RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 LTV1Q96GA3 475 aaPredicted RBP12.3□□□□□ -0.44
MSC-AS1-201ENST00000457356 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
MSC-AS1-201ENST00000457356 WDR97A6NE52 1622 aa12.3□□□□□ -0.44
MSC-AS1-201ENST00000457356 RAPGEF6Q8TEU7 1601 aa12.3□□□□□ -0.44
MSC-AS1-201ENST00000457356 PPP6R1Q9UPN7 881 aa12.3□□□□□ -0.44
MSC-AS1-201ENST00000457356 CLUAP1Q96AJ1 413 aa12.3□□□□□ -0.44
MSC-AS1-201ENST00000457356 GBP4Q96PP9 640 aa12.3□□□□□ -0.44
MSC-AS1-201ENST00000457356 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
MSC-AS1-201ENST00000457356 TIAM1Q13009 1591 aa12.29□□□□□ -0.44
MSC-AS1-201ENST00000457356 DRC7Q8IY82 874 aa12.29□□□□□ -0.44
MSC-AS1-201ENST00000457356 ZMYND15Q9H091 742 aa12.29□□□□□ -0.44
MSC-AS1-201ENST00000457356 DHX57Q6P158 1386 aaKnown RBP12.29□□□□□ -0.44
MSC-AS1-201ENST00000457356 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
MSC-AS1-201ENST00000457356 PLIN1O60240 522 aa12.29□□□□□ -0.44
MSC-AS1-201ENST00000457356 ESCO1Q5FWF5 840 aa12.29□□□□□ -0.44
MSC-AS1-201ENST00000457356 AMPHP49418 695 aa12.28□□□□□ -0.44
MSC-AS1-201ENST00000457356 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
MSC-AS1-201ENST00000457356 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
MSC-AS1-201ENST00000457356 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
MSC-AS1-201ENST00000457356 KCNJ4P48050 445 aa12.28□□□□□ -0.44
MSC-AS1-201ENST00000457356 FGD1P98174 961 aa12.28□□□□□ -0.44
MSC-AS1-201ENST00000457356 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
MSC-AS1-201ENST00000457356 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.44
MSC-AS1-201ENST00000457356 DAPK1P53355 1430 aa12.27□□□□□ -0.45
MSC-AS1-201ENST00000457356 MS4A1P11836 297 aa12.27□□□□□ -0.45
MSC-AS1-201ENST00000457356 EXOC6Q8TAG9 804 aa12.27□□□□□ -0.45
MSC-AS1-201ENST00000457356 DISP1Q96F81 1524 aa12.27□□□□□ -0.45
MSC-AS1-201ENST00000457356 CFAP70Q5T0N1 1121 aa12.26□□□□□ -0.45
MSC-AS1-201ENST00000457356 EVC2Q86UK5 1308 aa12.26□□□□□ -0.45
MSC-AS1-201ENST00000457356 CHD1O14646 1710 aa12.26□□□□□ -0.45
MSC-AS1-201ENST00000457356 NAP1L2Q9ULW6 460 aaPredicted RBP12.26□□□□□ -0.45
MSC-AS1-201ENST00000457356 CAMSAP2Q08AD1 1489 aa12.26□□□□□ -0.45
MSC-AS1-201ENST00000457356 IDI1Q13907 227 aa12.25□□□□□ -0.45
MSC-AS1-201ENST00000457356 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
MSC-AS1-201ENST00000457356 DHX29Q7Z478 1369 aaKnown RBP12.24□□□□□ -0.45
MSC-AS1-201ENST00000457356 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
MSC-AS1-201ENST00000457356 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
MSC-AS1-201ENST00000457356 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
MSC-AS1-201ENST00000457356 ZNF518AQ6AHZ1 1483 aa12.24□□□□□ -0.45
MSC-AS1-201ENST00000457356 NRDCO43847 1150 aa12.23□□□□□ -0.45
MSC-AS1-201ENST00000457356 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
MSC-AS1-201ENST00000457356 GPATCH8Q9UKJ3 1502 aaKnown RBP12.23□□□□□ -0.45
MSC-AS1-201ENST00000457356 RWDD1Q9H446 243 aaPredicted RBP12.22□□□□□ -0.45
MSC-AS1-201ENST00000457356 NUTM2GQ5VZR2 741 aa12.22□□□□□ -0.45
MSC-AS1-201ENST00000457356 CENPJQ9HC77 1338 aaPredicted RBP12.21□□□□□ -0.45
MSC-AS1-201ENST00000457356 OS9Q13438 667 aaPredicted RBP12.21□□□□□ -0.45
MSC-AS1-201ENST00000457356 PMFBP1Q8TBY8 1022 aa12.21□□□□□ -0.45
MSC-AS1-201ENST00000457356 TNRQ92752 1358 aa12.21□□□□□ -0.45
MSC-AS1-201ENST00000457356 TULP1O00294 542 aaPredicted RBP12.21□□□□□ -0.45
MSC-AS1-201ENST00000457356 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.45
MSC-AS1-201ENST00000457356 CTTNBP2Q8WZ74 1663 aa12.21□□□□□ -0.46
MSC-AS1-201ENST00000457356 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
MSC-AS1-201ENST00000457356 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
MSC-AS1-201ENST00000457356 TNNT3P45378 269 aaPredicted RBP12.2□□□□□ -0.46
MSC-AS1-201ENST00000457356 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
MSC-AS1-201ENST00000457356 FOXD4L5Q5VV16 416 aaPredicted RBP12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 FOXD4L4Q8WXT5 416 aaPredicted RBP12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 COG3Q96JB2 828 aa12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 PRKRIP1Q9H875 184 aaPredicted RBP12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 GOLGA6L6A8MZA4 724 aa12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 A2MP01023 1474 aa12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 GPRASP1Q5JY77 1395 aa12.19□□□□□ -0.46
MSC-AS1-201ENST00000457356 ABCC5O15440 1437 aa12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 TOM1O60784 492 aa12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 ZNF330Q9Y3S2 320 aaPredicted RBP12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 ABCC10Q5T3U5 1492 aa12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 RTF1Q92541 710 aaKnown RBP12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
MSC-AS1-201ENST00000457356 NLRP6P59044 892 aa12.17□□□□□ -0.46
MSC-AS1-201ENST00000457356 RALBP1Q15311 655 aa12.17□□□□□ -0.46
MSC-AS1-201ENST00000457356 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
MSC-AS1-201ENST00000457356 FAM13BQ9NYF5 915 aa12.17□□□□□ -0.46
MSC-AS1-201ENST00000457356 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
MSC-AS1-201ENST00000457356 HFM1A2PYH4 1435 aa12.17□□□□□ -0.46
MSC-AS1-201ENST00000457356 CABP2Q9NPB3 220 aa12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 ERBINQ96RT1 1412 aa12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 XPCQ01831 940 aaPredicted RBP12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 NFKBIBQ15653 356 aa12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 FOXD4L6Q3SYB3 417 aaPredicted RBP12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 FOXD4L3Q6VB84 417 aaPredicted RBP12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 NLRP13Q86W25 1043 aa12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 CRBNQ96SW2 442 aa12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 BCL2L13Q9BXK5 485 aa12.16□□□□□ -0.46
MSC-AS1-201ENST00000457356 MCCP23508 829 aa12.15□□□□□ -0.46
MSC-AS1-201ENST00000457356 ABTB2Q8N961 1025 aa12.15□□□□□ -0.46
MSC-AS1-201ENST00000457356 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
MSC-AS1-201ENST00000457356 SYCP2Q9BX26 1530 aa12.14□□□□□ -0.47
MSC-AS1-201ENST00000457356 NCKAP5LQ9HCH0 1330 aa12.14□□□□□ -0.47
MSC-AS1-201ENST00000457356 IPO8O15397 1037 aaKnown RBP12.14□□□□□ -0.47
MSC-AS1-201ENST00000457356 ZMYM3Q14202 1370 aa12.14□□□□□ -0.47
MSC-AS1-201ENST00000457356 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
MSC-AS1-201ENST00000457356 NCOA1Q15788 1441 aa12.14□□□□□ -0.47
MSC-AS1-201ENST00000457356 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms