RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 SYNMO15061 1565 aa22.54■■□□□ 1.2
MBD1-210ENST00000457839 LAMC1P11047 1609 aa22.53■■□□□ 1.2
MBD1-210ENST00000457839 NEURL4Q96JN8 1562 aa22.52■■□□□ 1.2
MBD1-210ENST00000457839 ARHGAP31Q2M1Z3 1444 aa22.52■■□□□ 1.2
MBD1-210ENST00000457839 MYOM2P54296 1465 aa22.5■■□□□ 1.19
MBD1-210ENST00000457839 ZC3H13Q5T200 1668 aaKnown RBP22.5■■□□□ 1.19
MBD1-210ENST00000457839 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
MBD1-210ENST00000457839 IFT172Q9UG01 1749 aa22.48■■□□□ 1.19
MBD1-210ENST00000457839 SCAF11Q99590 1463 aaKnown RBP22.47■■□□□ 1.19
MBD1-210ENST00000457839 TMF1P82094 1093 aa22.47■■□□□ 1.19
MBD1-210ENST00000457839 REREQ9P2R6 1566 aa22.45■■□□□ 1.18
MBD1-210ENST00000457839 AGLP35573 1532 aa22.45■■□□□ 1.18
MBD1-210ENST00000457839 ARHGEF40Q8TER5 1519 aa22.45■■□□□ 1.18
MBD1-210ENST00000457839 IQGAP1P46940 1657 aa22.45■■□□□ 1.18
MBD1-210ENST00000457839 PIK3C2BO00750 1634 aa22.45■■□□□ 1.18
MBD1-210ENST00000457839 TMEM132EQ6IEE7 984 aa22.45■■□□□ 1.18
MBD1-210ENST00000457839 MRS2Q9HD23 443 aa22.44■■□□□ 1.18
MBD1-210ENST00000457839 SLC52A1Q9NWF4 448 aa22.44■■□□□ 1.18
MBD1-210ENST00000457839 NRXN1Q9ULB1 1477 aa22.43■■□□□ 1.18
MBD1-210ENST00000457839 PREX1Q8TCU6 1659 aa22.43■■□□□ 1.18
MBD1-210ENST00000457839 PPLO60437 1756 aa22.42■■□□□ 1.18
MBD1-210ENST00000457839 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
MBD1-210ENST00000457839 RPGRIP1LQ68CZ1 1315 aa22.41■■□□□ 1.18
MBD1-210ENST00000457839 PIK3C2GO75747 1445 aa22.41■■□□□ 1.18
MBD1-210ENST00000457839 FAM9BQ8IZU0 186 aa22.4■■□□□ 1.18
MBD1-210ENST00000457839 TRAK1Q9UPV9 953 aa22.4■■□□□ 1.18
MBD1-210ENST00000457839 KIAA1210Q9ULL0 1709 aa22.4■■□□□ 1.18
MBD1-210ENST00000457839 C14orf93Q9H972 538 aaKnown RBP22.39■■□□□ 1.18
MBD1-210ENST00000457839 ERVK-7P63135 1459 aa22.39■■□□□ 1.17
MBD1-210ENST00000457839 PANK3Q9H999 370 aa22.38■■□□□ 1.17
MBD1-210ENST00000457839 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
MBD1-210ENST00000457839 VGFO15240 615 aaPredicted RBP22.38■■□□□ 1.17
MBD1-210ENST00000457839 ESF1Q9H501 851 aaKnown RBP22.37■■□□□ 1.17
MBD1-210ENST00000457839 STAG3Q9UJ98 1225 aa22.37■■□□□ 1.17
MBD1-210ENST00000457839 MYO5BQ9ULV0 1848 aa22.37■■□□□ 1.17
MBD1-210ENST00000457839 NEXMIFQ5QGS0 1516 aa22.37■■□□□ 1.17
MBD1-210ENST00000457839 EIF3AQ14152 1382 aaKnown RBP22.37■■□□□ 1.17
MBD1-210ENST00000457839 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
MBD1-210ENST00000457839 PER1O15534 1290 aaPredicted RBP22.35■■□□□ 1.17
MBD1-210ENST00000457839 TMEM131LA2VDJ0 1609 aa22.33■■□□□ 1.17
MBD1-210ENST00000457839 ZMYM3Q14202 1370 aa22.32■■□□□ 1.16
MBD1-210ENST00000457839 CC2D1BQ5T0F9 858 aaKnown RBP22.32■■□□□ 1.16
MBD1-210ENST00000457839 ADGRB1O14514 1584 aa22.3■■□□□ 1.16
MBD1-210ENST00000457839 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
MBD1-210ENST00000457839 STK26Q9P289 416 aa22.28■■□□□ 1.16
MBD1-210ENST00000457839 SETBP1Q9Y6X0 1596 aa22.27■■□□□ 1.16
MBD1-210ENST00000457839 CDCA8Q53HL2 280 aa22.26■■□□□ 1.15
MBD1-210ENST00000457839 PLPPR3Q6T4P5 718 aa22.26■■□□□ 1.15
MBD1-210ENST00000457839 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
MBD1-210ENST00000457839 SPATA31D1Q6ZQQ2 1576 aa22.26■■□□□ 1.15
MBD1-210ENST00000457839 SENP3-EIF4A1A0A087X0R7 540 aa22.25■■□□□ 1.15
MBD1-210ENST00000457839 TMC1Q8TDI8 760 aa22.25■■□□□ 1.15
MBD1-210ENST00000457839 KTN1Q86UP2 1357 aaKnown RBP22.25■■□□□ 1.15
MBD1-210ENST00000457839 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
MBD1-210ENST00000457839 RALBP1Q15311 655 aa22.24■■□□□ 1.15
MBD1-210ENST00000457839 MYBBP1AQ9BQG0 1328 aaKnown RBP22.23■■□□□ 1.15
MBD1-210ENST00000457839 ZFYVE9O95405 1425 aa22.22■■□□□ 1.15
MBD1-210ENST00000457839 A2ML1A8K2U0 1454 aa22.22■■□□□ 1.15
MBD1-210ENST00000457839 PARD3Q8TEW0 1356 aa22.21■■□□□ 1.15
MBD1-210ENST00000457839 KNSTRNQ9Y448 316 aa22.2■■□□□ 1.14
MBD1-210ENST00000457839 MYO3AQ8NEV4 1616 aa22.18■■□□□ 1.14
MBD1-210ENST00000457839 PNISRQ8TF01 805 aaKnown RBP22.18■■□□□ 1.14
MBD1-210ENST00000457839 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
MBD1-210ENST00000457839 KDM5AP29375 1690 aaKnown RBP22.18■■□□□ 1.14
MBD1-210ENST00000457839 MYOM1P52179 1685 aa22.17■■□□□ 1.14
MBD1-210ENST00000457839 RIMS2Q9UQ26 1411 aa22.17■■□□□ 1.14
MBD1-210ENST00000457839 SBNO2Q9Y2G9 1366 aa22.16■■□□□ 1.14
MBD1-210ENST00000457839 TNRQ92752 1358 aa22.16■■□□□ 1.14
MBD1-210ENST00000457839 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
MBD1-210ENST00000457839 SLC24A1O60721 1099 aa22.15■■□□□ 1.14
MBD1-210ENST00000457839 AMER1Q5JTC6 1135 aaPredicted RBP22.15■■□□□ 1.14
MBD1-210ENST00000457839 NLRP13Q86W25 1043 aa22.14■■□□□ 1.13
MBD1-210ENST00000457839 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
MBD1-210ENST00000457839 SLC12A5Q9H2X9 1139 aa22.14■■□□□ 1.13
MBD1-210ENST00000457839 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
MBD1-210ENST00000457839 CARD14Q9BXL6 1004 aa22.13■■□□□ 1.13
MBD1-210ENST00000457839 ARHGEF28Q8N1W1 1705 aaKnown RBP22.12■■□□□ 1.13
MBD1-210ENST00000457839 PRAM1Q96QH2 718 aa22.12■■□□□ 1.13
MBD1-210ENST00000457839 ALKQ9UM73 1620 aa22.12■■□□□ 1.13
MBD1-210ENST00000457839 CABP2Q9NPB3 220 aa22.11■■□□□ 1.13
MBD1-210ENST00000457839 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
MBD1-210ENST00000457839 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
MBD1-210ENST00000457839 POGKQ9P215 609 aa22.09■■□□□ 1.13
MBD1-210ENST00000457839 BCANQ96GW7 911 aa22.07■■□□□ 1.12
MBD1-210ENST00000457839 PTPRMP28827 1452 aa22.07■■□□□ 1.12
MBD1-210ENST00000457839 EVC2Q86UK5 1308 aa22.07■■□□□ 1.12
MBD1-210ENST00000457839 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
MBD1-210ENST00000457839 ZBED9Q6R2W3 1325 aa22.05■■□□□ 1.12
MBD1-210ENST00000457839 WAPLQ7Z5K2 1190 aa22.05■■□□□ 1.12
MBD1-210ENST00000457839 PPP2R1AP30153 589 aa22.04■■□□□ 1.12
MBD1-210ENST00000457839 SRPK2P78362 688 aaKnown RBP22.04■■□□□ 1.12
MBD1-210ENST00000457839 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.03■■□□□ 1.12
MBD1-210ENST00000457839 LRPPRCP42704 1394 aaKnown RBP22.03■■□□□ 1.12
MBD1-210ENST00000457839 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
MBD1-210ENST00000457839 METP08581 1390 aa22.02■■□□□ 1.12
MBD1-210ENST00000457839 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
MBD1-210ENST00000457839 LTKP29376 864 aa22.01■■□□□ 1.11
MBD1-210ENST00000457839 PLEKHH1Q9ULM0 1364 aa22■■□□□ 1.11
MBD1-210ENST00000457839 SALL2Q9Y467 1007 aaPredicted RBP22■■□□□ 1.11
MBD1-210ENST00000457839 C3P01024 1663 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 259 ms