RNA–Protein interactions for RNA: ENST00000457458.6

CDK16-204, Transcript of cyclin dependent kinase 16, humanhuman

TSL 1 (best) BASIC

Gene CDK16, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-204ENST00000457458 DIP2BQ9P265 1576 aa17.18■□□□□ 0.34
CDK16-204ENST00000457458 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
CDK16-204ENST00000457458 MLECQ14165 292 aa17.17■□□□□ 0.34
CDK16-204ENST00000457458 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
CDK16-204ENST00000457458 COL17A1Q9UMD9 1497 aaPredicted RBP17.16■□□□□ 0.34
CDK16-204ENST00000457458 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
CDK16-204ENST00000457458 CLTCQ00610 1675 aaKnown RBP17.15■□□□□ 0.34
CDK16-204ENST00000457458 ANP32CO43423 234 aa17.14■□□□□ 0.33
CDK16-204ENST00000457458 SIGLEC1Q9BZZ2 1709 aa17.14■□□□□ 0.33
CDK16-204ENST00000457458 KIF13AQ9H1H9 1805 aa17.11■□□□□ 0.33
CDK16-204ENST00000457458 ABCC3O15438 1527 aa17.1■□□□□ 0.33
CDK16-204ENST00000457458 NPATQ14207 1427 aa17.09■□□□□ 0.33
CDK16-204ENST00000457458 ZFYVE9O95405 1425 aa17.08■□□□□ 0.33
CDK16-204ENST00000457458 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.33
CDK16-204ENST00000457458 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.33
CDK16-204ENST00000457458 PREX1Q8TCU6 1659 aa17.08■□□□□ 0.32
CDK16-204ENST00000457458 CCDC184Q52MB2 194 aa17.08■□□□□ 0.32
CDK16-204ENST00000457458 FBXO31Q5XUX0 539 aaPredicted RBP17.08■□□□□ 0.32
CDK16-204ENST00000457458 ADGRF5Q8IZF2 1346 aa17.06■□□□□ 0.32
CDK16-204ENST00000457458 KNDC1Q76NI1 1749 aa17.06■□□□□ 0.32
CDK16-204ENST00000457458 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
CDK16-204ENST00000457458 NOS1P29475 1434 aa17.05■□□□□ 0.32
CDK16-204ENST00000457458 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
CDK16-204ENST00000457458 ANKRD26Q9UPS8 1709 aa17.04■□□□□ 0.32
CDK16-204ENST00000457458 NPC1L1Q9UHC9 1359 aa17.03■□□□□ 0.32
CDK16-204ENST00000457458 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
CDK16-204ENST00000457458 ADGRB1O14514 1584 aa17.01■□□□□ 0.31
CDK16-204ENST00000457458 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
CDK16-204ENST00000457458 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
CDK16-204ENST00000457458 IDI1Q13907 227 aa17■□□□□ 0.31
CDK16-204ENST00000457458 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
CDK16-204ENST00000457458 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
CDK16-204ENST00000457458 TMEM131LA2VDJ0 1609 aa16.99■□□□□ 0.31
CDK16-204ENST00000457458 NEXMIFQ5QGS0 1516 aa16.98■□□□□ 0.31
CDK16-204ENST00000457458 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
CDK16-204ENST00000457458 SPATA31D1Q6ZQQ2 1576 aa16.98■□□□□ 0.31
CDK16-204ENST00000457458 TESK2Q96S53 571 aa16.97■□□□□ 0.31
CDK16-204ENST00000457458 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
CDK16-204ENST00000457458 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
CDK16-204ENST00000457458 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
CDK16-204ENST00000457458 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
CDK16-204ENST00000457458 RIMS1Q86UR5 1692 aaKnown RBP16.93■□□□□ 0.3
CDK16-204ENST00000457458 QRICH2Q9H0J4 1663 aa16.93■□□□□ 0.3
CDK16-204ENST00000457458 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
CDK16-204ENST00000457458 FAM9BQ8IZU0 186 aa16.91■□□□□ 0.3
CDK16-204ENST00000457458 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
CDK16-204ENST00000457458 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
CDK16-204ENST00000457458 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
CDK16-204ENST00000457458 PIK3C2GO75747 1445 aa16.91■□□□□ 0.3
CDK16-204ENST00000457458 PARD3Q8TEW0 1356 aa16.9■□□□□ 0.3
CDK16-204ENST00000457458 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.3
CDK16-204ENST00000457458 MRS2Q9HD23 443 aa16.89■□□□□ 0.29
CDK16-204ENST00000457458 SAFB2Q14151 953 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDK16-204ENST00000457458 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
CDK16-204ENST00000457458 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
CDK16-204ENST00000457458 CEBPAP49715 358 aaPredicted RBP16.87■□□□□ 0.29
CDK16-204ENST00000457458 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
CDK16-204ENST00000457458 PANK3Q9H999 370 aa16.86■□□□□ 0.29
CDK16-204ENST00000457458 STK26Q9P289 416 aa16.86■□□□□ 0.29
CDK16-204ENST00000457458 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
CDK16-204ENST00000457458 TMF1P82094 1093 aa16.85■□□□□ 0.29
CDK16-204ENST00000457458 BRD4O60885 1362 aaPredicted RBP16.85■□□□□ 0.29
CDK16-204ENST00000457458 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
CDK16-204ENST00000457458 RPGRIP1LQ68CZ1 1315 aa16.85■□□□□ 0.29
CDK16-204ENST00000457458 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
CDK16-204ENST00000457458 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
CDK16-204ENST00000457458 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDK16-204ENST00000457458 SLC52A1Q9NWF4 448 aa16.81■□□□□ 0.28
CDK16-204ENST00000457458 C14orf93Q9H972 538 aaKnown RBP16.81■□□□□ 0.28
CDK16-204ENST00000457458 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
CDK16-204ENST00000457458 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
CDK16-204ENST00000457458 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
CDK16-204ENST00000457458 MED14O60244 1454 aa16.79■□□□□ 0.28
CDK16-204ENST00000457458 ADGRB2O60241 1585 aa16.79■□□□□ 0.28
CDK16-204ENST00000457458 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
CDK16-204ENST00000457458 PER1O15534 1290 aaPredicted RBP16.79■□□□□ 0.28
CDK16-204ENST00000457458 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
CDK16-204ENST00000457458 VGFO15240 615 aaPredicted RBP16.78■□□□□ 0.28
CDK16-204ENST00000457458 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
CDK16-204ENST00000457458 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.28
CDK16-204ENST00000457458 ZBED9Q6R2W3 1325 aa16.76■□□□□ 0.27
CDK16-204ENST00000457458 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
CDK16-204ENST00000457458 EIF3AQ14152 1382 aaKnown RBP16.75■□□□□ 0.27
CDK16-204ENST00000457458 CDC42BPGQ6DT37 1551 aa16.75■□□□□ 0.27
CDK16-204ENST00000457458 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
CDK16-204ENST00000457458 RALBP1Q15311 655 aa16.73■□□□□ 0.27
CDK16-204ENST00000457458 LRRC7Q96NW7 1537 aa16.73■□□□□ 0.27
CDK16-204ENST00000457458 TOPAZ1Q8N9V7 1692 aa16.73■□□□□ 0.27
CDK16-204ENST00000457458 TMC1Q8TDI8 760 aa16.73■□□□□ 0.27
CDK16-204ENST00000457458 KIF20BQ96Q89 1820 aa16.73■□□□□ 0.27
CDK16-204ENST00000457458 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
CDK16-204ENST00000457458 AKAP12Q02952 1782 aa16.71■□□□□ 0.27
CDK16-204ENST00000457458 BCANQ96GW7 911 aa16.71■□□□□ 0.27
CDK16-204ENST00000457458 NINLQ9Y2I6 1382 aa16.71■□□□□ 0.27
CDK16-204ENST00000457458 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
CDK16-204ENST00000457458 CPS1P31327 1500 aa16.71■□□□□ 0.27
CDK16-204ENST00000457458 SLC12A5Q9H2X9 1139 aa16.71■□□□□ 0.26
CDK16-204ENST00000457458 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
CDK16-204ENST00000457458 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
CDK16-204ENST00000457458 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms