST00000459873 BCANQ96GW7 911 aa13.27□□□□□ -0.29
PCCB-202ENST00000459873 ADGRB2O60241 1585 aa13.27□□□□□ -0.29
PCCB-202ENST00000459873 CDC42BPGQ6DT37 1551 aa13.27□□□□□ -0.29
PCCB-202ENST00000459873 KCNA6P17658 529 aa13.26□□□□□ -0.29
PCCB-202ENST00000459873 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
PCCB-202ENST00000459873 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
PCCB-202ENST00000459873 CCER1Q8TC90 406 aaPredicted RBP13.25□□□□□ -0.29
PCCB-202ENST00000459873 TMEM94Q12767 1356 aa13.24□□□□□ -0.29
PCCB-202ENST00000459873 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
PCCB-202ENST00000459873 C14orf93Q9H972 538 aaKnown RBP13.24□□□□□ -0.29
PCCB-202ENST00000459873 QRICH2Q9H0J4 1663 aa13.24□□□□□ -0.29
PCCB-202ENST00000459873 ADGRL3Q9HAR2 1447 aa13.23□□□□□ -0.29
PCCB-202ENST00000459873 NCOA3Q9Y6Q9 1424 aa13.23□□□□□ -0.29
PCCB-202ENST00000459873 GPRASP1Q5JY77 1395 aa13.23□□□□□ -0.29
PCCB-202ENST00000459873 DCCP43146 1447 aa13.22□□□□□ -0.29
PCCB-202ENST00000459873 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
PCCB-202ENST00000459873 ABCC11Q96J66 1382 aa13.22□□□□□ -0.29
PCCB-202ENST00000459873 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
PCCB-202ENST00000459873 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
PCCB-202ENST00000459873 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
PCCB-202ENST00000459873 AMOTL2Q9Y2J4 779 aa13.21□□□□□ -0.29
PCCB-202ENST00000459873 CERKQ8TCT0 537 aa13.2□□□□□ -0.3
PCCB-202ENST00000459873 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
PCCB-202ENST00000459873 TMEM132EQ6IEE7 984 aa13.18□□□□□ -0.3
PCCB-202ENST00000459873 TIMELESSQ9UNS1 1208 aa13.18□□□□□ -0.3
PCCB-202ENST00000459873 ROCK2O75116 1388 aaKnown RBP13.18□□□□□ -0.3
PCCB-202ENST00000459873 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
PCCB-202ENST00000459873 TOPAZ1Q8N9V7 1692 aa13.17□□□□□ -0.3
PCCB-202ENST00000459873 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
PCCB-202ENST00000459873 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
PCCB-202ENST00000459873 MSH6P52701 1360 aa13.16□□□□□ -0.3
PCCB-202ENST00000459873 MST1RQ04912 1400 aa13.14□□□□□ -0.31
PCCB-202ENST00000459873 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
PCCB-202ENST00000459873 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
PCCB-202ENST00000459873 ITSN1Q15811 1721 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms