RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
UPF3AP2-201ENST00000457924 DAPK1P53355 1430 aa22.5■■□□□ 1.19
UPF3AP2-201ENST00000457924 EFCAB6Q5THR3 1501 aa22.49■■□□□ 1.19
UPF3AP2-201ENST00000457924 IDI1Q13907 227 aa22.47■■□□□ 1.19
UPF3AP2-201ENST00000457924 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
UPF3AP2-201ENST00000457924 FAM135BQ49AJ0 1406 aa22.47■■□□□ 1.19
UPF3AP2-201ENST00000457924 LMTK2Q8IWU2 1503 aa22.47■■□□□ 1.19
UPF3AP2-201ENST00000457924 TMEM94Q12767 1356 aa22.46■■□□□ 1.19
UPF3AP2-201ENST00000457924 KCNA6P17658 529 aa22.45■■□□□ 1.18
UPF3AP2-201ENST00000457924 FGD6Q6ZV73 1430 aa22.44■■□□□ 1.18
UPF3AP2-201ENST00000457924 RGS17Q9UGC6 210 aaPredicted RBP22.44■■□□□ 1.18
UPF3AP2-201ENST00000457924 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
UPF3AP2-201ENST00000457924 PROSER2Q86WR7 435 aaPredicted RBP22.42■■□□□ 1.18
UPF3AP2-201ENST00000457924 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
UPF3AP2-201ENST00000457924 TET3O43151 1660 aa22.42■■□□□ 1.18
UPF3AP2-201ENST00000457924 ROBO1Q9Y6N7 1651 aa22.39■■□□□ 1.18
UPF3AP2-201ENST00000457924 ADGRB3O60242 1522 aa22.39■■□□□ 1.17
UPF3AP2-201ENST00000457924 NOS1P29475 1434 aa22.39■■□□□ 1.17
UPF3AP2-201ENST00000457924 CACNB1Q02641 598 aaPredicted RBP22.38■■□□□ 1.17
UPF3AP2-201ENST00000457924 BCANQ96GW7 911 aa22.38■■□□□ 1.17
UPF3AP2-201ENST00000457924 SLC52A1Q9NWF4 448 aa22.38■■□□□ 1.17
UPF3AP2-201ENST00000457924 ATXN8OSP0DMR3 200 aa22.37■■□□□ 1.17
UPF3AP2-201ENST00000457924 RBM33Q96EV2 1170 aaKnown RBP22.37■■□□□ 1.17
UPF3AP2-201ENST00000457924 NKTRP30414 1462 aaKnown RBP22.36■■□□□ 1.17
UPF3AP2-201ENST00000457924 NWD1Q149M9 1564 aa22.35■■□□□ 1.17
UPF3AP2-201ENST00000457924 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
UPF3AP2-201ENST00000457924 MSH6P52701 1360 aa22.34■■□□□ 1.17
UPF3AP2-201ENST00000457924 ADGRL2O95490 1459 aa22.32■■□□□ 1.16
UPF3AP2-201ENST00000457924 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
UPF3AP2-201ENST00000457924 HDGFP51858 240 aaKnown RBP22.3■■□□□ 1.16
UPF3AP2-201ENST00000457924 POTEAQ6S8J7 498 aa22.3■■□□□ 1.16
UPF3AP2-201ENST00000457924 ATF5Q9Y2D1 282 aaPredicted RBP22.3■■□□□ 1.16
UPF3AP2-201ENST00000457924 PPP1R15AO75807 674 aaPredicted RBP22.29■■□□□ 1.16
UPF3AP2-201ENST00000457924 SLAIN2Q9P270 581 aa22.29■■□□□ 1.16
UPF3AP2-201ENST00000457924 MYO5BQ9ULV0 1848 aa22.29■■□□□ 1.16
UPF3AP2-201ENST00000457924 CHD2O14647 1828 aaKnown RBP22.28■■□□□ 1.16
UPF3AP2-201ENST00000457924 ANKRD50Q9ULJ7 1429 aa22.28■■□□□ 1.16
UPF3AP2-201ENST00000457924 PHLPP1O60346 1717 aa22.28■■□□□ 1.16
UPF3AP2-201ENST00000457924 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.16
UPF3AP2-201ENST00000457924 FAM50AQ14320 339 aaKnown RBP22.27■■□□□ 1.16
UPF3AP2-201ENST00000457924 GCC2Q8IWJ2 1684 aa22.26■■□□□ 1.15
UPF3AP2-201ENST00000457924 ZFYVE9O95405 1425 aa22.26■■□□□ 1.15
UPF3AP2-201ENST00000457924 RIMS2Q9UQ26 1411 aa22.25■■□□□ 1.15
UPF3AP2-201ENST00000457924 TMEM131LA2VDJ0 1609 aa22.24■■□□□ 1.15
UPF3AP2-201ENST00000457924 JCADQ9P266 1359 aa22.24■■□□□ 1.15
UPF3AP2-201ENST00000457924 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
UPF3AP2-201ENST00000457924 TBX22Q9Y458 520 aa22.21■■□□□ 1.15
UPF3AP2-201ENST00000457924 CAPN15O75808 1086 aa22.2■■□□□ 1.14
UPF3AP2-201ENST00000457924 CHGAP10645 457 aaKnown RBP22.2■■□□□ 1.14
UPF3AP2-201ENST00000457924 NCOA3Q9Y6Q9 1424 aa22.2■■□□□ 1.14
UPF3AP2-201ENST00000457924 C14orf37Q86TY3 774 aa22.19■■□□□ 1.14
UPF3AP2-201ENST00000457924 COL16A1Q07092 1604 aaPredicted RBP22.17■■□□□ 1.14
UPF3AP2-201ENST00000457924 UNC13BO14795 1591 aa22.17■■□□□ 1.14
UPF3AP2-201ENST00000457924 E9PCH4 1651 aa22.15■■□□□ 1.14
UPF3AP2-201ENST00000457924 DIP2AQ14689 1571 aa22.15■■□□□ 1.14
UPF3AP2-201ENST00000457924 SETD1AO15047 1707 aaKnown RBP22.14■■□□□ 1.14
UPF3AP2-201ENST00000457924 NUTM2DQ5VT03 806 aaPredicted RBP22.14■■□□□ 1.13
UPF3AP2-201ENST00000457924 CADPS2Q86UW7 1296 aa22.14■■□□□ 1.13
UPF3AP2-201ENST00000457924 SPATA31A6Q5VVP1 1343 aa22.13■■□□□ 1.13
UPF3AP2-201ENST00000457924 ATF3P18847 181 aa22.13■■□□□ 1.13
UPF3AP2-201ENST00000457924 C19orf44Q9H6X5 657 aa22.13■■□□□ 1.13
UPF3AP2-201ENST00000457924 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.13■■□□□ 1.13
UPF3AP2-201ENST00000457924 ADAMTS13Q76LX8 1427 aa22.13■■□□□ 1.13
UPF3AP2-201ENST00000457924 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
UPF3AP2-201ENST00000457924 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
UPF3AP2-201ENST00000457924 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
UPF3AP2-201ENST00000457924 ZNF772Q68DY9 489 aaPredicted RBP22.09■■□□□ 1.13
UPF3AP2-201ENST00000457924 TRPM2O94759 1503 aa22.09■■□□□ 1.13
UPF3AP2-201ENST00000457924 LRP6O75581 1613 aa22.09■■□□□ 1.13
UPF3AP2-201ENST00000457924 AHDC1Q5TGY3 1603 aaPredicted RBP22.09■■□□□ 1.13
UPF3AP2-201ENST00000457924 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
UPF3AP2-201ENST00000457924 SHPRHQ149N8 1683 aa22.07■■□□□ 1.12
UPF3AP2-201ENST00000457924 ROCK1Q13464 1354 aa22.07■■□□□ 1.12
UPF3AP2-201ENST00000457924 AMOTL2Q9Y2J4 779 aa22.06■■□□□ 1.12
UPF3AP2-201ENST00000457924 NUP155O75694 1391 aa22.04■■□□□ 1.12
UPF3AP2-201ENST00000457924 PTPRUQ92729 1446 aa22.02■■□□□ 1.12
UPF3AP2-201ENST00000457924 BRINP3Q76B58 766 aa22.01■■□□□ 1.11
UPF3AP2-201ENST00000457924 TRIM52Q96A61 297 aa22.01■■□□□ 1.11
UPF3AP2-201ENST00000457924 DCCP43146 1447 aa22■■□□□ 1.11
UPF3AP2-201ENST00000457924 NUTM2BA6NNL0 878 aaPredicted RBP21.98■■□□□ 1.11
UPF3AP2-201ENST00000457924 NUTM2EB1AL46 878 aaPredicted RBP21.98■■□□□ 1.11
UPF3AP2-201ENST00000457924 NUTM2AQ8IVF1 878 aaPredicted RBP21.98■■□□□ 1.11
UPF3AP2-201ENST00000457924 RXRBP28702 533 aa21.97■■□□□ 1.11
UPF3AP2-201ENST00000457924 UPF1Q92900 1129 aaKnown RBP eCLIP21.97■■□□□ 1.11
UPF3AP2-201ENST00000457924 NRXN3Q9Y4C0 1643 aa21.97■■□□□ 1.11
UPF3AP2-201ENST00000457924 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
UPF3AP2-201ENST00000457924 ASXL1Q8IXJ9 1541 aa21.96■■□□□ 1.11
UPF3AP2-201ENST00000457924 SETBP1Q9Y6X0 1596 aa21.96■■□□□ 1.11
UPF3AP2-201ENST00000457924 ITGAEP38570 1179 aa21.96■■□□□ 1.11
UPF3AP2-201ENST00000457924 ZNF326Q5BKZ1 582 aaKnown RBP21.96■■□□□ 1.11
UPF3AP2-201ENST00000457924 SPHKAPQ2M3C7 1700 aa21.96■■□□□ 1.11
UPF3AP2-201ENST00000457924 MST1RQ04912 1400 aa21.93■■□□□ 1.1
UPF3AP2-201ENST00000457924 SETD5Q9C0A6 1442 aa21.93■■□□□ 1.1
UPF3AP2-201ENST00000457924 NHSL1Q5SYE7 1610 aa21.92■■□□□ 1.1
UPF3AP2-201ENST00000457924 LRRC59Q96AG4 307 aaKnown RBP21.91■■□□□ 1.1
UPF3AP2-201ENST00000457924 CDK12Q9NYV4 1490 aaPredicted RBP21.9■■□□□ 1.1
UPF3AP2-201ENST00000457924 METP08581 1390 aa21.9■■□□□ 1.1
UPF3AP2-201ENST00000457924 AFF2P51816 1311 aa21.9■■□□□ 1.1
UPF3AP2-201ENST00000457924 DSG3P32926 999 aa21.9■■□□□ 1.1
UPF3AP2-201ENST00000457924 ADGRL3Q9HAR2 1447 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms