RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 TXNDC2Q86VQ3 553 aa29.95■■■□□ 2.39
FAM3A-217ENST00000457212 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.95■■■□□ 2.39
FAM3A-217ENST00000457212 RPGRIP1LQ68CZ1 1315 aa29.95■■■□□ 2.38
FAM3A-217ENST00000457212 NCKAP5LQ9HCH0 1330 aa29.94■■■□□ 2.38
FAM3A-217ENST00000457212 LTKP29376 864 aa29.92■■■□□ 2.38
FAM3A-217ENST00000457212 DMRT2Q9Y5R5 561 aa29.92■■■□□ 2.38
FAM3A-217ENST00000457212 MED14O60244 1454 aa29.91■■■□□ 2.38
FAM3A-217ENST00000457212 NEXMIFQ5QGS0 1516 aa29.9■■■□□ 2.38
FAM3A-217ENST00000457212 RGL3Q3MIN7 710 aa29.89■■■□□ 2.38
FAM3A-217ENST00000457212 CLSPNQ9HAW4 1339 aa29.89■■■□□ 2.38
FAM3A-217ENST00000457212 PPP1R15AO75807 674 aaPredicted RBP29.87■■■□□ 2.37
FAM3A-217ENST00000457212 NPHP4O75161 1426 aaPredicted RBP29.87■■■□□ 2.37
FAM3A-217ENST00000457212 PPLO60437 1756 aa29.85■■■□□ 2.37
FAM3A-217ENST00000457212 SIN3AQ96ST3 1273 aa29.84■■■□□ 2.37
FAM3A-217ENST00000457212 IFT172Q9UG01 1749 aa29.83■■■□□ 2.37
FAM3A-217ENST00000457212 IQGAP1P46940 1657 aa29.83■■■□□ 2.37
FAM3A-217ENST00000457212 PLEKHG1Q9ULL1 1385 aa29.83■■■□□ 2.37
FAM3A-217ENST00000457212 VGFO15240 615 aaPredicted RBP29.83■■■□□ 2.37
FAM3A-217ENST00000457212 CCER1Q8TC90 406 aaPredicted RBP29.82■■■□□ 2.36
FAM3A-217ENST00000457212 NUTM2DQ5VT03 806 aaPredicted RBP29.81■■■□□ 2.36
FAM3A-217ENST00000457212 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
FAM3A-217ENST00000457212 STAC3Q96MF2 364 aa29.79■■■□□ 2.36
FAM3A-217ENST00000457212 MYOM2P54296 1465 aa29.75■■■□□ 2.35
FAM3A-217ENST00000457212 BCANQ96GW7 911 aa29.75■■■□□ 2.35
FAM3A-217ENST00000457212 SETBP1Q9Y6X0 1596 aa29.73■■■□□ 2.35
FAM3A-217ENST00000457212 DCAF11Q8TEB1 546 aa29.72■■■□□ 2.35
FAM3A-217ENST00000457212 DIP2AQ14689 1571 aa29.7■■■□□ 2.35
FAM3A-217ENST00000457212 ADGRF5Q8IZF2 1346 aa29.7■■■□□ 2.34
FAM3A-217ENST00000457212 NRXN1Q9ULB1 1477 aa29.69■■■□□ 2.34
FAM3A-217ENST00000457212 ADAMTS13Q76LX8 1427 aa29.69■■■□□ 2.34
FAM3A-217ENST00000457212 NRXN3Q9Y4C0 1643 aa29.68■■■□□ 2.34
FAM3A-217ENST00000457212 TBX22Q9Y458 520 aa29.68■■■□□ 2.34
FAM3A-217ENST00000457212 TONSLQ96HA7 1378 aa29.67■■■□□ 2.34
FAM3A-217ENST00000457212 L3MBTL2Q969R5 705 aa29.67■■■□□ 2.34
FAM3A-217ENST00000457212 SLC26A8Q96RN1 970 aa29.67■■■□□ 2.34
FAM3A-217ENST00000457212 PIK3C2GO75747 1445 aa29.66■■■□□ 2.34
FAM3A-217ENST00000457212 KDM2AQ9Y2K7 1162 aa29.66■■■□□ 2.34
FAM3A-217ENST00000457212 SENP3Q9H4L4 574 aaPredicted RBP29.64■■■□□ 2.34
FAM3A-217ENST00000457212 TIMELESSQ9UNS1 1208 aa29.62■■■□□ 2.33
FAM3A-217ENST00000457212 PIK3R4Q99570 1358 aa29.61■■■□□ 2.33
FAM3A-217ENST00000457212 ALKQ9UM73 1620 aa29.6■■■□□ 2.33
FAM3A-217ENST00000457212 LAMC1P11047 1609 aa29.59■■■□□ 2.33
FAM3A-217ENST00000457212 SETD1AO15047 1707 aaKnown RBP29.57■■■□□ 2.32
FAM3A-217ENST00000457212 C14orf93Q9H972 538 aaKnown RBP29.56■■■□□ 2.32
FAM3A-217ENST00000457212 ZNF335Q9H4Z2 1342 aaPredicted RBP29.55■■■□□ 2.32
FAM3A-217ENST00000457212 PRAG1Q86YV5 1406 aa29.54■■■□□ 2.32
FAM3A-217ENST00000457212 CHD2O14647 1828 aaKnown RBP29.53■■■□□ 2.32
FAM3A-217ENST00000457212 KCNA6P17658 529 aa29.53■■■□□ 2.32
FAM3A-217ENST00000457212 METP08581 1390 aa29.52■■■□□ 2.32
FAM3A-217ENST00000457212 CFAP70Q5T0N1 1121 aa29.51■■■□□ 2.31
FAM3A-217ENST00000457212 NWD1Q149M9 1564 aa29.51■■■□□ 2.31
FAM3A-217ENST00000457212 KIAA1210Q9ULL0 1709 aa29.5■■■□□ 2.31
FAM3A-217ENST00000457212 CPS1P31327 1500 aa29.5■■■□□ 2.31
FAM3A-217ENST00000457212 LTBP4Q8N2S1 1624 aa29.49■■■□□ 2.31
FAM3A-217ENST00000457212 STRCP1A6NGW2 1772 aa29.47■■■□□ 2.31
FAM3A-217ENST00000457212 NKTRP30414 1462 aaKnown RBP29.46■■■□□ 2.31
FAM3A-217ENST00000457212 PTPRUQ92729 1446 aa29.45■■■□□ 2.31
FAM3A-217ENST00000457212 AMOTL2Q9Y2J4 779 aa29.45■■■□□ 2.31
FAM3A-217ENST00000457212 ASXL1Q8IXJ9 1541 aa29.45■■■□□ 2.3
FAM3A-217ENST00000457212 XRN1Q8IZH2 1706 aaKnown RBP29.44■■■□□ 2.3
FAM3A-217ENST00000457212 ADGRB1O14514 1584 aa29.42■■■□□ 2.3
FAM3A-217ENST00000457212 LRPPRCP42704 1394 aaKnown RBP29.41■■■□□ 2.3
FAM3A-217ENST00000457212 TMEM132EQ6IEE7 984 aa29.41■■■□□ 2.3
FAM3A-217ENST00000457212 TRPM1Q7Z4N2 1603 aa29.4■■■□□ 2.3
FAM3A-217ENST00000457212 YTHDC2Q9H6S0 1430 aaKnown RBP29.39■■■□□ 2.3
FAM3A-217ENST00000457212 NBPF8Q3BBV2 869 aa29.39■■■□□ 2.3
FAM3A-217ENST00000457212 ABCC11Q96J66 1382 aa29.38■■■□□ 2.29
FAM3A-217ENST00000457212 TECPR2O15040 1411 aa29.37■■■□□ 2.29
FAM3A-217ENST00000457212 KNDC1Q76NI1 1749 aa29.37■■■□□ 2.29
FAM3A-217ENST00000457212 LRRC7Q96NW7 1537 aa29.36■■■□□ 2.29
FAM3A-217ENST00000457212 PROSER2Q86WR7 435 aaPredicted RBP29.36■■■□□ 2.29
FAM3A-217ENST00000457212 PTCH1Q13635 1447 aa29.36■■■□□ 2.29
FAM3A-217ENST00000457212 STK26Q9P289 416 aa29.34■■■□□ 2.29
FAM3A-217ENST00000457212 NBPF1Q3BBV0 1214 aa29.33■■■□□ 2.29
FAM3A-217ENST00000457212 RALGAPBQ86X10 1494 aa29.32■■■□□ 2.28
FAM3A-217ENST00000457212 SIRT1Q96EB6 747 aa29.32■■■□□ 2.28
FAM3A-217ENST00000457212 IQSEC2Q5JU85 1478 aa29.31■■■□□ 2.28
FAM3A-217ENST00000457212 NCOA3Q9Y6Q9 1424 aa29.31■■■□□ 2.28
FAM3A-217ENST00000457212 ROCK2O75116 1388 aaKnown RBP29.31■■■□□ 2.28
FAM3A-217ENST00000457212 CERKQ8TCT0 537 aa29.31■■■□□ 2.28
FAM3A-217ENST00000457212 DLC1Q96QB1 1528 aa29.3■■■□□ 2.28
FAM3A-217ENST00000457212 TMEM94Q12767 1356 aa29.3■■■□□ 2.28
FAM3A-217ENST00000457212 GPRASP1Q5JY77 1395 aa29.29■■■□□ 2.28
FAM3A-217ENST00000457212 ROBO2Q9HCK4 1378 aa29.29■■■□□ 2.28
FAM3A-217ENST00000457212 FAM135BQ49AJ0 1406 aa29.28■■■□□ 2.28
FAM3A-217ENST00000457212 XIRP1Q702N8 1843 aaKnown RBP29.27■■■□□ 2.28
FAM3A-217ENST00000457212 TRAK1Q9UPV9 953 aa29.25■■■□□ 2.27
FAM3A-217ENST00000457212 RBM33Q96EV2 1170 aaKnown RBP29.21■■■□□ 2.27
FAM3A-217ENST00000457212 CARD11Q9BXL7 1154 aa29.21■■■□□ 2.27
FAM3A-217ENST00000457212 ARHGEF28Q8N1W1 1705 aaKnown RBP29.2■■■□□ 2.27
FAM3A-217ENST00000457212 WAPLQ7Z5K2 1190 aa29.19■■■□□ 2.26
FAM3A-217ENST00000457212 C14orf37Q86TY3 774 aa29.19■■■□□ 2.26
FAM3A-217ENST00000457212 PRAM1Q96QH2 718 aa29.19■■■□□ 2.26
FAM3A-217ENST00000457212 POGKQ9P215 609 aa29.19■■■□□ 2.26
FAM3A-217ENST00000457212 MSH6P52701 1360 aa29.18■■■□□ 2.26
FAM3A-217ENST00000457212 ADGRL3Q9HAR2 1447 aa29.18■■■□□ 2.26
FAM3A-217ENST00000457212 C19orf44Q9H6X5 657 aa29.17■■■□□ 2.26
FAM3A-217ENST00000457212 PLEKHH1Q9ULM0 1364 aa29.16■■■□□ 2.26
FAM3A-217ENST00000457212 EIF3AQ14152 1382 aaKnown RBP29.15■■■□□ 2.26
FAM3A-217ENST00000457212 NALCNQ8IZF0 1738 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms