RNA–Protein interactions for RNA: ENST00000458269.6

STRADB-205, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 5

Gene STRADB, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-205ENST00000458269 NLRP1Q9C000 1473 aa12.09□□□□□ -0.47
STRADB-205ENST00000458269 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
STRADB-205ENST00000458269 POLR1AO95602 1720 aaPredicted RBP12.08□□□□□ -0.47
STRADB-205ENST00000458269 RPRD2Q5VT52 1461 aaKnown RBP12.08□□□□□ -0.47
STRADB-205ENST00000458269 UBR1Q8IWV7 1749 aa12.08□□□□□ -0.48
STRADB-205ENST00000458269 CFAP65Q6ZU64 1925 aaKnown RBP12.07□□□□□ -0.48
STRADB-205ENST00000458269 PIK3C2BO00750 1634 aa12.07□□□□□ -0.48
STRADB-205ENST00000458269 PLA2R1Q13018 1463 aa12.07□□□□□ -0.48
STRADB-205ENST00000458269 KDM5AP29375 1690 aaKnown RBP12.06□□□□□ -0.48
STRADB-205ENST00000458269 HSPA2P54652 639 aa12.06□□□□□ -0.48
STRADB-205ENST00000458269 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
STRADB-205ENST00000458269 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
STRADB-205ENST00000458269 UGGT1Q9NYU2 1555 aa12.05□□□□□ -0.48
STRADB-205ENST00000458269 NOS1P29475 1434 aa12.05□□□□□ -0.48
STRADB-205ENST00000458269 FBXO31Q5XUX0 539 aaPredicted RBP12.05□□□□□ -0.48
STRADB-205ENST00000458269 ADGRB3O60242 1522 aa12.05□□□□□ -0.48
STRADB-205ENST00000458269 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
STRADB-205ENST00000458269 HAX1O00165 279 aa12.04□□□□□ -0.48
STRADB-205ENST00000458269 MYO5BQ9ULV0 1848 aa12.01□□□□□ -0.49
STRADB-205ENST00000458269 NUP155O75694 1391 aa12.01□□□□□ -0.49
STRADB-205ENST00000458269 TRPM2O94759 1503 aa12.01□□□□□ -0.49
STRADB-205ENST00000458269 ARHGAP23Q9P227 1491 aa11.99□□□□□ -0.49
STRADB-205ENST00000458269 SLIT1O75093 1534 aa11.99□□□□□ -0.49
STRADB-205ENST00000458269 IQGAP1P46940 1657 aa11.98□□□□□ -0.49
STRADB-205ENST00000458269 TMEM131LA2VDJ0 1609 aa11.98□□□□□ -0.49
STRADB-205ENST00000458269 CLTCL1P53675 1640 aa11.98□□□□□ -0.49
STRADB-205ENST00000458269 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
STRADB-205ENST00000458269 PTPRTO14522 1441 aa11.96□□□□□ -0.49
STRADB-205ENST00000458269 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.49
STRADB-205ENST00000458269 MED14O60244 1454 aa11.95□□□□□ -0.5
STRADB-205ENST00000458269 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
STRADB-205ENST00000458269 SCAF11Q99590 1463 aaKnown RBP11.94□□□□□ -0.5
STRADB-205ENST00000458269 KIF1BO60333 1816 aa11.91□□□□□ -0.5
STRADB-205ENST00000458269 LTBP4Q8N2S1 1624 aa11.91□□□□□ -0.5
STRADB-205ENST00000458269 NPHP4O75161 1426 aaPredicted RBP11.91□□□□□ -0.5
STRADB-205ENST00000458269 ZFYVE9O95405 1425 aa11.91□□□□□ -0.5
STRADB-205ENST00000458269 TMEM2Q9UHN6 1383 aa11.91□□□□□ -0.5
STRADB-205ENST00000458269 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
STRADB-205ENST00000458269 PKD2Q13563 968 aa11.9□□□□□ -0.5
STRADB-205ENST00000458269 SLC52A1Q9NWF4 448 aa11.9□□□□□ -0.5
STRADB-205ENST00000458269 IDI1Q13907 227 aa11.89□□□□□ -0.51
STRADB-205ENST00000458269 NEXMIFQ5QGS0 1516 aa11.88□□□□□ -0.51
STRADB-205ENST00000458269 THEMISQ8N1K5 641 aaPredicted RBP11.88□□□□□ -0.51
STRADB-205ENST00000458269 TRIM52Q96A61 297 aa11.88□□□□□ -0.51
STRADB-205ENST00000458269 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
STRADB-205ENST00000458269 IFT172Q9UG01 1749 aa11.87□□□□□ -0.51
STRADB-205ENST00000458269 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
STRADB-205ENST00000458269 RIMS2Q9UQ26 1411 aa11.86□□□□□ -0.51
STRADB-205ENST00000458269 NRXN3Q9Y4C0 1643 aa11.86□□□□□ -0.51
STRADB-205ENST00000458269 NWD1Q149M9 1564 aa11.86□□□□□ -0.51
STRADB-205ENST00000458269 PPLO60437 1756 aa11.86□□□□□ -0.51
STRADB-205ENST00000458269 DIP2AQ14689 1571 aa11.85□□□□□ -0.51
STRADB-205ENST00000458269 EVX2Q03828 476 aa11.84□□□□□ -0.51
STRADB-205ENST00000458269 ANKLE2Q86XL3 938 aa11.84□□□□□ -0.51
STRADB-205ENST00000458269 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
STRADB-205ENST00000458269 ACIN1Q9UKV3 1341 aaKnown RBP11.84□□□□□ -0.51
STRADB-205ENST00000458269 SETBP1Q9Y6X0 1596 aa11.84□□□□□ -0.51
STRADB-205ENST00000458269 CPS1P31327 1500 aa11.83□□□□□ -0.52
STRADB-205ENST00000458269 LTKP29376 864 aa11.83□□□□□ -0.52
STRADB-205ENST00000458269 CCDC144AA2RUR9 1427 aa11.83□□□□□ -0.52
STRADB-205ENST00000458269 SETD1AO15047 1707 aaKnown RBP11.83□□□□□ -0.52
STRADB-205ENST00000458269 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
STRADB-205ENST00000458269 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
STRADB-205ENST00000458269 ZNF335Q9H4Z2 1342 aaPredicted RBP11.82□□□□□ -0.52
STRADB-205ENST00000458269 IQSEC2Q5JU85 1478 aa11.82□□□□□ -0.52
STRADB-205ENST00000458269 SPATA31E1Q6ZUB1 1445 aa11.81□□□□□ -0.52
STRADB-205ENST00000458269 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
STRADB-205ENST00000458269 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
STRADB-205ENST00000458269 ADAMTS13Q76LX8 1427 aa11.79□□□□□ -0.52
STRADB-205ENST00000458269 CHGAP10645 457 aaKnown RBP11.79□□□□□ -0.52
STRADB-205ENST00000458269 TXNDC2Q86VQ3 553 aa11.79□□□□□ -0.52
STRADB-205ENST00000458269 EID1Q9Y6B2 187 aa11.79□□□□□ -0.52
STRADB-205ENST00000458269 XRN1Q8IZH2 1706 aaKnown RBP11.79□□□□□ -0.52
STRADB-205ENST00000458269 NKTRP30414 1462 aaKnown RBP11.78□□□□□ -0.52
STRADB-205ENST00000458269 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
STRADB-205ENST00000458269 HRCP23327 699 aa11.78□□□□□ -0.52
STRADB-205ENST00000458269 CHD2O14647 1828 aaKnown RBP11.78□□□□□ -0.52
STRADB-205ENST00000458269 ANKRD30BQ9BXX2 1392 aa11.77□□□□□ -0.53
STRADB-205ENST00000458269 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
STRADB-205ENST00000458269 PPP1R15AO75807 674 aaPredicted RBP11.76□□□□□ -0.53
STRADB-205ENST00000458269 MYOM2P54296 1465 aa11.76□□□□□ -0.53
STRADB-205ENST00000458269 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.75□□□□□ -0.53
STRADB-205ENST00000458269 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
STRADB-205ENST00000458269 LAMC1P11047 1609 aa11.75□□□□□ -0.53
STRADB-205ENST00000458269 ASXL1Q8IXJ9 1541 aa11.74□□□□□ -0.53
STRADB-205ENST00000458269 ALKQ9UM73 1620 aa11.74□□□□□ -0.53
STRADB-205ENST00000458269 TRIM26Q12899 539 aaPredicted RBP11.73□□□□□ -0.53
STRADB-205ENST00000458269 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
STRADB-205ENST00000458269 NUTM2DQ5VT03 806 aaPredicted RBP11.73□□□□□ -0.53
STRADB-205ENST00000458269 NRXN1Q9ULB1 1477 aa11.72□□□□□ -0.53
STRADB-205ENST00000458269 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
STRADB-205ENST00000458269 SLC26A8Q96RN1 970 aa11.72□□□□□ -0.53
STRADB-205ENST00000458269 KNDC1Q76NI1 1749 aa11.72□□□□□ -0.53
STRADB-205ENST00000458269 PIK3C2GO75747 1445 aa11.71□□□□□ -0.53
STRADB-205ENST00000458269 PIK3R4Q99570 1358 aa11.71□□□□□ -0.53
STRADB-205ENST00000458269 PRAG1Q86YV5 1406 aa11.7□□□□□ -0.54
STRADB-205ENST00000458269 PTPRUQ92729 1446 aa11.7□□□□□ -0.54
STRADB-205ENST00000458269 DHX57Q6P158 1386 aaKnown RBP11.7□□□□□ -0.54
STRADB-205ENST00000458269 RPGRIP1LQ68CZ1 1315 aa11.7□□□□□ -0.54
STRADB-205ENST00000458269 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms