RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SYNE3Q6ZMZ3 975 aa24.08■■□□□ 1.44
SNX27-204ENST00000458013 TRIM34Q9BYJ4 488 aa24.07■■□□□ 1.44
SNX27-204ENST00000458013 BICD2Q8TD16 824 aa24.07■■□□□ 1.44
SNX27-204ENST00000458013 NFXL1Q6ZNB6 911 aa24.06■■□□□ 1.44
SNX27-204ENST00000458013 VPS37CA5D8V6 355 aaPredicted RBP24.06■■□□□ 1.44
SNX27-204ENST00000458013 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
SNX27-204ENST00000458013 KLHL34Q8N239 644 aa24.05■■□□□ 1.44
SNX27-204ENST00000458013 KIF3AQ9Y496 699 aa24.05■■□□□ 1.44
SNX27-204ENST00000458013 IFIT2P09913 472 aaKnown RBP24.05■■□□□ 1.44
SNX27-204ENST00000458013 TRIM29Q14134 588 aa24.05■■□□□ 1.44
SNX27-204ENST00000458013 NUTM2GQ5VZR2 741 aa24.04■■□□□ 1.44
SNX27-204ENST00000458013 HMOX1P09601 288 aa24.04■■□□□ 1.44
SNX27-204ENST00000458013 HOMER1Q86YM7 354 aa24.04■■□□□ 1.44
SNX27-204ENST00000458013 TTC5Q8N0Z6 440 aa24.04■■□□□ 1.44
SNX27-204ENST00000458013 HDAC5Q9UQL6 1122 aa24.04■■□□□ 1.44
SNX27-204ENST00000458013 TEFQ10587 303 aa24.02■■□□□ 1.44
SNX27-204ENST00000458013 PDE3BQ13370 1112 aa24.02■■□□□ 1.44
SNX27-204ENST00000458013 CTDP1Q9Y5B0 961 aaPredicted RBP24.02■■□□□ 1.44
SNX27-204ENST00000458013 RIPK4P57078 832 aa24.02■■□□□ 1.44
SNX27-204ENST00000458013 TPM1P09493 284 aa24.02■■□□□ 1.44
SNX27-204ENST00000458013 AIMP1Q12904 312 aaKnown RBP24.01■■□□□ 1.43
SNX27-204ENST00000458013 VPS37DQ86XT2 251 aa24.01■■□□□ 1.43
SNX27-204ENST00000458013 E9PSI1 815 aa24.01■■□□□ 1.43
SNX27-204ENST00000458013 NAP1L1P55209 391 aaKnown RBP24■■□□□ 1.43
SNX27-204ENST00000458013 SKIDA1Q1XH10 827 aa23.99■■□□□ 1.43
SNX27-204ENST00000458013 TTLL5Q6EMB2 1281 aa23.99■■□□□ 1.43
SNX27-204ENST00000458013 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
SNX27-204ENST00000458013 CPLX1O14810 134 aa23.98■■□□□ 1.43
SNX27-204ENST00000458013 NOL10Q9BSC4 688 aaKnown RBP23.98■■□□□ 1.43
SNX27-204ENST00000458013 LNPKQ9C0E8 428 aa23.98■■□□□ 1.43
SNX27-204ENST00000458013 NACADO15069 1562 aa23.98■■□□□ 1.43
SNX27-204ENST00000458013 CGNL1Q0VF96 1302 aa23.98■■□□□ 1.43
SNX27-204ENST00000458013 CCDC144AA2RUR9 1427 aa23.97■■□□□ 1.43
SNX27-204ENST00000458013 CCDC27Q2M243 656 aa23.97■■□□□ 1.43
SNX27-204ENST00000458013 FKBP5Q13451 457 aaPredicted RBP23.96■■□□□ 1.43
SNX27-204ENST00000458013 PANK1Q8TE04 598 aa23.96■■□□□ 1.43
SNX27-204ENST00000458013 CHMP4AQ9BY43 222 aa23.96■■□□□ 1.43
SNX27-204ENST00000458013 SKOR2Q2VWA4 1001 aaPredicted RBP23.96■■□□□ 1.43
SNX27-204ENST00000458013 NEXNQ0ZGT2 675 aa23.95■■□□□ 1.42
SNX27-204ENST00000458013 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.95■■□□□ 1.42
SNX27-204ENST00000458013 ATP6V1DQ9Y5K8 247 aa23.94■■□□□ 1.42
SNX27-204ENST00000458013 CCDC70Q6NSX1 233 aa23.94■■□□□ 1.42
SNX27-204ENST00000458013 PHLDB1Q86UU1 1377 aa23.94■■□□□ 1.42
SNX27-204ENST00000458013 AMOTL1Q8IY63 956 aa23.94■■□□□ 1.42
SNX27-204ENST00000458013 USP47Q96K76 1375 aa23.94■■□□□ 1.42
SNX27-204ENST00000458013 PRKRIP1Q9H875 184 aaPredicted RBP23.93■■□□□ 1.42
SNX27-204ENST00000458013 NEUROD6Q96NK8 337 aa23.93■■□□□ 1.42
SNX27-204ENST00000458013 FAM177BA6PVY3 158 aa23.93■■□□□ 1.42
SNX27-204ENST00000458013 IFT57Q9NWB7 429 aa23.93■■□□□ 1.42
SNX27-204ENST00000458013 DZIP1LQ8IYY4 767 aaKnown RBP23.92■■□□□ 1.42
SNX27-204ENST00000458013 ZKSCAN1P17029 563 aaPredicted RBP23.92■■□□□ 1.42
SNX27-204ENST00000458013 EVC2Q86UK5 1308 aa23.92■■□□□ 1.42
SNX27-204ENST00000458013 DIAPH1O60610 1272 aaKnown RBP23.92■■□□□ 1.42
SNX27-204ENST00000458013 PDILTQ8N807 584 aa23.92■■□□□ 1.42
SNX27-204ENST00000458013 MEX3CQ5U5Q3 659 aaKnown RBP23.91■■□□□ 1.42
SNX27-204ENST00000458013 CNKSR2Q8WXI2 1034 aa23.91■■□□□ 1.42
SNX27-204ENST00000458013 SMC3Q9UQE7 1217 aa23.91■■□□□ 1.42
SNX27-204ENST00000458013 STK11IPQ8N1F8 1099 aa23.91■■□□□ 1.42
SNX27-204ENST00000458013 SASS6Q6UVJ0 657 aa23.9■■□□□ 1.42
SNX27-204ENST00000458013 RUFY2Q8WXA3 655 aa23.9■■□□□ 1.42
SNX27-204ENST00000458013 G3BP1Q13283 466 aaKnown RBP eCLIP23.9■■□□□ 1.42
SNX27-204ENST00000458013 RNF214Q8ND24 703 aa23.9■■□□□ 1.42
SNX27-204ENST00000458013 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.42
SNX27-204ENST00000458013 TSPYL4Q9UJ04 414 aa23.89■■□□□ 1.42
SNX27-204ENST00000458013 GPS2Q13227 327 aa23.88■■□□□ 1.41
SNX27-204ENST00000458013 PSME1Q06323 249 aa23.88■■□□□ 1.41
SNX27-204ENST00000458013 WASHC4Q2M389 1173 aa23.88■■□□□ 1.41
SNX27-204ENST00000458013 DDX19BQ9UMR2 479 aa23.87■■□□□ 1.41
SNX27-204ENST00000458013 USP35Q9P2H5 1018 aa23.87■■□□□ 1.41
SNX27-204ENST00000458013 REC8O95072 547 aa23.87■■□□□ 1.41
SNX27-204ENST00000458013 DHX57Q6P158 1386 aaKnown RBP23.87■■□□□ 1.41
SNX27-204ENST00000458013 ERICH2A1L162 156 aa23.86■■□□□ 1.41
SNX27-204ENST00000458013 R3HCC1Q9Y3T6 440 aaKnown RBP23.86■■□□□ 1.41
SNX27-204ENST00000458013 WIZO95785 1651 aa23.86■■□□□ 1.41
SNX27-204ENST00000458013 C1orf115Q9H7X2 142 aa23.86■■□□□ 1.41
SNX27-204ENST00000458013 CCDC18Q5T9S5 1454 aa23.86■■□□□ 1.41
SNX27-204ENST00000458013 TRDNQ13061 729 aa23.86■■□□□ 1.41
SNX27-204ENST00000458013 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
SNX27-204ENST00000458013 RAPGEF2Q9Y4G8 1499 aa23.85■■□□□ 1.41
SNX27-204ENST00000458013 IPO7O95373 1038 aaKnown RBP23.83■■□□□ 1.41
SNX27-204ENST00000458013 CWC22Q9HCG8 908 aaKnown RBP23.83■■□□□ 1.41
SNX27-204ENST00000458013 RIC3Q7Z5B4 369 aa23.83■■□□□ 1.41
SNX27-204ENST00000458013 DHX37Q8IY37 1157 aaKnown RBP23.83■■□□□ 1.41
SNX27-204ENST00000458013 CABP2Q9NPB3 220 aa23.83■■□□□ 1.4
SNX27-204ENST00000458013 CPLX2Q6PUV4 134 aaKnown RBP23.82■■□□□ 1.4
SNX27-204ENST00000458013 CCDC43Q96MW1 224 aaKnown RBP23.82■■□□□ 1.4
SNX27-204ENST00000458013 C22orf23Q9BZE7 217 aa23.82■■□□□ 1.4
SNX27-204ENST00000458013 CEBPZQ03701 1054 aaKnown RBP23.82■■□□□ 1.4
SNX27-204ENST00000458013 INTS3Q68E01 1043 aaKnown RBP23.82■■□□□ 1.4
SNX27-204ENST00000458013 ANKRD20A12PQ8NF67 263 aa23.82■■□□□ 1.4
SNX27-204ENST00000458013 CCDC47Q96A33 483 aaKnown RBP23.82■■□□□ 1.4
SNX27-204ENST00000458013 CHMP5Q9NZZ3 219 aa23.82■■□□□ 1.4
SNX27-204ENST00000458013 GGNBP2Q9H3C7 697 aa23.81■■□□□ 1.4
SNX27-204ENST00000458013 MPNDQ8N594 471 aa23.81■■□□□ 1.4
SNX27-204ENST00000458013 MAP4K4O95819 1239 aaPredicted RBP23.81■■□□□ 1.4
SNX27-204ENST00000458013 DNAJC2Q99543 621 aaKnown RBP23.8■■□□□ 1.4
SNX27-204ENST00000458013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.8■■□□□ 1.46e-14■■■■■ 335.4
SNX27-204ENST00000458013 ATP2B1P20020 1258 aa23.8■■□□□ 1.4
SNX27-204ENST00000458013 ZFYVE27Q5T4F4 411 aa23.8■■□□□ 1.4
SNX27-204ENST00000458013 RUFY1Q96T51 708 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms