RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 KIF1BO60333 1816 aa12.59□□□□□ -0.39
RIF1-208ENST00000457745 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
RIF1-208ENST00000457745 MADDQ8WXG6 1647 aa12.59□□□□□ -0.39
RIF1-208ENST00000457745 SPATA31D1Q6ZQQ2 1576 aa12.58□□□□□ -0.4
RIF1-208ENST00000457745 CNTLNQ9NXG0 1405 aa12.58□□□□□ -0.4
RIF1-208ENST00000457745 ATF5Q9Y2D1 282 aaPredicted RBP12.58□□□□□ -0.4
RIF1-208ENST00000457745 FER1L4A9Z1Z3 1794 aa12.58□□□□□ -0.4
RIF1-208ENST00000457745 TRPM1Q7Z4N2 1603 aa12.58□□□□□ -0.4
RIF1-208ENST00000457745 ABCB7O75027 752 aa12.57□□□□□ -0.4
RIF1-208ENST00000457745 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
RIF1-208ENST00000457745 PRAG1Q86YV5 1406 aa12.56□□□□□ -0.4
RIF1-208ENST00000457745 C3P01024 1663 aa12.56□□□□□ -0.4
RIF1-208ENST00000457745 PPLO60437 1756 aa12.56□□□□□ -0.4
RIF1-208ENST00000457745 NEURL4Q96JN8 1562 aa12.56□□□□□ -0.4
RIF1-208ENST00000457745 TMEM131LA2VDJ0 1609 aa12.55□□□□□ -0.4
RIF1-208ENST00000457745 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
RIF1-208ENST00000457745 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
RIF1-208ENST00000457745 ZNF326Q5BKZ1 582 aaKnown RBP12.55□□□□□ -0.4
RIF1-208ENST00000457745 DCAF11Q8TEB1 546 aa12.55□□□□□ -0.4
RIF1-208ENST00000457745 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
RIF1-208ENST00000457745 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
RIF1-208ENST00000457745 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
RIF1-208ENST00000457745 NEXMIFQ5QGS0 1516 aa12.53□□□□□ -0.4
RIF1-208ENST00000457745 CEBPAP49715 358 aaPredicted RBP12.53□□□□□ -0.4
RIF1-208ENST00000457745 IDI1Q13907 227 aa12.53□□□□□ -0.4
RIF1-208ENST00000457745 ZMYM3Q14202 1370 aa12.53□□□□□ -0.4
RIF1-208ENST00000457745 NBPF1Q3BBV0 1214 aa12.51□□□□□ -0.41
RIF1-208ENST00000457745 ADGRF5Q8IZF2 1346 aa12.51□□□□□ -0.41
RIF1-208ENST00000457745 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
RIF1-208ENST00000457745 MYOM2P54296 1465 aa12.5□□□□□ -0.41
RIF1-208ENST00000457745 NRXN1Q9ULB1 1477 aa12.5□□□□□ -0.41
RIF1-208ENST00000457745 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
RIF1-208ENST00000457745 CHGAP10645 457 aaKnown RBP12.48□□□□□ -0.41
RIF1-208ENST00000457745 NUTM2DQ5VT03 806 aaPredicted RBP12.48□□□□□ -0.41
RIF1-208ENST00000457745 A2ML1A8K2U0 1454 aa12.47□□□□□ -0.41
RIF1-208ENST00000457745 IQGAP1P46940 1657 aa12.47□□□□□ -0.41
RIF1-208ENST00000457745 ASXL1Q8IXJ9 1541 aa12.47□□□□□ -0.41
RIF1-208ENST00000457745 UBR1Q8IWV7 1749 aa12.46□□□□□ -0.41
RIF1-208ENST00000457745 LAMC1P11047 1609 aa12.46□□□□□ -0.41
RIF1-208ENST00000457745 GPRASP1Q5JY77 1395 aa12.45□□□□□ -0.42
RIF1-208ENST00000457745 TNRQ92752 1358 aa12.45□□□□□ -0.42
RIF1-208ENST00000457745 MYO3AQ8NEV4 1616 aa12.44□□□□□ -0.42
RIF1-208ENST00000457745 USP47Q96K76 1375 aa12.44□□□□□ -0.42
RIF1-208ENST00000457745 POLA2Q14181 598 aa12.44□□□□□ -0.42
RIF1-208ENST00000457745 KIAA1210Q9ULL0 1709 aa12.44□□□□□ -0.42
RIF1-208ENST00000457745 PIK3C2GO75747 1445 aa12.44□□□□□ -0.42
RIF1-208ENST00000457745 NRXN3Q9Y4C0 1643 aa12.44□□□□□ -0.42
RIF1-208ENST00000457745 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
RIF1-208ENST00000457745 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
RIF1-208ENST00000457745 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
RIF1-208ENST00000457745 ZFYVE9O95405 1425 aa12.42□□□□□ -0.42
RIF1-208ENST00000457745 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
RIF1-208ENST00000457745 PTPRMP28827 1452 aa12.41□□□□□ -0.42
RIF1-208ENST00000457745 SLC52A1Q9NWF4 448 aa12.41□□□□□ -0.42
RIF1-208ENST00000457745 POLR1AO95602 1720 aaPredicted RBP12.4□□□□□ -0.43
RIF1-208ENST00000457745 WASHC2AQ641Q2 1341 aa12.39□□□□□ -0.43
RIF1-208ENST00000457745 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
RIF1-208ENST00000457745 EIF4G2P78344 907 aaKnown RBP eCLIP12.39□□□□□ -0.43
RIF1-208ENST00000457745 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
RIF1-208ENST00000457745 ESF1Q9H501 851 aaKnown RBP12.39□□□□□ -0.43
RIF1-208ENST00000457745 KDM5AP29375 1690 aaKnown RBP12.38□□□□□ -0.43
RIF1-208ENST00000457745 DIEXFQ68CQ4 756 aaKnown RBP12.37□□□□□ -0.43
RIF1-208ENST00000457745 RPGRIP1LQ68CZ1 1315 aa12.37□□□□□ -0.43
RIF1-208ENST00000457745 SETBP1Q9Y6X0 1596 aa12.36□□□□□ -0.43
RIF1-208ENST00000457745 NLRP1Q9C000 1473 aa12.36□□□□□ -0.43
RIF1-208ENST00000457745 CCDC7Q96M83 1385 aa12.36□□□□□ -0.43
RIF1-208ENST00000457745 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
RIF1-208ENST00000457745 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
RIF1-208ENST00000457745 ALKQ9UM73 1620 aa12.36□□□□□ -0.43
RIF1-208ENST00000457745 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
RIF1-208ENST00000457745 ZNF142P52746 1687 aaPredicted RBP12.35□□□□□ -0.43
RIF1-208ENST00000457745 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
RIF1-208ENST00000457745 ARHGAP23Q9P227 1491 aa12.35□□□□□ -0.43
RIF1-208ENST00000457745 ARHGEF28Q8N1W1 1705 aaKnown RBP12.35□□□□□ -0.43
RIF1-208ENST00000457745 TESK2Q96S53 571 aa12.35□□□□□ -0.43
RIF1-208ENST00000457745 C14orf93Q9H972 538 aaKnown RBP12.35□□□□□ -0.43
RIF1-208ENST00000457745 DISP3Q9P2K9 1392 aa12.34□□□□□ -0.43
RIF1-208ENST00000457745 LTKP29376 864 aa12.34□□□□□ -0.43
RIF1-208ENST00000457745 SCAF11Q99590 1463 aaKnown RBP12.34□□□□□ -0.43
RIF1-208ENST00000457745 TMEM2Q9UHN6 1383 aa12.33□□□□□ -0.44
RIF1-208ENST00000457745 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
RIF1-208ENST00000457745 SLIT1O75093 1534 aa12.32□□□□□ -0.44
RIF1-208ENST00000457745 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
RIF1-208ENST00000457745 KDM4FA0A1W2PPD8 638 aa12.31□□□□□ -0.44
RIF1-208ENST00000457745 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
RIF1-208ENST00000457745 QRICH2Q9H0J4 1663 aa12.31□□□□□ -0.44
RIF1-208ENST00000457745 MIER1Q8N108 512 aa12.3□□□□□ -0.44
RIF1-208ENST00000457745 METP08581 1390 aa12.3□□□□□ -0.44
RIF1-208ENST00000457745 MYOM1P52179 1685 aa12.29□□□□□ -0.44
RIF1-208ENST00000457745 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
RIF1-208ENST00000457745 MED14O60244 1454 aa12.28□□□□□ -0.44
RIF1-208ENST00000457745 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
RIF1-208ENST00000457745 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.44
RIF1-208ENST00000457745 TRAK1Q9UPV9 953 aa12.27□□□□□ -0.45
RIF1-208ENST00000457745 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.45
RIF1-208ENST00000457745 PTPRUQ92729 1446 aa12.27□□□□□ -0.45
RIF1-208ENST00000457745 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
RIF1-208ENST00000457745 YTHDC2Q9H6S0 1430 aaKnown RBP12.26□□□□□ -0.45
RIF1-208ENST00000457745 PLEKHG1Q9ULL1 1385 aa12.25□□□□□ -0.45
RIF1-208ENST00000457745 KNDC1Q76NI1 1749 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms