RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PPP4R2Q9NY27 417 aa10.27□□□□□ -0.77
HDAC9-218ENST00000456174 DIP2CQ9Y2E4 1556 aa10.27□□□□□ -0.77
HDAC9-218ENST00000456174 RALGAPBQ86X10 1494 aa10.27□□□□□ -0.77
HDAC9-218ENST00000456174 POLR1AO95602 1720 aaPredicted RBP10.27□□□□□ -0.77
HDAC9-218ENST00000456174 RGL3Q3MIN7 710 aa10.27□□□□□ -0.77
HDAC9-218ENST00000456174 PTPRTO14522 1441 aa10.26□□□□□ -0.77
HDAC9-218ENST00000456174 SPATA31E1Q6ZUB1 1445 aa10.26□□□□□ -0.77
HDAC9-218ENST00000456174 EFCAB6Q5THR3 1501 aa10.26□□□□□ -0.77
HDAC9-218ENST00000456174 VSIG10Q8N0Z9 540 aa10.25□□□□□ -0.77
HDAC9-218ENST00000456174 CLTCL1P53675 1640 aa10.25□□□□□ -0.77
HDAC9-218ENST00000456174 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
HDAC9-218ENST00000456174 LMTK2Q8IWU2 1503 aa10.25□□□□□ -0.77
HDAC9-218ENST00000456174 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
HDAC9-218ENST00000456174 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
HDAC9-218ENST00000456174 GGT6Q6P531 493 aa10.23□□□□□ -0.77
HDAC9-218ENST00000456174 CFAP65Q6ZU64 1925 aaKnown RBP10.23□□□□□ -0.77
HDAC9-218ENST00000456174 USP47Q96K76 1375 aa10.23□□□□□ -0.77
HDAC9-218ENST00000456174 BRPF3Q9ULD4 1205 aa10.23□□□□□ -0.77
HDAC9-218ENST00000456174 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
HDAC9-218ENST00000456174 ANP32AP39687 249 aaKnown RBP10.22□□□□□ -0.77
HDAC9-218ENST00000456174 FAM43AQ8N2R8 423 aa10.22□□□□□ -0.77
HDAC9-218ENST00000456174 CARD11Q9BXL7 1154 aa10.22□□□□□ -0.77
HDAC9-218ENST00000456174 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-218ENST00000456174 KIF1BO60333 1816 aa10.22□□□□□ -0.77
HDAC9-218ENST00000456174 CCDC7Q96M83 1385 aa10.21□□□□□ -0.77
HDAC9-218ENST00000456174 CAMSAP1Q5T5Y3 1602 aa10.21□□□□□ -0.78
HDAC9-218ENST00000456174 ABCC3O15438 1527 aa10.21□□□□□ -0.78
HDAC9-218ENST00000456174 ROCK2O75116 1388 aaKnown RBP10.21□□□□□ -0.78
HDAC9-218ENST00000456174 HOMEZQ8IX15 550 aa10.2□□□□□ -0.78
HDAC9-218ENST00000456174 UGGT1Q9NYU2 1555 aa10.2□□□□□ -0.78
HDAC9-218ENST00000456174 ZC3H13Q5T200 1668 aaKnown RBP10.19□□□□□ -0.78
HDAC9-218ENST00000456174 NEURL4Q96JN8 1562 aa10.19□□□□□ -0.78
HDAC9-218ENST00000456174 ANP32CO43423 234 aa10.19□□□□□ -0.78
HDAC9-218ENST00000456174 LAMC1P11047 1609 aa10.19□□□□□ -0.78
HDAC9-218ENST00000456174 NPATQ14207 1427 aa10.19□□□□□ -0.78
HDAC9-218ENST00000456174 MADDQ8WXG6 1647 aa10.18□□□□□ -0.78
HDAC9-218ENST00000456174 KIF7Q2M1P5 1343 aa10.18□□□□□ -0.78
HDAC9-218ENST00000456174 FGD1P98174 961 aa10.18□□□□□ -0.78
HDAC9-218ENST00000456174 MROH2AA6NES4 1674 aa10.17□□□□□ -0.78
HDAC9-218ENST00000456174 NEFMP07197 916 aa10.17□□□□□ -0.78
HDAC9-218ENST00000456174 AAMPQ13685 434 aa10.17□□□□□ -0.78
HDAC9-218ENST00000456174 NBPF1Q3BBV0 1214 aa10.17□□□□□ -0.78
HDAC9-218ENST00000456174 CNTLNQ9NXG0 1405 aa10.17□□□□□ -0.78
HDAC9-218ENST00000456174 GPRASP1Q5JY77 1395 aa10.17□□□□□ -0.78
HDAC9-218ENST00000456174 SIGLEC1Q9BZZ2 1709 aa10.17□□□□□ -0.78
HDAC9-218ENST00000456174 STAC3Q96MF2 364 aa10.17□□□□□ -0.78
HDAC9-218ENST00000456174 IFT172Q9UG01 1749 aa10.16□□□□□ -0.78
HDAC9-218ENST00000456174 REREQ9P2R6 1566 aa10.16□□□□□ -0.78
HDAC9-218ENST00000456174 ST20-MTHFSA0A0A6YYL1 179 aa10.16□□□□□ -0.78
HDAC9-218ENST00000456174 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-218ENST00000456174 PPM1GO15355 546 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-218ENST00000456174 COL17A1Q9UMD9 1497 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-218ENST00000456174 ARID4BQ4LE39 1312 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-218ENST00000456174 RRP9O43818 475 aaKnown RBP10.15□□□□□ -0.79
HDAC9-218ENST00000456174 PDE4CQ08493 712 aa10.14□□□□□ -0.79
HDAC9-218ENST00000456174 GSE1Q14687 1217 aa10.14□□□□□ -0.79
HDAC9-218ENST00000456174 ADGRB3O60242 1522 aa10.14□□□□□ -0.79
HDAC9-218ENST00000456174 RBM10P98175 930 aaKnown RBP10.13□□□□□ -0.79
HDAC9-218ENST00000456174 MAPK8IP2Q13387 824 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-218ENST00000456174 KIAA1210Q9ULL0 1709 aa10.13□□□□□ -0.79
HDAC9-218ENST00000456174 NOS1P29475 1434 aa10.13□□□□□ -0.79
HDAC9-218ENST00000456174 ARHGAP31Q2M1Z3 1444 aa10.13□□□□□ -0.79
HDAC9-218ENST00000456174 IRX6P78412 446 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-218ENST00000456174 POLR3GLQ9BT43 218 aa10.13□□□□□ -0.79
HDAC9-218ENST00000456174 AGLP35573 1532 aa10.13□□□□□ -0.79
HDAC9-218ENST00000456174 ARHGEF40Q8TER5 1519 aa10.13□□□□□ -0.79
HDAC9-218ENST00000456174 SYNMO15061 1565 aa10.13□□□□□ -0.79
HDAC9-218ENST00000456174 PIK3C2BO00750 1634 aa10.12□□□□□ -0.79
HDAC9-218ENST00000456174 PPLO60437 1756 aa10.12□□□□□ -0.79
HDAC9-218ENST00000456174 IQGAP1P46940 1657 aa10.12□□□□□ -0.79
HDAC9-218ENST00000456174 PREX1Q8TCU6 1659 aa10.12□□□□□ -0.79
HDAC9-218ENST00000456174 MYOM2P54296 1465 aa10.12□□□□□ -0.79
HDAC9-218ENST00000456174 CHGAP10645 457 aaKnown RBP10.12□□□□□ -0.79
HDAC9-218ENST00000456174 CLTCQ00610 1675 aaKnown RBP10.1□□□□□ -0.79
HDAC9-218ENST00000456174 ADGRF5Q8IZF2 1346 aa10.09□□□□□ -0.79
HDAC9-218ENST00000456174 MYO5BQ9ULV0 1848 aa10.09□□□□□ -0.79
HDAC9-218ENST00000456174 NRXN1Q9ULB1 1477 aa10.09□□□□□ -0.79
HDAC9-218ENST00000456174 HSP90AA2PQ14568 343 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-218ENST00000456174 B4GALNT3Q6L9W6 998 aa10.08□□□□□ -0.8
HDAC9-218ENST00000456174 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
HDAC9-218ENST00000456174 TAOK2Q9UL54 1235 aa10.08□□□□□ -0.8
HDAC9-218ENST00000456174 TESK2Q96S53 571 aa10.08□□□□□ -0.8
HDAC9-218ENST00000456174 SCAF11Q99590 1463 aaKnown RBP10.08□□□□□ -0.8
HDAC9-218ENST00000456174 PDIA4P13667 645 aaKnown RBP10.07□□□□□ -0.8
HDAC9-218ENST00000456174 PRKRIP1Q9H875 184 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-218ENST00000456174 RPGRIP1LQ68CZ1 1315 aa10.07□□□□□ -0.8
HDAC9-218ENST00000456174 A0A0U1RQG5 324 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-218ENST00000456174 CFAP70Q5T0N1 1121 aa10.07□□□□□ -0.8
HDAC9-218ENST00000456174 SLC52A1Q9NWF4 448 aa10.07□□□□□ -0.8
HDAC9-218ENST00000456174 IDI1Q13907 227 aa10.06□□□□□ -0.8
HDAC9-218ENST00000456174 MLECQ14165 292 aa10.06□□□□□ -0.8
HDAC9-218ENST00000456174 DISP3Q9P2K9 1392 aa10.06□□□□□ -0.8
HDAC9-218ENST00000456174 ERVK-7P63135 1459 aa10.05□□□□□ -0.8
HDAC9-218ENST00000456174 FBXO31Q5XUX0 539 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-218ENST00000456174 TMEM131LA2VDJ0 1609 aa10.05□□□□□ -0.8
HDAC9-218ENST00000456174 NEXMIFQ5QGS0 1516 aa10.05□□□□□ -0.8
HDAC9-218ENST00000456174 TMF1P82094 1093 aa10.05□□□□□ -0.8
HDAC9-218ENST00000456174 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
HDAC9-218ENST00000456174 SETBP1Q9Y6X0 1596 aa10.05□□□□□ -0.8
HDAC9-218ENST00000456174 PIK3C2GO75747 1445 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms